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SoftGenetics sequence analysis program nextgene program
Sequence Analysis Program Nextgene Program, supplied by SoftGenetics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+analysis+program+agent/sequence+analysis+program+nextgene+program/pmc03060848-175-1-6
Average 90 stars, based on 1 article reviews
sequence analysis program nextgene program - by Bioz Stars, 2026-09
90/100 stars

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Article Title: Small RNA profiling of Dengue virus-mosquito interactions implicates the PIWI RNA pathway in anti-viral defense
Article Snippet: .. The sequence analysis program NEXTGENe program (SoftGenetics, LLC) version 1.94 or 2.0 was used to align sRNAs in csfasta format to reference genomes in the following order: Ae. aegypti transcriptome (AaegL1.2.fa.gz), masked Supercontigs (Liverpool.AaegL1.fa.gz), unmasked contigs (Liverpool.AaegL1.fa.gz), and dengue genome. ..



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Celera sequencing analysis program agent
Schematic overview of the TOMM40-APOE locus. ( a ) Genomic locations of the TOMM40 and APOE genes on chromosome 19 between 50 084 480 and 50 107 480 bp. The regions subjected to primary <t>sequencing</t> and phylogenetic analysis for the exploratory (R1) (23 kb) and confirmatory (R2) (10 kb) studies are highlighted on the genomic map (NCBI Build 36.3). ( b ) Distribution of SNP and insertion/deletion polymorphisms are shown on the gene structure of TOMM40 covered in the region that was subjected to primary sequencing. The region covers exons 6–10 and all associated intronic regions. The variable poly-T repeat (rs10524523) that is significantly associated with LOAD age of onset is depicted with the square labeled ‘P'.
Sequencing Analysis Program Agent, supplied by Celera, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/sequencing+analysis+program+agent/sequencing+analysis+program+agent/pmc02946560-64-1-9
Average 90 stars, based on 1 article reviews
sequencing analysis program agent - by Bioz Stars, 2026-09
90/100 stars
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Schematic overview of the TOMM40-APOE locus. ( a ) Genomic locations of the TOMM40 and APOE genes on chromosome 19 between 50 084 480 and 50 107 480 bp. The regions subjected to primary sequencing and phylogenetic analysis for the exploratory (R1) (23 kb) and confirmatory (R2) (10 kb) studies are highlighted on the genomic map (NCBI Build 36.3). ( b ) Distribution of SNP and insertion/deletion polymorphisms are shown on the gene structure of TOMM40 covered in the region that was subjected to primary sequencing. The region covers exons 6–10 and all associated intronic regions. The variable poly-T repeat (rs10524523) that is significantly associated with LOAD age of onset is depicted with the square labeled ‘P'.

Journal: The Pharmacogenomics Journal

Article Title: A TOMM40 variable-length polymorphism predicts the age of late-onset Alzheimer's disease

doi: 10.1038/tpj.2009.69

Figure Lengend Snippet: Schematic overview of the TOMM40-APOE locus. ( a ) Genomic locations of the TOMM40 and APOE genes on chromosome 19 between 50 084 480 and 50 107 480 bp. The regions subjected to primary sequencing and phylogenetic analysis for the exploratory (R1) (23 kb) and confirmatory (R2) (10 kb) studies are highlighted on the genomic map (NCBI Build 36.3). ( b ) Distribution of SNP and insertion/deletion polymorphisms are shown on the gene structure of TOMM40 covered in the region that was subjected to primary sequencing. The region covers exons 6–10 and all associated intronic regions. The variable poly-T repeat (rs10524523) that is significantly associated with LOAD age of onset is depicted with the square labeled ‘P'.

Article Snippet: A proprietary sequencing analysis program called ‘Agent' (developed by Celera, Alameda, CA, USA) was used to align sequencing reads to the appropriate reference sequence, and produce ‘contigs' associated with each clone.

Techniques: Sequencing, Labeling