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CombiMatrix microarray platform tomatoarray
Microarray Platform Tomatoarray, supplied by CombiMatrix, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tomato+tom1+microarray/microarray+platform+tomatoarray/pmc03621443-29-17-18
Average 90 stars, based on 1 article reviews
microarray platform tomatoarray - by Bioz Stars, 2026-10
90/100 stars

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Microarray:

Article Title: Current challenges and future potential of tomato breeding using omics approaches
Article Snippet: .. In the tomato, many types of microarray platforms, including TOM1, TOM2, Affymetrix GeneChip, Agilent custom array and TomatoArray (COMBIMATRIX), have enabled the investigation of responses to several stress conditions ( Cantu et al. 2009 , Khodakovskaya et al. 2011 , Sun et al. 2010 ), the comparison of the expression profiles of wild-type and transgenic or mutant plants ( Kumar et al. 2012 , Martinelli et al. 2009 , Nashilevitz et al. 2010 , Povero et al. 2011 ) and the study of host-pathogen interactions ( Alkan et al. 2012 , Balaji et al. 2008 , Owens et al. 2012 ). .. Archives of these comprehensive databases are in public repositories like NCBI GEO ( Barrett et al. 2009 ) and ArrayExpress ( Parkinson et al. 2009 ). shows information about the collection of 393 Affymetrix tomato GeneChip data from NCBI GEO, ArrayExpress and TFGD ( Fei et al. 2011 ).

Comparison:

Article Title: Current challenges and future potential of tomato breeding using omics approaches
Article Snippet: .. In the tomato, many types of microarray platforms, including TOM1, TOM2, Affymetrix GeneChip, Agilent custom array and TomatoArray (COMBIMATRIX), have enabled the investigation of responses to several stress conditions ( Cantu et al. 2009 , Khodakovskaya et al. 2011 , Sun et al. 2010 ), the comparison of the expression profiles of wild-type and transgenic or mutant plants ( Kumar et al. 2012 , Martinelli et al. 2009 , Nashilevitz et al. 2010 , Povero et al. 2011 ) and the study of host-pathogen interactions ( Alkan et al. 2012 , Balaji et al. 2008 , Owens et al. 2012 ). .. Archives of these comprehensive databases are in public repositories like NCBI GEO ( Barrett et al. 2009 ) and ArrayExpress ( Parkinson et al. 2009 ). shows information about the collection of 393 Affymetrix tomato GeneChip data from NCBI GEO, ArrayExpress and TFGD ( Fei et al. 2011 ).

Expressing:

Article Title: Current challenges and future potential of tomato breeding using omics approaches
Article Snippet: .. In the tomato, many types of microarray platforms, including TOM1, TOM2, Affymetrix GeneChip, Agilent custom array and TomatoArray (COMBIMATRIX), have enabled the investigation of responses to several stress conditions ( Cantu et al. 2009 , Khodakovskaya et al. 2011 , Sun et al. 2010 ), the comparison of the expression profiles of wild-type and transgenic or mutant plants ( Kumar et al. 2012 , Martinelli et al. 2009 , Nashilevitz et al. 2010 , Povero et al. 2011 ) and the study of host-pathogen interactions ( Alkan et al. 2012 , Balaji et al. 2008 , Owens et al. 2012 ). .. Archives of these comprehensive databases are in public repositories like NCBI GEO ( Barrett et al. 2009 ) and ArrayExpress ( Parkinson et al. 2009 ). shows information about the collection of 393 Affymetrix tomato GeneChip data from NCBI GEO, ArrayExpress and TFGD ( Fei et al. 2011 ).

Transgenic Assay:

Article Title: Current challenges and future potential of tomato breeding using omics approaches
Article Snippet: .. In the tomato, many types of microarray platforms, including TOM1, TOM2, Affymetrix GeneChip, Agilent custom array and TomatoArray (COMBIMATRIX), have enabled the investigation of responses to several stress conditions ( Cantu et al. 2009 , Khodakovskaya et al. 2011 , Sun et al. 2010 ), the comparison of the expression profiles of wild-type and transgenic or mutant plants ( Kumar et al. 2012 , Martinelli et al. 2009 , Nashilevitz et al. 2010 , Povero et al. 2011 ) and the study of host-pathogen interactions ( Alkan et al. 2012 , Balaji et al. 2008 , Owens et al. 2012 ). .. Archives of these comprehensive databases are in public repositories like NCBI GEO ( Barrett et al. 2009 ) and ArrayExpress ( Parkinson et al. 2009 ). shows information about the collection of 393 Affymetrix tomato GeneChip data from NCBI GEO, ArrayExpress and TFGD ( Fei et al. 2011 ).

Mutagenesis:

Article Title: Current challenges and future potential of tomato breeding using omics approaches
Article Snippet: .. In the tomato, many types of microarray platforms, including TOM1, TOM2, Affymetrix GeneChip, Agilent custom array and TomatoArray (COMBIMATRIX), have enabled the investigation of responses to several stress conditions ( Cantu et al. 2009 , Khodakovskaya et al. 2011 , Sun et al. 2010 ), the comparison of the expression profiles of wild-type and transgenic or mutant plants ( Kumar et al. 2012 , Martinelli et al. 2009 , Nashilevitz et al. 2010 , Povero et al. 2011 ) and the study of host-pathogen interactions ( Alkan et al. 2012 , Balaji et al. 2008 , Owens et al. 2012 ). .. Archives of these comprehensive databases are in public repositories like NCBI GEO ( Barrett et al. 2009 ) and ArrayExpress ( Parkinson et al. 2009 ). shows information about the collection of 393 Affymetrix tomato GeneChip data from NCBI GEO, ArrayExpress and TFGD ( Fei et al. 2011 ).



