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BioKin Ltd dynafit program
Dynafit Program, supplied by BioKin Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/program+dynafit/dynafit+program/pm34085514-165-5-7
Average 90 stars, based on 1 article reviews
dynafit program - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

UV-Vis Spectroscopy:

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Host-guest model: The experimental data obtained using UV-Vis spectroscopy for each guest was fitted using nonlinear analysis with DynaFit program (Biokin Software)2 to the binding equation derived for 1:1 model porphyrin:imidazole group (non-cooperative model). ..

Software:

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Host-guest model: The experimental data obtained using UV-Vis spectroscopy for each guest was fitted using nonlinear analysis with DynaFit program (Biokin Software)2 to the binding equation derived for 1:1 model porphyrin:imidazole group (non-cooperative model). ..

Article Title: Supramolecular Catalysis of Acyl Transfer within Zinc Porphyrin-Based Metal-Organic Cages.
Article Snippet: To illustrate the supramolecular catalysis process in molecular containers, two porphyrinatozinc(II)-faced cubic cages with different sizes were synthesized and used to catalyze acyltransfer reactions between N-acetylimidazole (NAI) and various pyridylcarbinol (PC) regioisomers (2-PC, 3-PC, and 4-PC).. A systemic investigation of the supramolecular catalysis occurring within these two hosts was performed, in combination with a host− guest binding study and density functional theory calculations.. Compared to the reaction in a bulk solvent, the results that the reaction of 2-PC was found to be highly efficient with high rate enhancements (kcat/kuncat = 283 for Zn-1 and 442 for Zn-2), as well as the different efficiencies of the reactions with various ortho-substituted 2-PC substrates and NAI derivates should be attributed to the cages having preconcentrated and preoriented substrates.

Binding Assay:

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Host-guest model: The experimental data obtained using UV-Vis spectroscopy for each guest was fitted using nonlinear analysis with DynaFit program (Biokin Software)2 to the binding equation derived for 1:1 model porphyrin:imidazole group (non-cooperative model). ..

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Data obtained from the ultraviolet–visible titration were then fitted using nonlinear analysis with DynaFit programme (Biokin Software) to the binding equation derived for either 1:1 model (porphyrin:guest with one imidazole group) or 2:1 model (porphyrin:guest with two imidazole groups), except in the case of G7 . ..

Article Title: Supramolecular Catalysis of Acyl Transfer within Zinc Porphyrin-Based Metal-Organic Cages.
Article Snippet: To illustrate the supramolecular catalysis process in molecular containers, two porphyrinatozinc(II)-faced cubic cages with different sizes were synthesized and used to catalyze acyltransfer reactions between N-acetylimidazole (NAI) and various pyridylcarbinol (PC) regioisomers (2-PC, 3-PC, and 4-PC).. A systemic investigation of the supramolecular catalysis occurring within these two hosts was performed, in combination with a host− guest binding study and density functional theory calculations.. Compared to the reaction in a bulk solvent, the results that the reaction of 2-PC was found to be highly efficient with high rate enhancements (kcat/kuncat = 283 for Zn-1 and 442 for Zn-2), as well as the different efficiencies of the reactions with various ortho-substituted 2-PC substrates and NAI derivates should be attributed to the cages having preconcentrated and preoriented substrates.

Derivative Assay:

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Host-guest model: The experimental data obtained using UV-Vis spectroscopy for each guest was fitted using nonlinear analysis with DynaFit program (Biokin Software)2 to the binding equation derived for 1:1 model porphyrin:imidazole group (non-cooperative model). ..

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Data obtained from the ultraviolet–visible titration were then fitted using nonlinear analysis with DynaFit programme (Biokin Software) to the binding equation derived for either 1:1 model (porphyrin:guest with one imidazole group) or 2:1 model (porphyrin:guest with two imidazole groups), except in the case of G7 . ..

Article Title: Supramolecular Catalysis of Acyl Transfer within Zinc Porphyrin-Based Metal-Organic Cages.
Article Snippet: To illustrate the supramolecular catalysis process in molecular containers, two porphyrinatozinc(II)-faced cubic cages with different sizes were synthesized and used to catalyze acyltransfer reactions between N-acetylimidazole (NAI) and various pyridylcarbinol (PC) regioisomers (2-PC, 3-PC, and 4-PC).. A systemic investigation of the supramolecular catalysis occurring within these two hosts was performed, in combination with a host− guest binding study and density functional theory calculations.. Compared to the reaction in a bulk solvent, the results that the reaction of 2-PC was found to be highly efficient with high rate enhancements (kcat/kuncat = 283 for Zn-1 and 442 for Zn-2), as well as the different efficiencies of the reactions with various ortho-substituted 2-PC substrates and NAI derivates should be attributed to the cages having preconcentrated and preoriented substrates.

