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multiple sequence alignment program sequencher 3.1  (Gene Codes Inc)

 
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    Structured Review

    Gene Codes Inc multiple sequence alignment program sequencher 3.1
    Multiple Sequence Alignment Program Sequencher 3.1, supplied by Gene Codes Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/sequence+alignment+programs+sequencher/dna+sequence+assemble+software+sequencher/pm16949311-70-18-23
    Average 90 stars, based on 1 article reviews
    multiple sequence alignment program sequencher 3.1 - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Polymerase Chain Reaction:

    Article Title: Isolated nucleic acids and kits for identifying subjects susceptible to ataxic neurological disease
    Article Snippet: Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences were aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. .. Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences were aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. ..

    Article Title: Methods for identifying subjects susceptible to charcot-marie-tooth neuropathy type 1C
    Article Snippet: .. Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences are aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. ..

    Amplification:

    Article Title: Isolated nucleic acids and kits for identifying subjects susceptible to ataxic neurological disease
    Article Snippet: Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences were aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. .. Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences were aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. ..

    Article Title: Enzyme associated with equol synthesis
    Article Snippet: The amplified DNA fragments were excised from the agarose gel, and purified using a Gel-Extraction kit (Qiagen). .. The base sequences of the purified DNA fragments were determined by the direct sequence using the primers used for the amplification, with the result that the sequence of dihydrodaidzein synthesis enzyme gene was observed in those DNA fragments of about 1.2 kb (SacI) and about 1.0 kb (Sau3AI) in 5′-RACE, and that of about 0.6 kb (SacI) in 3′-RACE. (3) Determination of Entire Base Sequence of Dihydrodaidzein Synthesis Enzyme Gene The DNA base sequence obtained by the degenerative-PCR in Example A5 and the rapid amplification of the cDNA terminus sequence in (2) of the present Example was subjected to assemble assay using DNA sequence assemble software SEQUENCHER (Gene Codes Inc, USA). ..

    Article Title: Methods for identifying subjects susceptible to charcot-marie-tooth neuropathy type 1C
    Article Snippet: .. Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences are aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. ..

    Sequencing:

    Article Title: Isolated nucleic acids and kits for identifying subjects susceptible to ataxic neurological disease
    Article Snippet: Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences were aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. .. Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences were aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. ..

    Article Title: Direct Selection of Functional Insulators in Arabidopsis thaliana
    Article Snippet: .. Bioinformatics DNAMAN (http://www.lynnon.com/) and Sequencher DNA Sequence Analysis (https://www.genecodes.com/) were employed for the analysis of DNA sequencing results and chromatographs. ..

    Article Title: Methods for identifying subjects susceptible to charcot-marie-tooth neuropathy type 1C
    Article Snippet: .. For example, resulting sequences can be aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes as described in Example 5. ..

    Article Title: Enzyme associated with equol synthesis
    Article Snippet: The amplified DNA fragments were excised from the agarose gel, and purified using a Gel-Extraction kit (Qiagen). .. The base sequences of the purified DNA fragments were determined by the direct sequence using the primers used for the amplification, with the result that the sequence of dihydrodaidzein synthesis enzyme gene was observed in those DNA fragments of about 1.2 kb (SacI) and about 1.0 kb (Sau3AI) in 5′-RACE, and that of about 0.6 kb (SacI) in 3′-RACE. (3) Determination of Entire Base Sequence of Dihydrodaidzein Synthesis Enzyme Gene The DNA base sequence obtained by the degenerative-PCR in Example A5 and the rapid amplification of the cDNA terminus sequence in (2) of the present Example was subjected to assemble assay using DNA sequence assemble software SEQUENCHER (Gene Codes Inc, USA). ..

    Article Title: Enzyme associated with equol synthesis
    Article Snippet: The purified DNA fragment was inserted to a pT7-Blue Cloning Vector (Novagen) to determine the base sequence. .. The obtained DNA base sequence was assayed using DNA sequence assemble software SEQUENCHER (Gene Codes Inc, USA), with the result that the DNA fragment contained the base sequences corresponding to the amino acid sequences of Peptides 1 and 3 found in Example A4. .. To determine the sequences of 5′ end and 3′ end of the 1.9 kb dihydrodaidzein synthesis enzyme gene obtained in Example A5 so as to determine the entire base sequences, rapid amplification of cDNA terminus sequence (5′-, 3′-RACE) was performed using the genome DNA library of the Lactococcus 20-92 strain as a template. (1) Production of Genome DNA Library The genome DNA of the Lactococcus 20-92 strain purified in Example A5 was fragmented through 16 hours digestion at 37° C., using restriction endonuclease (BamHI, EcoRI, HindIII, KpnI, PstI, SacI, SalI, Sau3AI, XhoI: products of Takara Bio Inc.).

