Journal: BMC Genomics

Article Title: The core and unique proteins of haloarchaea

doi: 10.1186/1471-2164-13-39

Figure Lengend Snippet: World map showing the locations of isolation for haloarchaeal organisms with sequenced genomes . The organisms represent a significant geographical diversity of haloarchaeal isolates: [ Halobacterium sp. NRC-1 (NRC-1), the model haloarchaeal organism isolated from salted food in Canada, Haloarcula marismortui (Hma), a physiologically versatile extreme halophile from the Dead Sea, Natronomonas pharaonis (Nph), an alkaliphilic extreme halophile from an Egyptian soda lake, Haloquadratum walsbyi (Hwa), a square-shaped extreme halophile from solar salterns in Australia and Spain, Halorubrum lacusprofundi (Hla), a cold-adapted halophile from an Antarctic lake, Halogeometricum borinquense (Hbo), a pleomorphic extreme halophile from a solar saltern in Puerto Rico, Halomicrobium mukohataei (Hmu), a rod-shaped halophile from an Argentinean salt flat, Halorhabdus utahensis (Hut), a pleomorphic extreme halophile from sediments of the Great Salt Lake, USA, Haloferax volcanii (Hvo), a moderate halophile from Dead Sea mud, Haloterrigena turkmenica (Htu), a pleomorphic halophile from Turkmenistan, Natrialba magadii (Nma), an alkaliphilic halophile from Lake Magadi, Kenya, Halalkalicoccus jeotgali (Hje), extreme halophile from Korean fermented seafood, and Halopiger xanaduensis (Hxa), extreme halophile from saline Lake Shangmatala, China. Labels are based on the color of haloarchaeal colonies.

Article Snippet: Nucleotide and protein sequences were obtained for completed haloarchaeal genomes from NCBI: Halobacterium sp. NRC-1 ATCC 700922 (NRC-1) [ ], Haloarcula marismortui ATCC 43049 (Hma) [ ], Natronomonas pharaonis DSM 2160 (Nph) [ ], Haloquadratum walsbyi DSM 16790 (Hwa) [ ], Halorubrum lacusprofundi ATCC 49239 (Hla) [ ], Halogeometricum borinquense DSM 11551 (Hbo) [ ], Halomicrobium mukohataei DSM 12286 (Hmu) [ ], Halorhabdus utahensis DSM 12940 (Hut) [ ], Haloferax volcanii DS2 (Hvo) [ ], Haloterrigena turkmenica DSM 5511 (Htu) [ ], Natrialba magadii ATCC 43099 (Nma) [ ], Halalkalicoccus jeotgali B3 (Hje) [ ], and Halopiger xanaduensis SH-6 (Hxa) [ ].

Techniques: Isolation

Journal: BMC Genomics

Article Title: The core and unique proteins of haloarchaea

doi: 10.1186/1471-2164-13-39

Figure Lengend Snippet: Nine haloarchaeal organisms used to identify HOGs.

Article Snippet: Nucleotide and protein sequences were obtained for completed haloarchaeal genomes from NCBI: Halobacterium sp. NRC-1 ATCC 700922 (NRC-1) [ ], Haloarcula marismortui ATCC 43049 (Hma) [ ], Natronomonas pharaonis DSM 2160 (Nph) [ ], Haloquadratum walsbyi DSM 16790 (Hwa) [ ], Halorubrum lacusprofundi ATCC 49239 (Hla) [ ], Halogeometricum borinquense DSM 11551 (Hbo) [ ], Halomicrobium mukohataei DSM 12286 (Hmu) [ ], Halorhabdus utahensis DSM 12940 (Hut) [ ], Haloferax volcanii DS2 (Hvo) [ ], Haloterrigena turkmenica DSM 5511 (Htu) [ ], Natrialba magadii ATCC 43099 (Nma) [ ], Halalkalicoccus jeotgali B3 (Hje) [ ], and Halopiger xanaduensis SH-6 (Hxa) [ ].

Techniques: