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Simplot Science simplot v3 5 1 software
Simplot V3 5 1 Software, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/recombination+analysis+software+simplot/1+5+simplot+software+v3/pmc12940934-142-8-8
Average 86 stars, based on 1 article reviews
simplot v3 5 1 software - by Bioz Stars, 2026-09
86/100 stars

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Related Articles

Software:

Article Title: Detection, genetic characterization and reassortment analysis of Tribeč virus
Article Snippet: .. Recombination events supported by the exploratory methods were further analysed and visualized by the SimPlot v3.5.1 software [ ]. ..

Article Title: Molecular Characterization of Emerging Gyrovirus galga 1 from Poultry Markets of Guangxi, China.
Article Snippet: .. The predicted recombinants were subsequently evaluated separately using SimPlot v3.5.1 software (Figure 6). ..

Article Title: Genetic variability and intra-genotype recombination of DuCV from ducks and geese in central and north China
Article Snippet: .. Putative recombination events identified by RDP (v4.83) were further analyzed using SimPlot v3.5.1 software to validate recombination breakpoints and characterize recombination patterns using bootscan analysis ( ). ..

Article Title: Detection, genetic characterization and reassortment analysis of Tribeč virus.
Article Snippet: .. Recombination events supported by the exploratory methods were further analysed and visualized by the SimPlot v3.5.1 software [53]. ..

Article Title: Near-full-length genomic characterization and phylogenetic analysis of an HIV-1 CRF02_AG/G second-generation recombinant in Ningxia, China
Article Snippet: .. Fig. 3 JPHMM Recombinant pattern analysis of the new recombinant strain of sample A01. a CRF02_AG NFLG Reference jpHMM Recombination Pattern Analysis. b NFLG jpHMM Recombination Combination Pattern Analysis for Sample A01. c NFLG Mosaic Structure and Gene Recombination Breakpoint Analysis for Sample A01 To further determine the location of the recombination breakpoint, this study utilized the Bootscan analysis function in Simplot v3.5.1 software to analyze the nucleotide genetic similarity between the near-full-length genome (NFLG) of A01 and the CRF02_AG standard strain, as well as the G subtype reference strain. ..

Article Title: Near-full-length genomic characterization and phylogenetic analysis of an HIV-1 CRF02_AG/G second-generation recombinant in Ningxia, China.
Article Snippet: .. To further determine the location of the recombination breakpoint, this study utilized the Bootscan analysis function in Simplot v3.5.1 software to analyze the nucleotide genetic similarity between the near-full-length genome (NFLG) of A01 and the CRF02_AG standard strain, as well as the G subtype reference strain. ..

other:

Article Title: Epidemiological characteristics and viral molecular evolution analysis of severe fever with thrombocytopenia syndrome in Shandong Province, China.
Article Snippet: Second, the candidate recombination events were further verified by utilizing SimPlot software (v3.5.1).

Recombinant:

Article Title: Near-full-length genomic characterization and phylogenetic analysis of an HIV-1 CRF02_AG/G second-generation recombinant in Ningxia, China
Article Snippet: .. Fig. 3 JPHMM Recombinant pattern analysis of the new recombinant strain of sample A01. a CRF02_AG NFLG Reference jpHMM Recombination Pattern Analysis. b NFLG jpHMM Recombination Combination Pattern Analysis for Sample A01. c NFLG Mosaic Structure and Gene Recombination Breakpoint Analysis for Sample A01 To further determine the location of the recombination breakpoint, this study utilized the Bootscan analysis function in Simplot v3.5.1 software to analyze the nucleotide genetic similarity between the near-full-length genome (NFLG) of A01 and the CRF02_AG standard strain, as well as the G subtype reference strain. ..



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