    Article Title: Methods for identifying subjects susceptible to charcot-marie-tooth neuropathy type 1C
    Article Snippet: .. Methods Utilized: PCR Amplification: Carried out as described in Example 1 Direct Sequencing: Carried out as described in Example 1 Data Analysis: The resulting sequences are aligned with the known exon sequence using a multiple sequence alignment tool, Sequencher (Gene Codes Corporation, Ann Arbor, Mich.), in order to identify any nucleotide changes. ..

    Article Title: Methods and related compositions for manufacturing food and feed
    Article Snippet: .. Sequence software (Gene Codes Corporation) is used for sequence assembly and editing. ..

    DNA Sequencing:

    Article Title: Direct Selection of Functional Insulators in Arabidopsis thaliana
    Article Snippet: .. Bioinformatics DNAMAN (http://www.lynnon.com/) and Sequencher DNA Sequence Analysis (https://www.genecodes.com/) were employed for the analysis of DNA sequencing results and chromatographs. ..

    other:

    Article Title: Adaptation to cell culture induces functional differences in measles virus proteins
    Article Snippet: Sequence data were analyzed with the SequencherTM DNA sequencing program (Gene Codes Corporation) and confirmed by comparison to the published sequence for each strain.

    Purification:

    Article Title: Enzyme associated with equol synthesis
    Article Snippet: The amplified DNA fragments were excised from the agarose gel, and purified using a Gel-Extraction kit (Qiagen). .. The base sequences of the purified DNA fragments were determined by the direct sequence using the primers used for the amplification, with the result that the sequence of dihydrodaidzein synthesis enzyme gene was observed in those DNA fragments of about 1.2 kb (SacI) and about 1.0 kb (Sau3AI) in 5′-RACE, and that of about 0.6 kb (SacI) in 3′-RACE. (3) Determination of Entire Base Sequence of Dihydrodaidzein Synthesis Enzyme Gene The DNA base sequence obtained by the degenerative-PCR in Example A5 and the rapid amplification of the cDNA terminus sequence in (2) of the present Example was subjected to assemble assay using DNA sequence assemble software SEQUENCHER (Gene Codes Inc, USA). ..

    Software:

    Article Title: Enzyme associated with equol synthesis
    Article Snippet: The amplified DNA fragments were excised from the agarose gel, and purified using a Gel-Extraction kit (Qiagen). .. The base sequences of the purified DNA fragments were determined by the direct sequence using the primers used for the amplification, with the result that the sequence of dihydrodaidzein synthesis enzyme gene was observed in those DNA fragments of about 1.2 kb (SacI) and about 1.0 kb (Sau3AI) in 5′-RACE, and that of about 0.6 kb (SacI) in 3′-RACE. (3) Determination of Entire Base Sequence of Dihydrodaidzein Synthesis Enzyme Gene The DNA base sequence obtained by the degenerative-PCR in Example A5 and the rapid amplification of the cDNA terminus sequence in (2) of the present Example was subjected to assemble assay using DNA sequence assemble software SEQUENCHER (Gene Codes Inc, USA). ..

    Article Title: Enzyme associated with equol synthesis
    Article Snippet: The purified DNA fragment was inserted to a pT7-Blue Cloning Vector (Novagen) to determine the base sequence. .. The obtained DNA base sequence was assayed using DNA sequence assemble software SEQUENCHER (Gene Codes Inc, USA), with the result that the DNA fragment contained the base sequences corresponding to the amino acid sequences of Peptides 1 and 3 found in Example A4. .. To determine the sequences of 5′ end and 3′ end of the 1.9 kb dihydrodaidzein synthesis enzyme gene obtained in Example A5 so as to determine the entire base sequences, rapid amplification of cDNA terminus sequence (5′-, 3′-RACE) was performed using the genome DNA library of the Lactococcus 20-92 strain as a template. (1) Production of Genome DNA Library The genome DNA of the Lactococcus 20-92 strain purified in Example A5 was fragmented through 16 hours digestion at 37° C., using restriction endonuclease (BamHI, EcoRI, HindIII, KpnI, PstI, SacI, SalI, Sau3AI, XhoI: products of Takara Bio Inc.).

    Article Title: Methods and related compositions for manufacturing food and feed
    Article Snippet: .. Sequence software (Gene Codes Corporation) is used for sequence assembly and editing. ..



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