hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and <t>Hoechst</t> <t>33342</t> ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
    Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "HNF4α Acts as Upstream Functional Regulator of Intestinal Wnt3 and Paneth Cell Fate"

    Article Title: HNF4α Acts as Upstream Functional Regulator of Intestinal Wnt3 and Paneth Cell Fate

    Journal: Cellular and Molecular Gastroenterology and Hepatology

    doi: 10.1016/j.jcmgh.2022.11.010

    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and Hoechst 33342 ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
    Figure Legend Snippet: Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and Hoechst 33342 ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).

    Techniques Used: Co-Culture Assay, Staining, Imaging, Confocal Microscopy, RNA Sequencing Assay, Software

    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and <t>Hoechst</t> <t>33342</t> ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
    Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "HNF4α Acts as Upstream Functional Regulator of Intestinal Wnt3 and Paneth Cell Fate"

    Article Title: HNF4α Acts as Upstream Functional Regulator of Intestinal Wnt3 and Paneth Cell Fate

    Journal: Cellular and Molecular Gastroenterology and Hepatology

    doi: 10.1016/j.jcmgh.2022.11.010

    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and Hoechst 33342 ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
    Figure Legend Snippet: Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and Hoechst 33342 ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).

    Techniques Used: Co-Culture Assay, Staining, Imaging, Confocal Microscopy, RNA Sequencing Assay, Software

    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
    Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
    The growth rate of CCA cells in 2D and 3D cultures. (A) The growth rate of CCA cells in 2D culture as determined by cell counting. The cell numbers were counted every 24 h. Black circle and grey square represent KKU-100 and KKU-213A cells, respectively. (B) The growth rate of CCA cells in 3D culture as determined by diameter measurement. The diameter was measured every 24 h. Black circle and grey square represent KKU-100 and KKU-213A cells, respectively. The data represent means and ± standard error. (C) The tumor spheroid morphologies of KKU-100 and KKU-213A cells in 3D Matrigel-overlayed culture. The images were taken every 2 days using a phase-contrast microscope. The scale bars represent 100 µm. (D) Cellular organization of CCA spheroids. KKU-100 and KKU-213A cells were grown in 3D culture for 6 days. The CCA spheroids were permeabilized, blocked and subsequently stained with <t>Hoechst</t> <t>33342</t> for nucleus and TRITC-phalloidin for F-actin. Their structures were observed under a confocal microscope and Z-stack images were obtained. Red represents F-actin and blue represents nuclei. The scale bars represent 100 μm.
    Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Images

    1) Product Images from "Distinct cholangiocarcinoma cell migration in 2D monolayer and 3D spheroid culture based on galectin-3 expression and localization"

    Article Title: Distinct cholangiocarcinoma cell migration in 2D monolayer and 3D spheroid culture based on galectin-3 expression and localization

