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Plotly Technologies Inc r package plotly version 4.10.3
R Package Plotly Version 4.10.3, supplied by Plotly Technologies Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/r-package+plotly/r+package+plotly+version+4+10+3/pm39996757-76-0-2
Average 90 stars, based on 1 article reviews
r package plotly version 4.10.3 - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing
Article Snippet: R package Plotly version 4.10.3 [ https://plot.ly , accessed on 10 August 2024] and ggplot2 version 3.5.1 [ https://ggplot2.tidyverse.org , accessed on 12 August 2024] were used for graphical display and interpretation [ , , ].

Article Title: Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing.
Article Snippet: R package Plotly version 4.10.3 [https://plot.ly, accessed on 10 August 2024] and g plot2 version 3.5.1 [ht ps: Cells 2025, 14, 285 5 of 19 //ggplot2.tidyverse.org, accessed on 12 August 2024] were used for graphical display and interpretation [28–30].

Article Title: Environmental DNA metabarcoding reflects spatiotemporal fish community shifts in the Scheldt estuary.
Article Snippet: This ordination technique, implemented using the plotly v4.10.3 package (Sievert, 2020), aids in visualizing potential spatial correlation.

Article Title: Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing.
Article Snippet: R package Plotly version 4.10.3 [https://plot.ly, accessed on 10 August 2024] and ggplot2 version 3.5.1

Article Title: Multidimensional mass profiles increase confidence in bacterial identification when using low-resolution mass spectrometers.
Article Snippet: Data visualization and analysis were performed in R.33 Ordination data was visualized using the plotly version 4.10.1 package in R.34,35 MANOVA-type analyses PERMANOVA and ANOSIM were performed using the vegan package version 2.6.4 in R.36 Non-metric multidimensional scaling (NMDS) was run using the vegan package in R. EnvFit ordination-based models were generated using the vegan package in R. NMDS ordinations for MS1 and MS/MS comparisons as well as composite datasets were performed using the Procrustes and Protest functions in the vegan package in R. Optimal feature binning associated with metadata was performed using the opticut package version 0.1.2 in R.37 Opticut has a 3-tier ranking for the strength of association; only the strongest tier of association (“+++”) was considered in this analysis.

Article Title: Distribution and Evolutionary Trajectories of β-Lactamases in Vibrio : Genomic Insights from Carbenicillin-Hydrolyzing Class A β-Lactamases (CARB) in the Harveyi and Cholerae Clades
Article Snippet: Sunburst charts were generated using the “plotly” v4.10.4 and “dplyr” v1.1.4 packages, via the “plot_ly” function to visualize hierarchical data with customized colors and a maximum depth of four levels.

Article Title: Metabolic phenotyping and global functional analysis facilitate metabolic signature discovery for tuberculosis treatment monitoring.
Article Snippet: Tracking alterations in polar metabolite and lipid levels during anti-tuberculosis (TB) interventions is an emerging biomarker discovery and validation approach due to its sensitivity in capturing changes and reflecting on the host status.. Here, we employed deep plasma metabolic phenotyping to explore the TB patient metabolome during three phases of treatment: at baseline, during intensive phase treatment, and upon treatment completion.. Differential metabolites (DMs) in each period were determined, and the pathway-level biological alterations were explored by untargeted metabolomics-guided functional interpretations that bypassed identification.

Article Title: Crosstalk between chromatin and Shavenbaby defines transcriptional output along the Drosophila intestinal stem cell lineage
Article Snippet: Plotly v4.9.3 , Sievert. , https://plotly.com/r/.

Tandem Mass Spectroscopy:

Article Title: Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing
Article Snippet: R package Plotly version 4.10.3 [ https://plot.ly , accessed on 10 August 2024] and ggplot2 version 3.5.1 [ https://ggplot2.tidyverse.org , accessed on 12 August 2024] were used for graphical display and interpretation [ , , ].

Article Title: Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing.
Article Snippet: R package Plotly version 4.10.3 [https://plot.ly, accessed on 10 August 2024] and g plot2 version 3.5.1 [ht ps: Cells 2025, 14, 285 5 of 19 //ggplot2.tidyverse.org, accessed on 12 August 2024] were used for graphical display and interpretation [28–30].

Article Title: Environmental DNA metabarcoding reflects spatiotemporal fish community shifts in the Scheldt estuary.
Article Snippet: This ordination technique, implemented using the plotly v4.10.3 package (Sievert, 2020), aids in visualizing potential spatial correlation.

Article Title: Youth Who Control HIV on Antiretroviral Therapy Display Unique Plasma Biomarkers and Cellular Transcriptome Profiles Including DNA Repair and RNA Processing.
Article Snippet: R package Plotly version 4.10.3 [https://plot.ly, accessed on 10 August 2024] and ggplot2 version 3.5.1

Article Title: Multidimensional mass profiles increase confidence in bacterial identification when using low-resolution mass spectrometers.
Article Snippet: Data visualization and analysis were performed in R.33 Ordination data was visualized using the plotly version 4.10.1 package in R.34,35 MANOVA-type analyses PERMANOVA and ANOSIM were performed using the vegan package version 2.6.4 in R.36 Non-metric multidimensional scaling (NMDS) was run using the vegan package in R. EnvFit ordination-based models were generated using the vegan package in R. NMDS ordinations for MS1 and MS/MS comparisons as well as composite datasets were performed using the Procrustes and Protest functions in the vegan package in R. Optimal feature binning associated with metadata was performed using the opticut package version 0.1.2 in R.37 Opticut has a 3-tier ranking for the strength of association; only the strongest tier of association (“+++”) was considered in this analysis.

Article Title: Distribution and Evolutionary Trajectories of β-Lactamases in Vibrio : Genomic Insights from Carbenicillin-Hydrolyzing Class A β-Lactamases (CARB) in the Harveyi and Cholerae Clades
Article Snippet: Sunburst charts were generated using the “plotly” v4.10.4 and “dplyr” v1.1.4 packages, via the “plot_ly” function to visualize hierarchical data with customized colors and a maximum depth of four levels.

Article Title: Metabolic phenotyping and global functional analysis facilitate metabolic signature discovery for tuberculosis treatment monitoring.
Article Snippet: Tracking alterations in polar metabolite and lipid levels during anti-tuberculosis (TB) interventions is an emerging biomarker discovery and validation approach due to its sensitivity in capturing changes and reflecting on the host status.. Here, we employed deep plasma metabolic phenotyping to explore the TB patient metabolome during three phases of treatment: at baseline, during intensive phase treatment, and upon treatment completion.. Differential metabolites (DMs) in each period were determined, and the pathway-level biological alterations were explored by untargeted metabolomics-guided functional interpretations that bypassed identification.

Article Title: Crosstalk between chromatin and Shavenbaby defines transcriptional output along the Drosophila intestinal stem cell lineage
Article Snippet: Plotly v4.9.3 , Sievert. , https://plotly.com/r/.



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