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Tajima Shoji Co Ltd vcftools software version 0 1 16
Vcftools Software Version 0 1 16, supplied by Tajima Shoji Co Ltd, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/vcftools+program/vcftools/pm41163571-70-8-36
Average 86 stars, based on 1 article reviews
vcftools software version 0 1 16 - by Bioz Stars, 2026-11
86/100 stars

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Related Articles

Software:

Article Title: Conservation genetics and genetic vulnerability of Craigia yunnanensis (Malvaceae), a relict plant species with extremely small populations from Southwest China.
Article Snippet: .. The statistic of Tajima's D determined utilizing the vcftools software version 0.1.16, applying a 20 95% confidence interval ranging from -1.795 to 2.052, to assess neutrality across all loci and to identify 21 sites under selection (Tajima, 1989; Danecek et al., 2011). ..

Selection:

Article Title: Conservation genetics and genetic vulnerability of Craigia yunnanensis (Malvaceae), a relict plant species with extremely small populations from Southwest China.
Article Snippet: .. The statistic of Tajima's D determined utilizing the vcftools software version 0.1.16, applying a 20 95% confidence interval ranging from -1.795 to 2.052, to assess neutrality across all loci and to identify 21 sites under selection (Tajima, 1989; Danecek et al., 2011). ..

Article Title: The genomic basis of plumage polymorphism in the Eastern Screech-Owl (Megascops asio).
Article Snippet: Understanding the genetic basis of polymorphic traits is useful for exploring the origin and maintenance of variable phenotypes.. Previous work on color polymorphism in birds has evolved from targeting candidate genes to whole-genome scans, consequently revealing the often-complex genomic architecture underlying polymorphic coloration.. The Eastern Screech-Owl ( Megascops asio ) is a small North American polymorphic forest owl in which both gray and rufous plumage morphs are common across much of its range.

GWAS:

Article Title: The genomic basis of plumage polymorphism in the Eastern Screech-Owl (Megascops asio).
Article Snippet: Understanding the genetic basis of polymorphic traits is useful for exploring the origin and maintenance of variable phenotypes.. Previous work on color polymorphism in birds has evolved from targeting candidate genes to whole-genome scans, consequently revealing the often-complex genomic architecture underlying polymorphic coloration.. The Eastern Screech-Owl ( Megascops asio ) is a small North American polymorphic forest owl in which both gray and rufous plumage morphs are common across much of its range.

Generated:

Article Title: Genomic Footprints of Bottlenecks, Isolation, and Inbreeding: A Case Study of Two Vulture Cohorts in India
Article Snippet: .. We employed two complementary approaches to evaluate Tajima’s D from the final filtered VCF (86,140 SNPs): a) non-overlapping windows computed directly with vcftools (--Tajima D) for the full dataset, and b) sliding (50% overlap) windows generated with bedtools ( ) and evaluated per-window by extricating the regions with bcftools and running vcftools – TajimaD on each region. ..



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