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ms200 microarray scanner  (Roche)


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    Structured Review

    Roche ms200 microarray scanner
    Ms200 Microarray Scanner, supplied by Roche, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/ms200+microarray+scanner/pmc09820221-232-7-10
    Average 86 stars, based on 1 article reviews
    ms200 microarray scanner - by Bioz Stars, 2026-10
    86/100 stars

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    Related Articles

    Microarray:

    Article Title: Mechanism of slag-based silicate fertilizer suppressing methane emissions from paddies
    Article Snippet: The addition of electron acceptors to boost soil microbes competitive to methanogens could minimize methane (CH4) emissions from paddy soils.. To study the microbiological mechanisms underlying the suppression of CH4 emissions, silicate fertilizer made from blast furnace slag that contains electron acceptors, such as Fe, was applied to Japonica and Indica rice at a rate of 2 Mg ha 1.. We found that silicate fertilization significantly reduced CH4 emissions from Japonica and Indica rice by 21.1% and 25.7%, respectively, and the decrease in CH4 emissions coincided with an increase in iron reduction in paddy soils.

    Article Title: Cover crops offset recalcitrant soil organic carbon losses under plastic-film mulching by altering microbial functional genes
    Article Snippet: While cover crop residue (CR) incorporation offsets soil organic C (SOC) losses caused by plastic-film mulching (PFM), the microbial modulators and mechanisms of SOC accumulation remain poorly understood.. Using functional gene microarray, soil enzyme activities, and soil density fractionation approaches, we investigated the mechanism, by incorporating CR (13.0 and 9 Mg ha−1 on a dry weight basis) under PFM in organic maize cropping systems, spanning 2 consecutive years.. Compared to no-mulching, PFM without CR amendment significantly decreased SOC stock by 23%, corresponding to an increase in CO2 efflux by 74%, a decrease in light fraction C (LFOC) and heavy fraction C (HFOC) by 13 and 11%, respectively, and an increase in relative abundances of labile as well as recalcitrant C-degrading genes and related soil enzyme activities.

    Article Title: Warming effects on grassland soil microbial communities are amplified in cool months
    Article Snippet: .. Subsequently, slides were rinsed and scanned with a NimbleGen MS200 microarray scanner (Roche NimbleGen, Madison, WI, USA). ..

    Article Title: Deciphering pH-dependent microbial taxa and functional gene co-occurrence in the coral Galaxea fascicularis.
    Article Snippet: How the coral microbiome responds to oceanic pH changes due to anthropogenic climate change, including ocean acidification and deliberate artificial alkalization, remains an open question.. Here, we applied a 16S profile and GeoChip approach to microbial taxonomic and gene functional landscapes in the coral Galaxea fascicularis under three pH levels (7.85, 8.15, and 8.45) and tested the influence of pH changes on the cell growth of several coral-associated strains and bacterial populations.. Statistical analysis of GeoChip-based data suggested that both ocean acidification and alkalization destabilized functional cores related to aromatic degradation, carbon degradation, carbon fixation, stress response, and antibiotic biosynthesis in the microbiome, which are related to holobiont carbon cycling and health.

    Article Title: Abundant culturable diazotrophs within Actinomycetia rather than rare taxa are underlying inoculants for nitrogen promotion in desert soil
    Article Snippet: Desert soil may harbor various culturable diazotrophs that can endure multiple environmental stresses and promote ecological restoration.. To explore nitrogen-fixing microorganisms that can be potential inoculants for nutrition improvement in nitrogen-limited ecosystems and disclose whether rare taxa contribute to the nitrogen incorporation process, we collected soil from the Mu Us Desert and combined 16S rRNA high-throughput sequencing, functional gene arrays (GeoChip) method, and culture-dependent approaches to observe the composition and key groups of culturable diazotrophs.. Proteobacteria was the most dominant phylum, accounting for 73.07 % of the 823 operational taxonomic units (OTUs), grown in nitrogen-free media.

    Article Title: Consistent DNA Hypomethylations in Prostate Cancer
    Article Snippet: .. The hybridized arrays were scanned on an MS200 microarray scanner (Roche, Basel, Switzerland) at a resolution of 2 μm. ..

