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Schmid GmbH microarray
Microarray, supplied by Schmid GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/microarray-based+mrna+profiling+data/microarray/pm27549386-83-8-11
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microarray - by Bioz Stars, 2026-09
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Article Title: Epigenetic repression of male gametophyte-specific genes in the Arabidopsis sporophyte.
Article Snippet: DISCuSSION Definition of Pollen-Specific Genes In this study, two data sets for pollen-specific genes were created, based on microarray (Schmid et al., 2005) and RNA sequencing data (Loraine et al., 2013), respectively.

Article Title: Epigenetic repression of male gametophyte-specific genes in the Arabidopsis sporophyte.
Article Snippet: Our approach of identifying pollen-specific genes was based on microarray experiments (Schmid et al., 2005).

Article Title: Identification of the AQP members involved in abiotic stress responses from Arabidopsis.
Article Snippet: Accepted Manuscript Identification of the AQP members involved in abiotic stress responses from Arabidopsis Zhi-Juan Feng, Sheng-Chun Xu, Na Liu, Gu-Wen Zhang, Qi-Zan Hu, Zhao-Shi Xu, Ya-Ming Gong PII: S0378-1119(17)31108-3 DOI: https://doi.org/10.1016/j.gene.2017.12.048 Reference: GENE 42434 To appear in: Gene Received date: 13 December 2017 Accepted date: 22 December 2017 Please cite this article as: Zhi-Juan Feng, Sheng-Chun Xu, Na Liu, Gu-Wen Zhang, Qi-Zan Hu, Zhao-Shi Xu, Ya-Ming Gong , Identification of the AQP members involved in abiotic stress responses from Arabidopsis.. The address for the corresponding author was captured as affiliation for all authors.. Please check if appropriate.

Microarray:

Article Title: Large-scale atlas of microarray data reveals the distinct expression landscape of different tissues in Arabidopsis.
Article Snippet: .. Schmid et al. analyzed about 3,000 human microarray expression profiles and showed that critical genes related to breast cancer, such as ADIPOQ and PPARA, could be identified by reanalysis of those data (Schmid et al., 2012). ..

Article Title: A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling.
Article Snippet: This article has been accepted for publication and undergone full peer review but has not been through the copyediting, typesetting, pagination and proofreading process, which may lead to differences between this version and the Version of Record.. Please cite this article as doi: 10.1111/tpj.13312 This article is protected by copyright.. All rights reserved.

Article Title: Regulation of the Regulators: Post-Translational Modifications, Subcellular, and Spatiotemporal Distribution of Plant 14-3-3 Proteins
Article Snippet: .. Subsequent microarray technologies allowed for a comprehensive analysis of 14-3-3 expression profiles (Schmid et al., ; Winter et al., ). ..

Article Title: Epidermal jasmonate perception is sufficient for all aspects of jasmonate-mediated male fertility in Arabidopsis.
Article Snippet: .. LTP1 RNA was detected in floral Stage 12 anthers © 2016 The Authors The Plant Journal © 2016 John Wiley & Sons Ltd, The Plant Journal, (2016), 85, 634–647 by in situ hybridization (Thoma et al., 1994) and by microarray analysis (Schmid et al., 2005). ..

Article Title: A temporal regulatory mechanism controls the different contribution of endoplasmic reticulum and plastidial ω-3 desaturases to trienoic fatty acid content during leaf development in soybean (Glycine max cv Volania).
Article Snippet: .. Data from Arabidopsis (dicotyledonous 16:3 plant) were available at the eFP browser (http://bar.utoronto.ca/efp/cgi-bin/efpWeb.cgi) obtained during the microarray analysis during plant development (Schmid et al., 2005). ..

Expressing:

Article Title: Large-scale atlas of microarray data reveals the distinct expression landscape of different tissues in Arabidopsis.
Article Snippet: .. Schmid et al. analyzed about 3,000 human microarray expression profiles and showed that critical genes related to breast cancer, such as ADIPOQ and PPARA, could be identified by reanalysis of those data (Schmid et al., 2012). ..

Article Title: Regulation of the Regulators: Post-Translational Modifications, Subcellular, and Spatiotemporal Distribution of Plant 14-3-3 Proteins
Article Snippet: .. Subsequent microarray technologies allowed for a comprehensive analysis of 14-3-3 expression profiles (Schmid et al., ; Winter et al., ). ..