    Journal: Frontiers in Oncology

    doi: 10.3389/fonc.2022.999158

    The growth rate of CCA cells in 2D and 3D cultures. (A) The growth rate of CCA cells in 2D culture as determined by cell counting. The cell numbers were counted every 24 h. Black circle and grey square represent KKU-100 and KKU-213A cells, respectively. (B) The growth rate of CCA cells in 3D culture as determined by diameter measurement. The diameter was measured every 24 h. Black circle and grey square represent KKU-100 and KKU-213A cells, respectively. The data represent means and ± standard error. (C) The tumor spheroid morphologies of KKU-100 and KKU-213A cells in 3D Matrigel-overlayed culture. The images were taken every 2 days using a phase-contrast microscope. The scale bars represent 100 µm. (D) Cellular organization of CCA spheroids. KKU-100 and KKU-213A cells were grown in 3D culture for 6 days. The CCA spheroids were permeabilized, blocked and subsequently stained with Hoechst 33342 for nucleus and TRITC-phalloidin for F-actin. Their structures were observed under a confocal microscope and Z-stack images were obtained. Red represents F-actin and blue represents nuclei. The scale bars represent 100 μm.
    Figure Legend Snippet: The growth rate of CCA cells in 2D and 3D cultures. (A) The growth rate of CCA cells in 2D culture as determined by cell counting. The cell numbers were counted every 24 h. Black circle and grey square represent KKU-100 and KKU-213A cells, respectively. (B) The growth rate of CCA cells in 3D culture as determined by diameter measurement. The diameter was measured every 24 h. Black circle and grey square represent KKU-100 and KKU-213A cells, respectively. The data represent means and ± standard error. (C) The tumor spheroid morphologies of KKU-100 and KKU-213A cells in 3D Matrigel-overlayed culture. The images were taken every 2 days using a phase-contrast microscope. The scale bars represent 100 µm. (D) Cellular organization of CCA spheroids. KKU-100 and KKU-213A cells were grown in 3D culture for 6 days. The CCA spheroids were permeabilized, blocked and subsequently stained with Hoechst 33342 for nucleus and TRITC-phalloidin for F-actin. Their structures were observed under a confocal microscope and Z-stack images were obtained. Red represents F-actin and blue represents nuclei. The scale bars represent 100 μm.

    Techniques Used: Cell Counting, Microscopy, Staining

    Localization of galectin-3 in 2D and 3D CCA cells. CCA cells were cultured as monolayer and spheroids for 10 days before harvesting for the immunofluorescence. CCA cells were fixed, permeabilized and blocked before staining with galectin-3 antibody (green). TRITC-phalloidin and Hoechst 33342 were used as counterstains for F-actin (red) and nuclei (blue), respectively. The tumor spheroid images were taken under a confocal microscope using 60x and 120x magnifications. The scale bars in 2D and 3D systems indicate 25 µm and 10 µm, respectively.
    Figure Legend Snippet: Localization of galectin-3 in 2D and 3D CCA cells. CCA cells were cultured as monolayer and spheroids for 10 days before harvesting for the immunofluorescence. CCA cells were fixed, permeabilized and blocked before staining with galectin-3 antibody (green). TRITC-phalloidin and Hoechst 33342 were used as counterstains for F-actin (red) and nuclei (blue), respectively. The tumor spheroid images were taken under a confocal microscope using 60x and 120x magnifications. The scale bars in 2D and 3D systems indicate 25 µm and 10 µm, respectively.

    Techniques Used: Cell Culture, Immunofluorescence, Staining, Microscopy

    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
    Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    dna content  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc dna content
    Dna Content, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    hoechst 33 342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33 342
    Hoechst 33 342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    dye hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc dye hoechst 33342
    Representative images are shown for activated caspase-3 (first column) and corresponding DNA staining with <t>Hoechst</t> <t>33342</t> (second column). To control for unspecific staining, CC-3 antibody was substituted by IgG antibody (third column) and shown with the corresponding Hoechst 33342 staining (fourth column). Original magnification 400×.
    Dye Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    1) Product Images from "Zinc Oxide Nanoparticles Induce Necrosis and Apoptosis in Macrophages in a p47phox- and Nrf2-Independent Manner"

    Article Title: Zinc Oxide Nanoparticles Induce Necrosis and Apoptosis in Macrophages in a p47phox- and Nrf2-Independent Manner

    Journal: PLoS ONE

    doi: 10.1371/journal.pone.0065704

    Representative images are shown for activated caspase-3 (first column) and corresponding DNA staining with Hoechst 33342 (second column). To control for unspecific staining, CC-3 antibody was substituted by IgG antibody (third column) and shown with the corresponding Hoechst 33342 staining (fourth column). Original magnification 400×.
    Figure Legend Snippet: Representative images are shown for activated caspase-3 (first column) and corresponding DNA staining with Hoechst 33342 (second column). To control for unspecific staining, CC-3 antibody was substituted by IgG antibody (third column) and shown with the corresponding Hoechst 33342 staining (fourth column). Original magnification 400×.

