reverse phase protein microarrays (Aushon Biosystems)
Structured Review
Reverse Phase Protein Microarrays, supplied by Aushon Biosystems, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/reverse+phase+protein+microarray/protein+arrays+aushon/pmc03501264-374-0-11
Average 90 stars, based on 1 article reviews
Images
Related Articles
Enzyme-linked Immunosorbent Assay:Article Title: Kruppel-like factor 10 (KLF10) as a biomarker of endothelial progenitor cell dysfunction Article Snippet: .. ELISA The supernatants from cultured CMPs, GMPs, MEPs and HSCs were collected and subjected to for ELISA using the Cell Culture:Article Title: Kruppel-like factor 10 (KLF10) as a biomarker of endothelial progenitor cell dysfunction Article Snippet: .. ELISA The supernatants from cultured CMPs, GMPs, MEPs and HSCs were collected and subjected to for ELISA using the Multiplex Assay:Article Title: Kruppel-like factor 10 (KLF10) as a biomarker of endothelial progenitor cell dysfunction Article Snippet: .. ELISA The supernatants from cultured CMPs, GMPs, MEPs and HSCs were collected and subjected to for ELISA using the Article Title: A pilot study to assess the feasibility of a remotely monitored high-intensity interval training program prior to allogeneic hematopoietic stem cell transplantation Article Snippet: .. In order to develop the optimal arrays, we have the opportunity to leverage 3 other:Article Title: Genetic ablation of epidermal EGFR reveals the dynamic origin of adverse effects of anti-EGFR therapy Article Snippet: Multiplex biomarker analysis Concentrations of cytokines and chemokines in plasma of patients or mice or cell supernatants were measured using Article Title: Genetic ablation of epidermal EGFR reveals the dynamic origin of adverse effects of anti-EGFR therapy Article Snippet: Concentrations of cytokines and chemokines in plasma of patients or mice or cell supernatants were measured using Article Title: Methods and non-immunogenic compositions for treating inflammatory disorders Article Snippet: Cytokine content is assayed on a Protein Array:Article Title: Human Bone Marrow Stromal Cell Confluence: Effects on Cell Characteristics and Methods of Assessment Article Snippet: .. The concentrations of cytokine and growth factors in BMSC supernatants were measured with Article Title: A pilot study to assess the feasibility of a remotely monitored high-intensity interval training program prior to allogeneic hematopoietic stem cell transplantation Article Snippet: .. In order to develop the optimal arrays, we have the opportunity to leverage 3 Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: CpG DNA methylation , Illuminia Infinium HM 450 , 173 , open. .. Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: .. The integrated clinical and genomic datasets are available through the NCI’s Genomic Data Commons. table ft1 table-wrap mode="anchored" t5 caption a7 Data Type Platforms Cases (n) Data Access TCGA Core Sample Set (n = 173 total cases) Whole-exome DNA sequencing Illumina; SureSelect v2 173 controlled: BAM files open: somatic mutations DNA copy number Affymetrix SNP 6.0 173 controlled: CEL files open: copy number mRNA sequencing Illumina 173 controlled: BAM files open: expression miRNA sequencing Illumina 173 controlled: BAM files open: expression CpG DNA methylation Illuminia Infinium HM 450 173 Diagnostic Assay:Article Title: A pilot study to assess the feasibility of a remotely monitored high-intensity interval training program prior to allogeneic hematopoietic stem cell transplantation Article Snippet: .. In order to develop the optimal arrays, we have the opportunity to leverage 3 DNA Sequencing:Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: .. The integrated clinical and genomic datasets are available through the NCI’s Genomic Data Commons. table ft1 table-wrap mode="anchored" t5 caption a7 Data Type Platforms Cases (n) Data Access TCGA Core Sample Set (n = 173 total cases) Whole-exome DNA sequencing Illumina; SureSelect v2 173 controlled: BAM files open: somatic mutations DNA copy number Affymetrix SNP 6.0 173 controlled: CEL files open: copy number mRNA sequencing Illumina 173 controlled: BAM files open: expression miRNA sequencing Illumina 173 controlled: BAM files open: expression CpG DNA methylation Illuminia Infinium HM 450 173 Sequencing:Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: .. The integrated clinical and genomic datasets are available through the NCI’s Genomic Data Commons. table ft1 table-wrap mode="anchored" t5 caption a7 Data Type Platforms Cases (n) Data Access TCGA Core Sample Set (n = 173 total cases) Whole-exome DNA sequencing Illumina; SureSelect v2 173 controlled: BAM files open: somatic mutations DNA copy number Affymetrix SNP 6.0 173 controlled: CEL files open: copy number mRNA sequencing Illumina 173 controlled: BAM files open: expression miRNA sequencing Illumina 173 controlled: BAM files open: expression CpG DNA methylation Illuminia Infinium HM 450 173 Expressing:Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: .. The integrated clinical and genomic datasets are available through the NCI’s Genomic Data Commons. table ft1 table-wrap mode="anchored" t5 caption a7 Data Type Platforms Cases (n) Data Access TCGA Core Sample Set (n = 173 total cases) Whole-exome DNA sequencing Illumina; SureSelect v2 173 controlled: BAM files open: somatic mutations DNA copy number Affymetrix SNP 6.0 173 controlled: CEL files open: copy number mRNA sequencing Illumina 173 controlled: BAM files open: expression miRNA sequencing Illumina 173 controlled: BAM files open: expression CpG DNA methylation Illuminia Infinium HM 450 173 DNA Methylation Assay:Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: .. The integrated clinical and genomic datasets are available through the NCI’s Genomic Data Commons. table ft1 table-wrap mode="anchored" t5 caption a7 Data Type Platforms Cases (n) Data Access TCGA Core Sample Set (n = 173 total cases) Whole-exome DNA sequencing Illumina; SureSelect v2 173 controlled: BAM files open: somatic mutations DNA copy number Affymetrix SNP 6.0 173 controlled: CEL files open: copy number mRNA sequencing Illumina 173 controlled: BAM files open: expression miRNA sequencing Illumina 173 controlled: BAM files open: expression CpG DNA methylation Illuminia Infinium HM 450 173 Periodic Counter-current Chromatography:Article Title: Comprehensive molecular characterization of pheochromocytoma and paraganglioma Article Snippet: .. The integrated clinical and genomic datasets are available through the NCI’s Genomic Data Commons. table ft1 table-wrap mode="anchored" t5 caption a7 Data Type Platforms Cases (n) Data Access TCGA Core Sample Set (n = 173 total cases) Whole-exome DNA sequencing Illumina; SureSelect v2 173 controlled: BAM files open: somatic mutations DNA copy number Affymetrix SNP 6.0 173 controlled: CEL files open: copy number mRNA sequencing Illumina 173 controlled: BAM files open: expression miRNA sequencing Illumina 173 controlled: BAM files open: expression CpG DNA methylation Illuminia Infinium HM 450 173 |

![A discrete role for the alpha catalytic PI3K isoform in proneural (PN) GSCs. ( A ) Expression z-score data from TCGA (Extended Verhaak) for PIK3CA (left panel), PIK3CB (middle panel) and PIK3CD (right panel) were downloaded from the GBM-BioDP ( http://gbm-biodp.nci.nih.gov/ ) for CL (n = 105), MES (n = 124) and PN (n = 113) subtype GBM from the HT Human Genome U133 (HT_HG-U133A) array and analysed using GraphPad Prism 8. As recent evidence suggests the neural subtype represents excessive contamination with normal brain, it has been excluded from the analysis. Unpaired one-way ANOVA, * p ≤ 0.05; ** p ≤ 0.01; **** p ≤ 0.0001. ( B ) Survival analysis based on the impact of the multi-gene prognostic index for coexpression of PIK3CA and NES (upper panels), PIK3CB and NES (middle panels) or PIK3CD and NES (lower panels) for CL (n = 53, left panels), MES (n = 57, middle panels) and PN (n = 56, right panels) subtype. TCGA gene expression data (Verhaak Core) for PIK3CA and NES , PIK3CB and NES or PIK3CD and NES from the HT_HG-U133A array were used for multigene prognostic index. Figure was generated using the GBM-BioDP software. ( C ) GSC lines JK16, 83Mes, 157PN and AC17PN were analysed by Western blot using antibodies against NF1, p110α and GAPDH. Membrane was stripped and reprobed with an antibody against p110β. Lysates from the same experiment were run in parallel and probed for p110 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\updelta $$\end{document} δ and GAPDH. ( D ) Reverse-phase protein <t>microarray</t> <t>(RPPA)</t> data from TCGA GBM samples. Boxplots of RPPA analytes for phospho-AKT(Ser 473 ) measured in CL (n = 28), MES (n = 29) and PN (n = 41) samples from the cohort of GBM tumours (Extended Verhaak) that was subjected to RPPA analysis within the TCGA consortium. RPPA data were downloaded from the GBM-BioDP and analysed using GraphPad Prism 8. Unpaired one-way ANOVA: * p ≤ 0.05. ( E ) Survival analysis based on RPPA analysis for phospho-AKT(Ser 473 ) using the Extended Verhaak cohort submitted to the TCGA consortium for CL (n = 28, left panel), MES (n = 29, middle panel) and PN (n = 41, right panel) subtypes. Figure was generated using the GBM-BioDP software. ( F ) GSC lines JK16, 83Mes, 157PN and AC17PN were analysed by Western blot using antibodies against AKT. Membrane was stripped and re-probed for p-AKT(Thr 308 ), then stripped and reprobed for p-AKT(Ser 473 ), then stripped and re-probed for HSP90.](https://pub-med-central-images-cdn.bioz.com/pub_med_central_ids_ending_with_6588/pmc07736588/pmc07736588__41598_2020_78788_Fig4_HTML.jpg)