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microarray analysis suite 5.0 software package  (Thermo Fisher)


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    Thermo Fisher microarray analysis suite 5.0 software package
    Microarray Analysis Suite 5.0 Software Package, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+software+packages/genechip+microarray+suite+5+0/pm30277821-54-12-18
    Average 90 stars, based on 1 article reviews
    microarray analysis suite 5.0 software package - by Bioz Stars, 2026-11
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: Calorie restriction prevents diet-induced insulin resistance independently of PGC-1-driven mitochondrial biogenesis in white adipose tissue.
    Article Snippet: The arrays were scanned, and the resulting images were processed with the Microarray Analysis Suite 5.0 software package (Thermo Fisher Scientific).

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues .

    Article Title: Basic Gene Expression Characteristics of Glioma Stem Cells and Human Glioblastoma.
    Article Snippet: A single array analysis was conducted using Microarray Suite version 5.0 (Thermo Fisher Scientific) with the Thermo Fisher Scientific default settings and the global scaling method to normalize the intensities.

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma.
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues31.

    Article Title: The Use of the Random Number Generator and Artificial Intelligence Analysis for Dimensionality Reduction of Follicular Lymphoma Transcriptomic Data
    Article Snippet: The data were analyzed using the microarray suite version 5.0 (MAS 5.0) using the Affymetrix (ThermoFisher, Waltham, WA, USA), default settings and global scaling as the normalization method.

    Article Title: Intestinal microbiota contributes to colonic epithelial changes in simulated microgravity mouse model
    Article Snippet: Exposure tomicrogravity leads to alterations inmultiple systems, butmicrogravity-related changes in the gastrointestinal tract and its clinical significancehave not beenwell studied.Weused the hindlimbunloading (HU) mousemodel to simulate amicrogravity condition and investigated the changes in intestinalmicrobiota and colonic epithelial cells.Comparedwithground controls (Ctrls),HUaffected fecalmicrobiota compositionwith aprofile that was characterized by the expansion of Firmicutes and decrease of Bacteroidetes.. The colon epithelium of HUmice showed decreased goblet cell numbers, reduced epithelial cell turnover, and decreased expression of genes that are involved in defense and inflammatory responses.. As a result, increased susceptibility to dextran sulfate sodium– induced epithelial injury was observed in HU mice.

    Article Title: TDP-43 regulates early-phase insulin secretion via CaV1.2-mediated exocytosis in islets
    Article Snippet: Biotinylated cRNA was prepared using GeneChip 3′IVT PLUS Reagent Kit (Thermo Fisher Scientific) according to the manufacturer’s standard protocol from 100 ng total RNA.

    Expressing:

    Article Title: Calorie restriction prevents diet-induced insulin resistance independently of PGC-1-driven mitochondrial biogenesis in white adipose tissue.
    Article Snippet: The arrays were scanned, and the resulting images were processed with the Microarray Analysis Suite 5.0 software package (Thermo Fisher Scientific).

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues .

    Article Title: Basic Gene Expression Characteristics of Glioma Stem Cells and Human Glioblastoma.
    Article Snippet: A single array analysis was conducted using Microarray Suite version 5.0 (Thermo Fisher Scientific) with the Thermo Fisher Scientific default settings and the global scaling method to normalize the intensities.

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma.
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues31.

    Article Title: The Use of the Random Number Generator and Artificial Intelligence Analysis for Dimensionality Reduction of Follicular Lymphoma Transcriptomic Data
    Article Snippet: The data were analyzed using the microarray suite version 5.0 (MAS 5.0) using the Affymetrix (ThermoFisher, Waltham, WA, USA), default settings and global scaling as the normalization method.

    Article Title: Intestinal microbiota contributes to colonic epithelial changes in simulated microgravity mouse model
    Article Snippet: Exposure tomicrogravity leads to alterations inmultiple systems, butmicrogravity-related changes in the gastrointestinal tract and its clinical significancehave not beenwell studied.Weused the hindlimbunloading (HU) mousemodel to simulate amicrogravity condition and investigated the changes in intestinalmicrobiota and colonic epithelial cells.Comparedwithground controls (Ctrls),HUaffected fecalmicrobiota compositionwith aprofile that was characterized by the expansion of Firmicutes and decrease of Bacteroidetes.. The colon epithelium of HUmice showed decreased goblet cell numbers, reduced epithelial cell turnover, and decreased expression of genes that are involved in defense and inflammatory responses.. As a result, increased susceptibility to dextran sulfate sodium– induced epithelial injury was observed in HU mice.

    Article Title: TDP-43 regulates early-phase insulin secretion via CaV1.2-mediated exocytosis in islets
    Article Snippet: Biotinylated cRNA was prepared using GeneChip 3′IVT PLUS Reagent Kit (Thermo Fisher Scientific) according to the manufacturer’s standard protocol from 100 ng total RNA.