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Boyce Thompson Institute for Plant Research Inc tomato microarrays tom1
Relative fold differences in the expression of selected tomato plant defense genes verified through qPCR analysis. Gene expression verified: PPO F, WIN1, WIN2, and PR-4. Tomato plants were nonwounded tomato plants (NW) or treated with viruliferous whiteflies carrying PepGMV (WF & V) or nonviruliferous whiteflies (WF). Leaf tissue was collected 15 d after treatment initiation for qPCR analysis. Bars indicate means ± SE. The relative fold differences correlated with the <t>microarrays</t> results as specified in .
Tomato Microarrays Tom1, supplied by Boyce Thompson Institute for Plant Research Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
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Boyce Thompson Institute for Plant Research Inc tomato tom1 microarray
Relative fold differences in the expression of selected tomato plant defense genes verified through qPCR analysis. Gene expression verified: PPO F, WIN1, WIN2, and PR-4. Tomato plants were nonwounded tomato plants (NW) or treated with viruliferous whiteflies carrying PepGMV (WF & V) or nonviruliferous whiteflies (WF). Leaf tissue was collected 15 d after treatment initiation for qPCR analysis. Bars indicate means ± SE. The relative fold differences correlated with the <t>microarrays</t> results as specified in .
Tomato Tom1 Microarray, supplied by Boyce Thompson Institute for Plant Research Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tomato+tom1+microarray/tom1+cdna+microarrays/pmc01949893-561-1-16
Average 90 stars, based on 1 article reviews
tomato tom1 microarray - by Bioz Stars, 2026-10
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Relative fold differences in the expression of selected tomato plant defense genes verified through qPCR analysis. Gene expression verified: PPO F, WIN1, WIN2, and PR-4. Tomato plants were nonwounded tomato plants (NW) or treated with viruliferous whiteflies carrying PepGMV (WF & V) or nonviruliferous whiteflies (WF). Leaf tissue was collected 15 d after treatment initiation for qPCR analysis. Bars indicate means ± SE. The relative fold differences correlated with the microarrays results as specified in .

Journal: Journal of Insect Science

Article Title: Microarray Analysis of Tomato Plants Exposed to the Nonviruliferous or Viruliferous Whitefly Vector Harboring Pepper golden mosaic virus

doi: 10.1093/jisesa/ieu092

Figure Lengend Snippet: Relative fold differences in the expression of selected tomato plant defense genes verified through qPCR analysis. Gene expression verified: PPO F, WIN1, WIN2, and PR-4. Tomato plants were nonwounded tomato plants (NW) or treated with viruliferous whiteflies carrying PepGMV (WF & V) or nonviruliferous whiteflies (WF). Leaf tissue was collected 15 d after treatment initiation for qPCR analysis. Bars indicate means ± SE. The relative fold differences correlated with the microarrays results as specified in .

Article Snippet: Tomato microarrays (TOM1, The Boyce Thompson Institute at Cornell University, Ithaca, NY) were hybridized at 65°C for 8 h. All treatments were dye reversed with Cy3 and Cy5 for a total of six microarray chips using a loop design for four biological replications for each treatment.

Techniques: Expressing, Gene Expression

Relative fold differences in the expression of selected tomato plant defense genes verified through qPCR analysis. Gene expression verified: (a) PPO F, PR-1A1, WIN1, WIN2; (b), arginase, dehydrin, GST, PI2Cev1, PI2Cev2, PR-4, and RuBisCO. Treatments are nonwounded (NW) and viruliferous whiteflies carrying PepGMV (WF & V). Leaf tissue was collected 15 d after treatment initiation for qPCR analysis. Bars indicate means ± SE. The relative fold differences matched the microarrays results as specified in .

Journal: Journal of Insect Science

Article Title: Microarray Analysis of Tomato Plants Exposed to the Nonviruliferous or Viruliferous Whitefly Vector Harboring Pepper golden mosaic virus

doi: 10.1093/jisesa/ieu092

Figure Lengend Snippet: Relative fold differences in the expression of selected tomato plant defense genes verified through qPCR analysis. Gene expression verified: (a) PPO F, PR-1A1, WIN1, WIN2; (b), arginase, dehydrin, GST, PI2Cev1, PI2Cev2, PR-4, and RuBisCO. Treatments are nonwounded (NW) and viruliferous whiteflies carrying PepGMV (WF & V). Leaf tissue was collected 15 d after treatment initiation for qPCR analysis. Bars indicate means ± SE. The relative fold differences matched the microarrays results as specified in .

Article Snippet: Tomato microarrays (TOM1, The Boyce Thompson Institute at Cornell University, Ithaca, NY) were hybridized at 65°C for 8 h. All treatments were dye reversed with Cy3 and Cy5 for a total of six microarray chips using a loop design for four biological replications for each treatment.

Techniques: Expressing, Gene Expression