In Situ Hybridization:

Article Title: Epidermal jasmonate perception is sufficient for all aspects of jasmonate-mediated male fertility in Arabidopsis.
Article Snippet: .. LTP1 RNA was detected in floral Stage 12 anthers © 2016 The Authors The Plant Journal © 2016 John Wiley & Sons Ltd, The Plant Journal, (2016), 85, 634–647 by in situ hybridization (Thoma et al., 1994) and by microarray analysis (Schmid et al., 2005). ..



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Rank correlations between  microarray-  and real-time quantitative PCR–based gene expression

Journal: Proceedings of the National Academy of Sciences of the United States of America

Article Title: Molecular transitions from papillomavirus infection to cervical precancer and cancer: Role of stromal estrogen receptor signaling

doi: 10.1073/pnas.1509322112

Figure Lengend Snippet: Rank correlations between microarray- and real-time quantitative PCR–based gene expression

Article Snippet: An additional cryosection from each of 16 normal specimens, 13 CIN1/CIN2 specimens, 23 CIN3 specimens, and 16 cancer specimens was used to independently validate the Affymetrix microarray-based mRNA profiling data by RTQ-PCR.

Techniques: Microarray

Expression of genes encoding ribosomal proteins and mitochondrial electron transport chain complexes I, III, IV, and V is reduced at the transition from CIN3 to cancer. (A) Twenty-four small and 35 large ribosomal subunit proteins (∼70% of all ribosomal proteins) are expressed at statistically significant reduced levels in cancers compared with precancerous CIN3 lesions. Histograms show measurements in cancers by all 177 Affymetrix microarray probe sets for ribosomal protein-encoding genes, normalized to levels measured in CIN3s. (B) Green dots in the five complexes of the mitochondrial electron transport chain indicate proteins with reduced gene expression in cancers. Box plots (Tukey) show the average distribution of gene expression of all differentially expressed ETC complex I, III, IV, and V components (median levels are in red).

Journal: Proceedings of the National Academy of Sciences of the United States of America

Article Title: Molecular transitions from papillomavirus infection to cervical precancer and cancer: Role of stromal estrogen receptor signaling

doi: 10.1073/pnas.1509322112

Figure Lengend Snippet: Expression of genes encoding ribosomal proteins and mitochondrial electron transport chain complexes I, III, IV, and V is reduced at the transition from CIN3 to cancer. (A) Twenty-four small and 35 large ribosomal subunit proteins (∼70% of all ribosomal proteins) are expressed at statistically significant reduced levels in cancers compared with precancerous CIN3 lesions. Histograms show measurements in cancers by all 177 Affymetrix microarray probe sets for ribosomal protein-encoding genes, normalized to levels measured in CIN3s. (B) Green dots in the five complexes of the mitochondrial electron transport chain indicate proteins with reduced gene expression in cancers. Box plots (Tukey) show the average distribution of gene expression of all differentially expressed ETC complex I, III, IV, and V components (median levels are in red).

Article Snippet: An additional cryosection from each of 16 normal specimens, 13 CIN1/CIN2 specimens, 23 CIN3 specimens, and 16 cancer specimens was used to independently validate the Affymetrix microarray-based mRNA profiling data by RTQ-PCR.

Techniques: Expressing, Microarray

Differential expression of estrogen-responsive genes correlates strongly with cervical cancer progression. (A) Hierarchical clustering of 128 specimens based on changes in gene expression measured by 365 Affymetrix probe sets measuring expression of 217 estrogen-responsive genes shows strong correlation with disease progression. (B) Box plots (Tukey) show the distribution of Affymetrix microarray-based gene expression measurements of CDKN2A (p16), ERα, and estrogen-responsive genes GREB1, PGR1, and AR. White and red horizontal lines indicate median expression levels.

Journal: Proceedings of the National Academy of Sciences of the United States of America

Article Title: Molecular transitions from papillomavirus infection to cervical precancer and cancer: Role of stromal estrogen receptor signaling

doi: 10.1073/pnas.1509322112

Figure Lengend Snippet: Differential expression of estrogen-responsive genes correlates strongly with cervical cancer progression. (A) Hierarchical clustering of 128 specimens based on changes in gene expression measured by 365 Affymetrix probe sets measuring expression of 217 estrogen-responsive genes shows strong correlation with disease progression. (B) Box plots (Tukey) show the distribution of Affymetrix microarray-based gene expression measurements of CDKN2A (p16), ERα, and estrogen-responsive genes GREB1, PGR1, and AR. White and red horizontal lines indicate median expression levels.

Article Snippet: An additional cryosection from each of 16 normal specimens, 13 CIN1/CIN2 specimens, 23 CIN3 specimens, and 16 cancer specimens was used to independently validate the Affymetrix microarray-based mRNA profiling data by RTQ-PCR.

Techniques: Expressing, Microarray