Control:

Article Title: Chikungunya nsP2 protease is not a papain-like cysteine protease and the catalytic dyad cysteine is interchangeable with a proximal serine.
Article Snippet: Protease activity was followed by continuously monitoring for 3 hr increasing fluorescence (substrate depletion) using a Beckman Coulter DTX880 multimode detector at 340 nm excitation and 430 nm emission wavelengths at 37 °C. .. To obtain the kinetic parameters, control curves with no enzyme were subtracted from the enzyme progress curves, which were then analyzed by Dynafit program© version 3.28.070 (BioKin, Ltd.)48. ..

Titration:

Article Title: Sequence-selective encapsulation and protection of long peptides by a self-assembled Fe II 8 L 6 cubic cage
Article Snippet: .. Data obtained from the ultraviolet–visible titration were then fitted using nonlinear analysis with DynaFit programme (Biokin Software) to the binding equation derived for either 1:1 model (porphyrin:guest with one imidazole group) or 2:1 model (porphyrin:guest with two imidazole groups), except in the case of G7 . ..

Article Title: Supramolecular Catalysis of Acyl Transfer within Zinc Porphyrin-Based Metal-Organic Cages.
Article Snippet: To illustrate the supramolecular catalysis process in molecular containers, two porphyrinatozinc(II)-faced cubic cages with different sizes were synthesized and used to catalyze acyltransfer reactions between N-acetylimidazole (NAI) and various pyridylcarbinol (PC) regioisomers (2-PC, 3-PC, and 4-PC).. A systemic investigation of the supramolecular catalysis occurring within these two hosts was performed, in combination with a host− guest binding study and density functional theory calculations.. Compared to the reaction in a bulk solvent, the results that the reaction of 2-PC was found to be highly efficient with high rate enhancements (kcat/kuncat = 283 for Zn-1 and 442 for Zn-2), as well as the different efficiencies of the reactions with various ortho-substituted 2-PC substrates and NAI derivates should be attributed to the cages having preconcentrated and preoriented substrates.

Comparison:

Article Title: Discovery of novel drug-like antitubercular hits targeting the MEP pathway enzyme DXPS by strategic application of ligand-based virtual screening
Article Snippet: .. Initial rate values were evaluated with a nonlinear regression method using the program Dynafit (Biokin, http://www.biokin.com/dynafit/).13 MOI information was achieved by comparison of IC50 values under different conditions in duplicates. ..

Fluorescence:

Article Title: Small-molecule allosteric inhibitors of BAX
Article Snippet: .. We used the program DYNAFIT (BioKin) to simulate the competition of BAI1 with vMIA and tested this using a fluorescence polarization assay with the vMIA peptide and BAX. ..

Concentration Assay:

Article Title: Flatbed-scanner-based colorimetric Cu2+ signaling system derived from a coumarin–benzopyrylium conjugated dye
Article Snippet: In this study, we developed a flatbed-scanner-based Cu-selective signaling method using a coumarin–benzopyrylium conjugated dye platform.. The designed sensors (CB-1 and CB-2) were readily synthesized by the reaction of coumarin–benzopyrylium hydrazide with salicylaldehyde or 2-hydroxynaphthaldehyde, respectively.. Sensor CB-1 exhibited pronounced colorimetric and fluorescence signaling behaviors toward Cu ions in 50% aqueous acetate buffered (pH 4.7) acetonitrile solution.

other:

Article Title: Interaction features of adenine DNA glycosylase MutY from E. coli with DNA substrates
Article Snippet: Kinetic characteristics of specific recognition of damaged base by the DNA glycosylase MutY in model DNA substrates, containing oxoG/A-, G/A-, oxoG/Cand F/G pairs in the central position, were investigated.. Conformational changes of the MutY enzyme during the recognition of the damaged base in DNA have been recorded by the change in the f luorescence intensity of tryptophan residues using the stopped-flow technique in real time.. DNA duplexes containing a f luorescein residue were used for the registration of DNA conformational changes.



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