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smart seq lysis buffer  (TaKaRa)


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    Structured Review

    TaKaRa smart seq lysis buffer
    Smart Seq Lysis Buffer, supplied by TaKaRa, used in various techniques. Bioz Stars score: 97/100, based on 3161 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/smart-seq+buffer/Lysis+Buffer/pmc13125632-359-15-23
    Average 97 stars, based on 3161 article reviews
    smart seq lysis buffer - by Bioz Stars, 2026-11
    97/100 stars

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    Related Articles

    Lysis:

    Article Title: Transmembrane PhoxID: photoproximity labelling across the plasma membrane in vivo
    Article Snippet: .. The soluble fractions were loaded onto TALON beads (Takara Bio) pre-equilibrated with the lysis buffer. ..

    Article Title: Cryo-EM structures of Mycobacterium tuberculosis pyruvate carboxylase reveal acetyl-CoA-mediated tetramer stabilization and carrier-domain coordination
    Article Snippet: Cell pellets were resuspended in lysis buffer (50mMHEPES, pH 7.5, 300mMNaCl, 1mMMgCl2, 5 mM imidazole, 5% (v/v) glycerol, and 3mM β-mercaptoethanol) supplemented with EDTAfree protease inhibitor cocktail (Roche) and 0.5mgmL−1 lysozyme and lysed by sonication. .. The lysate was clarified by centrifugation at 20,000 g for 30min, and the supernatant was loaded onto TALON metal affinity resin (Takara), washed extensively with lysis buffer containing 5mM imidazole, and eluted with lysis buffer supplemented with 200mM imidazole. ..

    Article Title: The circadian rhythm gene BHLHE40 regulates inflammation in asthma patients and promotes ferroptosis through PTGS2 and SERPINB2 in lung fibroblast cells
    Article Snippet: Cell extraction was mixed with RNA immunoprecipitation (RIP) buffer (Merck Millipore, Burlington, MA, USA) containing antibody-coupled sepharose beads coated with anti-BHLHE40, anti-PTGS2 or anti-IgG antibody. .. After overnight incubation at 4 °C, beads were washed with lysis buffer and the RNA was extracted using Trizol reagent (TaKaRa, Tokyo, Japan). ..

    Article Title: A pharynx-to-brain sensory pathway mediates swallowing-like behavior evoked by mechanical stimulation
    Article Snippet: .. Vagal ganglion neuron single-cell library preparation The vagal ganglion neuronswere placed in4μL lysis buffer (containing oligo-dT primer, Recombinant RNase inhibitor (TaKaRa, Cat # 2313 A), and 1% Triton X-100, dNTP mix). ..

    Article Title: Constructing nucleoside deaminase-assisted orthogonal DNA replication system for continuous evolution in prokaryotes.
    Article Snippet: Orthogonal DNA replication system-based continuous evolution enables user-defined genes to undergo a hypermutagenic evolutionary state through a replication process independent of the host genome, while maintaining overall cellular stability.. However, its application is constrained by the relatively low mutation rate of orthogonal error-prone DNA polymerases (ep-DNAP) and by strong mutation bias during misincorporation.. To address this, we developed nucleoside deaminase–assisted orthogonal DNA replication (NDAORep) systems, in which nucleoside deaminases (NDA) are coupled to orthogonal DNA replication to enhance and tune mutagenesis.

    Article Title: Acacetin alleviates pyroptosis, inflammatory response, and oxidative stress in renal tubular epithelial cells caused by kidney stone via targeting GPR35.
    Article Snippet: Nephrolithiasis, particularly calcium oxalate (CaOx) stones, remains a global health burden with limited pharmacological options for recurrence prevention.. In this study, we investigated the therapeutic mechanism of acacetin (ACA) using both in vitro (COM-stimulated HK-2 cells) and in vivo (glyoxylate-induced mice) models of CaOx kidney stone.. Our results demonstrated that ACA treatment dose-dependently attenuated renal injury, reduced the expression of pro-inflammatory cytokines (IL-1β, IL-6, and TNF-α), and activated the Nrf2/HO-1/ NQO1 antioxidant pathway.

    Article Title: Molecular signatures of genetically defined jugular nociceptors and their responses to allergic airway inflammation
    Article Snippet: .. Cells were sorted directly into lysis buffer (Takara, 635013) and shipped to Admera Health for library preparation and SMART-seq ( ). .. cDNAs were synthesized using the SMART-Seq v4 Ultra Low Input RNA Kit (Takara) which enables high-quality cDNA synthesis directly from sorted cells without RNA extraction.

    Article Title: Single-Cell RNA Sequencing Reveals Molecular Differences Underlying Meiotic Competence of Brilliant Cresyl Blue (BCB) Selected Alpaca Oocytes.
    Article Snippet: .. Finally, each oocyte was individually transferred in a final volume of 1 μL into a 0.2-mL tube containing 9.5 μL of lysis buffer provided in the SMART-Seq mRNA Kit (Takara, Shiga, Japan). ..