    Purification:

    Article Title: Cover crops offset recalcitrant soil organic carbon losses under plastic-film mulching by altering microbial functional genes
    Article Snippet: While cover crop residue (CR) incorporation offsets soil organic C (SOC) losses caused by plastic-film mulching (PFM), the microbial modulators and mechanisms of SOC accumulation remain poorly understood.. Using functional gene microarray, soil enzyme activities, and soil density fractionation approaches, we investigated the mechanism, by incorporating CR (13.0 and 9 Mg ha−1 on a dry weight basis) under PFM in organic maize cropping systems, spanning 2 consecutive years.. Compared to no-mulching, PFM without CR amendment significantly decreased SOC stock by 23%, corresponding to an increase in CO2 efflux by 74%, a decrease in light fraction C (LFOC) and heavy fraction C (HFOC) by 13 and 11%, respectively, and an increase in relative abundances of labile as well as recalcitrant C-degrading genes and related soil enzyme activities.

    Article Title: Abundant culturable diazotrophs within Actinomycetia rather than rare taxa are underlying inoculants for nitrogen promotion in desert soil
    Article Snippet: Desert soil may harbor various culturable diazotrophs that can endure multiple environmental stresses and promote ecological restoration.. To explore nitrogen-fixing microorganisms that can be potential inoculants for nutrition improvement in nitrogen-limited ecosystems and disclose whether rare taxa contribute to the nitrogen incorporation process, we collected soil from the Mu Us Desert and combined 16S rRNA high-throughput sequencing, functional gene arrays (GeoChip) method, and culture-dependent approaches to observe the composition and key groups of culturable diazotrophs.. Proteobacteria was the most dominant phylum, accounting for 73.07 % of the 823 operational taxonomic units (OTUs), grown in nitrogen-free media.

    Labeling:

    Article Title: Cover crops offset recalcitrant soil organic carbon losses under plastic-film mulching by altering microbial functional genes
    Article Snippet: While cover crop residue (CR) incorporation offsets soil organic C (SOC) losses caused by plastic-film mulching (PFM), the microbial modulators and mechanisms of SOC accumulation remain poorly understood.. Using functional gene microarray, soil enzyme activities, and soil density fractionation approaches, we investigated the mechanism, by incorporating CR (13.0 and 9 Mg ha−1 on a dry weight basis) under PFM in organic maize cropping systems, spanning 2 consecutive years.. Compared to no-mulching, PFM without CR amendment significantly decreased SOC stock by 23%, corresponding to an increase in CO2 efflux by 74%, a decrease in light fraction C (LFOC) and heavy fraction C (HFOC) by 13 and 11%, respectively, and an increase in relative abundances of labile as well as recalcitrant C-degrading genes and related soil enzyme activities.

    Article Title: Abundant culturable diazotrophs within Actinomycetia rather than rare taxa are underlying inoculants for nitrogen promotion in desert soil
    Article Snippet: Desert soil may harbor various culturable diazotrophs that can endure multiple environmental stresses and promote ecological restoration.. To explore nitrogen-fixing microorganisms that can be potential inoculants for nutrition improvement in nitrogen-limited ecosystems and disclose whether rare taxa contribute to the nitrogen incorporation process, we collected soil from the Mu Us Desert and combined 16S rRNA high-throughput sequencing, functional gene arrays (GeoChip) method, and culture-dependent approaches to observe the composition and key groups of culturable diazotrophs.. Proteobacteria was the most dominant phylum, accounting for 73.07 % of the 823 operational taxonomic units (OTUs), grown in nitrogen-free media.

    DNA Extraction:

    Article Title: Abundant culturable diazotrophs within Actinomycetia rather than rare taxa are underlying inoculants for nitrogen promotion in desert soil
    Article Snippet: Desert soil may harbor various culturable diazotrophs that can endure multiple environmental stresses and promote ecological restoration.. To explore nitrogen-fixing microorganisms that can be potential inoculants for nutrition improvement in nitrogen-limited ecosystems and disclose whether rare taxa contribute to the nitrogen incorporation process, we collected soil from the Mu Us Desert and combined 16S rRNA high-throughput sequencing, functional gene arrays (GeoChip) method, and culture-dependent approaches to observe the composition and key groups of culturable diazotrophs.. Proteobacteria was the most dominant phylum, accounting for 73.07 % of the 823 operational taxonomic units (OTUs), grown in nitrogen-free media.



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