illumina-based de novo transcriptome sequencing and analysis (Illumina Inc)

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Illumina Inc illumina-based de novo transcriptome sequencing and analysis
Illumina Based De Novo Transcriptome Sequencing And Analysis, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing-based+transcriptomic+analysis/illumina+transcriptome+assembly/pm29075165-248-3-2
Average 90 stars, based on 1 article reviews

illumina-based de novo transcriptome sequencing and analysis - by Bioz Stars, 2026-10

90/100 stars

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Agarose Gel Electrophoresis:

Article Title: De novo sequencing, assembly, and characterization of Asparagus racemosus transcriptome and analysis of expression profile of genes involved in the flavonoid biosynthesis pathway
Article Snippet: .. The quality of total RNA was checked on agarose gel-electrophoresis and utilized for de novo transcriptome Illumina sequencing analysis ( ). .. Illumina Hi-Seq Platform sequencing results of cDNAs prepared from total RNA resulted in 23,101,000 high-quality reads (2 × 150 bp; 6,667,619,278 nucleotides) with paired-end raw reads (∼6.6 GB) from the pooled assembled transcript of roots and leaf samples of A. racemosus ( ).

Sequencing:

Article Title: Identification of differentially expressed miRNAs and their target genes in response to brassinolide treatment on flowering of tree peony ( Paeonia ostii )
Article Snippet: .. Based on Illumina-based de novo transcriptome sequencing, 291 unigene sequences associated with early and late flowering were identified in tree peony by bulked segregant RNA-seq (BSR-seq). ..

RNA Sequencing:

other:

Article Title: Transcriptome analysis of mulberry ( Morus alba L.) leaves to identify differentially expressed genes associated with post-harvest shelf-life elongation
Article Snippet: Illumina-based transcriptome assembly, although based on short read sequencing technology, generates a wide range of transcriptome coverage helpful in identifying genes involved in different processes .

Article Title: The biosynthetic pathway of the hallucinogen mescaline and its heterologous reconstruction.
Article Snippet: Mescaline, among the earliest identified natural hallucinogens, holds great potential in psychotherapy treatment.. Nonetheless, despite the existence of a postulated biosynthetic pathway for more than half a century, the specific enzymes involved in this process are yet to be identified.. In this study, we investigated the cactus Lophophora williamsii (Peyote), the largest known natural producer of the phenethylamine mescaline.

Article Title: Transcriptome analysis of mulberry (Morus alba L.) leaves to identify differentially expressed genes associated with post-harvest shelf-life elongation.
Article Snippet: Illumina-based transcriptome assembly, although based on short read sequencing technology, generates a wide range of transcriptome coverage helpful in identifying genes involved in different processes26.

RNA sequencing:

Article Title: Differential Transcriptome Analysis Reveals Genes Related to Low- and High-Temperature Stress in the Fall Armyworm, Spodoptera frugiperda .
Article Snippet: De novo Assembly Illumina short reads were quality-filtered and adapter-trimmed using Trimmomatic v0.38.1 FastQC v0.11.72 was used to check data quality before and after trimming. .. After the removal of low-quality reads, an Illumina-based de novo transcriptome assembly was performed using Trinity version trinity rnaseq r20140717, bowtie 1.1.2 (Langmead et al., 2009). ..

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