    Centrifugation:

    Article Title: Cryo-EM structures of Mycobacterium tuberculosis pyruvate carboxylase reveal acetyl-CoA-mediated tetramer stabilization and carrier-domain coordination
    Article Snippet: Cell pellets were resuspended in lysis buffer (50mMHEPES, pH 7.5, 300mMNaCl, 1mMMgCl2, 5 mM imidazole, 5% (v/v) glycerol, and 3mM β-mercaptoethanol) supplemented with EDTAfree protease inhibitor cocktail (Roche) and 0.5mgmL−1 lysozyme and lysed by sonication. .. The lysate was clarified by centrifugation at 20,000 g for 30min, and the supernatant was loaded onto TALON metal affinity resin (Takara), washed extensively with lysis buffer containing 5mM imidazole, and eluted with lysis buffer supplemented with 200mM imidazole. ..

    Incubation:

    Article Title: The circadian rhythm gene BHLHE40 regulates inflammation in asthma patients and promotes ferroptosis through PTGS2 and SERPINB2 in lung fibroblast cells
    Article Snippet: Cell extraction was mixed with RNA immunoprecipitation (RIP) buffer (Merck Millipore, Burlington, MA, USA) containing antibody-coupled sepharose beads coated with anti-BHLHE40, anti-PTGS2 or anti-IgG antibody. .. After overnight incubation at 4 °C, beads were washed with lysis buffer and the RNA was extracted using Trizol reagent (TaKaRa, Tokyo, Japan). ..

    Single Cell:

    Article Title: A pharynx-to-brain sensory pathway mediates swallowing-like behavior evoked by mechanical stimulation
    Article Snippet: .. Vagal ganglion neuron single-cell library preparation The vagal ganglion neuronswere placed in4μL lysis buffer (containing oligo-dT primer, Recombinant RNase inhibitor (TaKaRa, Cat # 2313 A), and 1% Triton X-100, dNTP mix). ..

    Recombinant:

    Article Title: A pharynx-to-brain sensory pathway mediates swallowing-like behavior evoked by mechanical stimulation
    Article Snippet: .. Vagal ganglion neuron single-cell library preparation The vagal ganglion neuronswere placed in4μL lysis buffer (containing oligo-dT primer, Recombinant RNase inhibitor (TaKaRa, Cat # 2313 A), and 1% Triton X-100, dNTP mix). ..

    Polymerase Chain Reaction:

    Article Title: Constructing nucleoside deaminase-assisted orthogonal DNA replication system for continuous evolution in prokaryotes.
    Article Snippet: Orthogonal DNA replication system-based continuous evolution enables user-defined genes to undergo a hypermutagenic evolutionary state through a replication process independent of the host genome, while maintaining overall cellular stability.. However, its application is constrained by the relatively low mutation rate of orthogonal error-prone DNA polymerases (ep-DNAP) and by strong mutation bias during misincorporation.. To address this, we developed nucleoside deaminase–assisted orthogonal DNA replication (NDAORep) systems, in which nucleoside deaminases (NDA) are coupled to orthogonal DNA replication to enhance and tune mutagenesis.

    Real-time Polymerase Chain Reaction:

    Article Title: Constructing nucleoside deaminase-assisted orthogonal DNA replication system for continuous evolution in prokaryotes.
    Article Snippet: Orthogonal DNA replication system-based continuous evolution enables user-defined genes to undergo a hypermutagenic evolutionary state through a replication process independent of the host genome, while maintaining overall cellular stability.. However, its application is constrained by the relatively low mutation rate of orthogonal error-prone DNA polymerases (ep-DNAP) and by strong mutation bias during misincorporation.. To address this, we developed nucleoside deaminase–assisted orthogonal DNA replication (NDAORep) systems, in which nucleoside deaminases (NDA) are coupled to orthogonal DNA replication to enhance and tune mutagenesis.

    Synthesized:

    Article Title: Acacetin alleviates pyroptosis, inflammatory response, and oxidative stress in renal tubular epithelial cells caused by kidney stone via targeting GPR35.
    Article Snippet: Nephrolithiasis, particularly calcium oxalate (CaOx) stones, remains a global health burden with limited pharmacological options for recurrence prevention.. In this study, we investigated the therapeutic mechanism of acacetin (ACA) using both in vitro (COM-stimulated HK-2 cells) and in vivo (glyoxylate-induced mice) models of CaOx kidney stone.. Our results demonstrated that ACA treatment dose-dependently attenuated renal injury, reduced the expression of pro-inflammatory cytokines (IL-1β, IL-6, and TNF-α), and activated the Nrf2/HO-1/ NQO1 antioxidant pathway.

    cDNA Synthesis:

    Article Title: Acacetin alleviates pyroptosis, inflammatory response, and oxidative stress in renal tubular epithelial cells caused by kidney stone via targeting GPR35.
    Article Snippet: Nephrolithiasis, particularly calcium oxalate (CaOx) stones, remains a global health burden with limited pharmacological options for recurrence prevention.. In this study, we investigated the therapeutic mechanism of acacetin (ACA) using both in vitro (COM-stimulated HK-2 cells) and in vivo (glyoxylate-induced mice) models of CaOx kidney stone.. Our results demonstrated that ACA treatment dose-dependently attenuated renal injury, reduced the expression of pro-inflammatory cytokines (IL-1β, IL-6, and TNF-α), and activated the Nrf2/HO-1/ NQO1 antioxidant pathway.



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