    Software:

    Article Title: Calorie restriction prevents diet-induced insulin resistance independently of PGC-1-driven mitochondrial biogenesis in white adipose tissue.
    Article Snippet: The arrays were scanned, and the resulting images were processed with the Microarray Analysis Suite 5.0 software package (Thermo Fisher Scientific).

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues .

    Article Title: Basic Gene Expression Characteristics of Glioma Stem Cells and Human Glioblastoma.
    Article Snippet: A single array analysis was conducted using Microarray Suite version 5.0 (Thermo Fisher Scientific) with the Thermo Fisher Scientific default settings and the global scaling method to normalize the intensities.

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma.
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues31.

    Article Title: The Use of the Random Number Generator and Artificial Intelligence Analysis for Dimensionality Reduction of Follicular Lymphoma Transcriptomic Data
    Article Snippet: The data were analyzed using the microarray suite version 5.0 (MAS 5.0) using the Affymetrix (ThermoFisher, Waltham, WA, USA), default settings and global scaling as the normalization method.

    Article Title: Intestinal microbiota contributes to colonic epithelial changes in simulated microgravity mouse model
    Article Snippet: Exposure tomicrogravity leads to alterations inmultiple systems, butmicrogravity-related changes in the gastrointestinal tract and its clinical significancehave not beenwell studied.Weused the hindlimbunloading (HU) mousemodel to simulate amicrogravity condition and investigated the changes in intestinalmicrobiota and colonic epithelial cells.Comparedwithground controls (Ctrls),HUaffected fecalmicrobiota compositionwith aprofile that was characterized by the expansion of Firmicutes and decrease of Bacteroidetes.. The colon epithelium of HUmice showed decreased goblet cell numbers, reduced epithelial cell turnover, and decreased expression of genes that are involved in defense and inflammatory responses.. As a result, increased susceptibility to dextran sulfate sodium– induced epithelial injury was observed in HU mice.

    Article Title: TDP-43 regulates early-phase insulin secretion via CaV1.2-mediated exocytosis in islets
    Article Snippet: Biotinylated cRNA was prepared using GeneChip 3′IVT PLUS Reagent Kit (Thermo Fisher Scientific) according to the manufacturer’s standard protocol from 100 ng total RNA.

    Gene Expression:

    Article Title: Calorie restriction prevents diet-induced insulin resistance independently of PGC-1-driven mitochondrial biogenesis in white adipose tissue.
    Article Snippet: The arrays were scanned, and the resulting images were processed with the Microarray Analysis Suite 5.0 software package (Thermo Fisher Scientific).

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues .

    Article Title: Basic Gene Expression Characteristics of Glioma Stem Cells and Human Glioblastoma.
    Article Snippet: A single array analysis was conducted using Microarray Suite version 5.0 (Thermo Fisher Scientific) with the Thermo Fisher Scientific default settings and the global scaling method to normalize the intensities.

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma.
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues31.

    Article Title: The Use of the Random Number Generator and Artificial Intelligence Analysis for Dimensionality Reduction of Follicular Lymphoma Transcriptomic Data
    Article Snippet: The data were analyzed using the microarray suite version 5.0 (MAS 5.0) using the Affymetrix (ThermoFisher, Waltham, WA, USA), default settings and global scaling as the normalization method.

    Article Title: Intestinal microbiota contributes to colonic epithelial changes in simulated microgravity mouse model
    Article Snippet: Exposure tomicrogravity leads to alterations inmultiple systems, butmicrogravity-related changes in the gastrointestinal tract and its clinical significancehave not beenwell studied.Weused the hindlimbunloading (HU) mousemodel to simulate amicrogravity condition and investigated the changes in intestinalmicrobiota and colonic epithelial cells.Comparedwithground controls (Ctrls),HUaffected fecalmicrobiota compositionwith aprofile that was characterized by the expansion of Firmicutes and decrease of Bacteroidetes.. The colon epithelium of HUmice showed decreased goblet cell numbers, reduced epithelial cell turnover, and decreased expression of genes that are involved in defense and inflammatory responses.. As a result, increased susceptibility to dextran sulfate sodium– induced epithelial injury was observed in HU mice.

    Article Title: TDP-43 regulates early-phase insulin secretion via CaV1.2-mediated exocytosis in islets
    Article Snippet: Biotinylated cRNA was prepared using GeneChip 3′IVT PLUS Reagent Kit (Thermo Fisher Scientific) according to the manufacturer’s standard protocol from 100 ng total RNA.

    Control:

    Article Title: Calorie restriction prevents diet-induced insulin resistance independently of PGC-1-driven mitochondrial biogenesis in white adipose tissue.
    Article Snippet: The arrays were scanned, and the resulting images were processed with the Microarray Analysis Suite 5.0 software package (Thermo Fisher Scientific).

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues .

    Article Title: Basic Gene Expression Characteristics of Glioma Stem Cells and Human Glioblastoma.
    Article Snippet: A single array analysis was conducted using Microarray Suite version 5.0 (Thermo Fisher Scientific) with the Thermo Fisher Scientific default settings and the global scaling method to normalize the intensities.

    Article Title: The LRRC8-mediated volume-regulated anion channel is altered in glaucoma.
    Article Snippet: Affymetrix GeneChip Microarray Suite 5.0 (Affymetrix, ThermoFisher Scientific) and 7.3.1 GeneSpring GX Expression Analysis software (Agilent Technologies) were used to analyse differential gene expression between high P and control P TM tissues31.

    Article Title: The Use of the Random Number Generator and Artificial Intelligence Analysis for Dimensionality Reduction of Follicular Lymphoma Transcriptomic Data
    Article Snippet: The data were analyzed using the microarray suite version 5.0 (MAS 5.0) using the Affymetrix (ThermoFisher, Waltham, WA, USA), default settings and global scaling as the normalization method.

    Article Title: Intestinal microbiota contributes to colonic epithelial changes in simulated microgravity mouse model
    Article Snippet: Exposure tomicrogravity leads to alterations inmultiple systems, butmicrogravity-related changes in the gastrointestinal tract and its clinical significancehave not beenwell studied.Weused the hindlimbunloading (HU) mousemodel to simulate amicrogravity condition and investigated the changes in intestinalmicrobiota and colonic epithelial cells.Comparedwithground controls (Ctrls),HUaffected fecalmicrobiota compositionwith aprofile that was characterized by the expansion of Firmicutes and decrease of Bacteroidetes.. The colon epithelium of HUmice showed decreased goblet cell numbers, reduced epithelial cell turnover, and decreased expression of genes that are involved in defense and inflammatory responses.. As a result, increased susceptibility to dextran sulfate sodium– induced epithelial injury was observed in HU mice.

    Article Title: TDP-43 regulates early-phase insulin secretion via CaV1.2-mediated exocytosis in islets
    Article Snippet: Biotinylated cRNA was prepared using GeneChip 3′IVT PLUS Reagent Kit (Thermo Fisher Scientific) according to the manufacturer’s standard protocol from 100 ng total RNA.



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    A, Electrophoresis of whole serum (WS) or fractionated serum IgG derived from a systemic lupus erythematosus (SLE) patient (L) and a normal subject (N). Molecular weight marker (M) is shown at the right. B, Scatterplot of entire gene set considered by <t>microarray</t> analysis to be expressed in podocytes (P < 0.05). The position of each dot on the scatterplot corresponds to the normalized average signal intensity (log scale) of a single gene. The normalized average signal intensity after exposure to SLE IgG and normal IgG is shown on the x and y axes, respectively. Broken red lines represent normal IgG:SLE IgG ratios of 2.0 (top; 2-fold greater expression in normal IgG) and 0.5 (bottom; 2-fold greater expression in SLE IgG). Black broken line is the mean.
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    Image Search Results


    A, Electrophoresis of whole serum (WS) or fractionated serum IgG derived from a systemic lupus erythematosus (SLE) patient (L) and a normal subject (N). Molecular weight marker (M) is shown at the right. B, Scatterplot of entire gene set considered by microarray analysis to be expressed in podocytes (P < 0.05). The position of each dot on the scatterplot corresponds to the normalized average signal intensity (log scale) of a single gene. The normalized average signal intensity after exposure to SLE IgG and normal IgG is shown on the x and y axes, respectively. Broken red lines represent normal IgG:SLE IgG ratios of 2.0 (top; 2-fold greater expression in normal IgG) and 0.5 (bottom; 2-fold greater expression in SLE IgG). Black broken line is the mean.

    Journal: Arthritis & rheumatology (Hoboken, N.J.)

    Article Title: Lupus Nephritis IgG Induction of Calcium/Calmodulin-Dependent Protein Kinase IV Expression in Podocytes and Alteration of Their Function

    doi: 10.1002/art.39499

    Figure Lengend Snippet: A, Electrophoresis of whole serum (WS) or fractionated serum IgG derived from a systemic lupus erythematosus (SLE) patient (L) and a normal subject (N). Molecular weight marker (M) is shown at the right. B, Scatterplot of entire gene set considered by microarray analysis to be expressed in podocytes (P < 0.05). The position of each dot on the scatterplot corresponds to the normalized average signal intensity (log scale) of a single gene. The normalized average signal intensity after exposure to SLE IgG and normal IgG is shown on the x and y axes, respectively. Broken red lines represent normal IgG:SLE IgG ratios of 2.0 (top; 2-fold greater expression in normal IgG) and 0.5 (bottom; 2-fold greater expression in SLE IgG). Black broken line is the mean.

    Article Snippet: Scan data images were analyzed using the Microarray Data Analysis Tool software package (Filgen), a comprehensive program that also produced the gene ontology and Z score reports.

    Techniques: Electrophoresis, Derivative Assay, Molecular Weight, Marker, Microarray, Expressing