    Techniques Used: Staining

    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
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    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
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    hoechst 33342  (Cell Signaling Technology Inc)


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    Cell Signaling Technology Inc hoechst 33342
    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and <t>Hoechst</t> <t>33342</t> ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
    Hoechst 33342, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Cell Signaling Technology Inc dna content
    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and <t>Hoechst</t> <t>33342</t> ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
    Dna Content, supplied by Cell Signaling Technology Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and <t>Hoechst</t> <t>33342</t> ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).
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    Cell Signaling Technology Inc dye hoechst 33342
    Representative images are shown for activated caspase-3 (first column) and corresponding DNA staining with <t>Hoechst</t> <t>33342</t> (second column). To control for unspecific staining, CC-3 antibody was substituted by IgG antibody (third column) and shown with the corresponding Hoechst 33342 staining (fourth column). Original magnification 400×.
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    Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and Hoechst 33342 ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).

    Journal: Cellular and Molecular Gastroenterology and Hepatology

    Article Title: HNF4α Acts as Upstream Functional Regulator of Intestinal Wnt3 and Paneth Cell Fate

    doi: 10.1016/j.jcmgh.2022.11.010

    Figure Lengend Snippet: Human primary mesenchymal cells rescue Hnf4a Δ IEC jejunal growth in culture. ( A ) Crypts from control and Hnf4a Δ IEC mice were maintained in culture, with or without human mesenchymal cells. They were kept under culture for 5 days, and images were acquired each day using a Zeiss Celldiscoverer 7. Representative images of 2 independent technical replicates at 2 different original magnifications (2.5× and 20×) are shown. Scale bar = 500 μm for 2.5× magnification and 50 μm for 20× magnification. ( B ) Live co-culture sample stained at day 5 using CellMask Deep Red Plasma Membrane Stain ( red ) and Hoechst 33342 ( blue ). Three-dimensional imaging was performed using confocal microscopy. One enteroid surrounded by mesenchymal cells is shown. White dashed box emphasizes a mesenchymal cell that displays elongated telopods in close contact with epithelial cells ( white arrows ). ( C ) Areas (pixel ) of jejunal enteroid size were assessed using ImageJ and expressed as percentage of control enteroids (∗∗∗∗ P ≤ .0001). Mixed-species RNA-seq data obtained were analyzed using GSEA software for comparison with Paneth cell gene signature ( D ), goblet cell and tuft cell gene signatures ( E ), ISC gene signature ( F ), as well as differentiated and progenitor enterocyte gene signatures ( G ).

    Article Snippet: First, 5-day-old co-cultures were labeled with Hoechst 33342 (Cell Signaling Technology, New England Biolabs) for 15 minutes at 37°C, followed by incubation with CellMask Deep Red Plasma Membrane Stain (Invitrogen) for 10 minutes at 37°C.

    Techniques: Co-Culture Assay, Staining, Imaging, Confocal Microscopy, RNA Sequencing Assay, Software

    Representative images are shown for activated caspase-3 (first column) and corresponding DNA staining with Hoechst 33342 (second column). To control for unspecific staining, CC-3 antibody was substituted by IgG antibody (third column) and shown with the corresponding Hoechst 33342 staining (fourth column). Original magnification 400×.

    Journal: PLoS ONE

    Article Title: Zinc Oxide Nanoparticles Induce Necrosis and Apoptosis in Macrophages in a p47phox- and Nrf2-Independent Manner

    doi: 10.1371/journal.pone.0065704

    Figure Lengend Snippet: Representative images are shown for activated caspase-3 (first column) and corresponding DNA staining with Hoechst 33342 (second column). To control for unspecific staining, CC-3 antibody was substituted by IgG antibody (third column) and shown with the corresponding Hoechst 33342 staining (fourth column). Original magnification 400×.

    Article Snippet: Nuclear staining was performed by using the dye Hoechst 33342 (Cell Signaling) in a final concentration of 1 µg/ml in PBS for 15 min at 37°C in a humid box.

    Techniques: Staining