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CombiMatrix microarray imager software
Microarray Imager Software, supplied by CombiMatrix, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/microarray+image+files/microarray+imager+software/pm19924155-62-9-12
Average 90 stars, based on 1 article reviews
microarray imager software - by Bioz Stars, 2026-09
90/100 stars

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Related Articles

Microarray:

Article Title: Correction: High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera
Article Snippet: Hybridization and washing were performed as indicated by CombiMatrix. .. Slides were scanned with a Perkin Elmer Scanarray 4000 XL raw data was extracted with Scanarray Express 4.0 and Microarray Imager (CombiMatrix) software. ..

Article Title: Response of the goat mammary gland to infection with Staphylococcus aureus revealed by gene expression profiling in milk somatic and white blood cells
Article Snippet: .. The hybridised arrays were scanned with a GenePix 4000B microarray scanner (Axon, Toronto, CA) and the images (TIF format) were exported to the CombiMatrix Microarray Imager Software, to perform quality checks of the hybridizations and the spots on the slide. ..

Article Title: Seasonal Changes in Bacterial and Archaeal Gene Expression Patterns across Salinity Gradients in the Columbia River Coastal Margin
Article Snippet: .. Hybridization images were obtained using a ScanArray 4000 fluorescent scanner (PerkinElmer, Waltham, MA) at 5 micron resolution, and quantified with Microarray Imager software (CombiMatrix). .. For microarray re-use, the labeled targets were chemically denatured and removed from microarray probes as described in the CombiMatrix stripping protocol ( http://www.combimatrix.com/docs/PTL002_01_4x2K_StrippingReHyb.pdf ).

Article Title: Combining next-generation pyrosequencing with microarray for large scale expression analysis in non-model species
Article Snippet: .. Data extraction was done using CombiMatrix Microarray Imager software and a quantile normalization of data was performed using Combimatrix Blist v0.6 software. ..

Article Title: Common bean ( Phaseolus vulgaris L.) PvTIFY orchestrates global changes in transcript profile response to jasmonate and phosphorus deficiency
Article Snippet: .. The raw intensity data were first processed using the Combimatrix Microarray Imager software. ..

Software:

Article Title: Correction: High throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera
Article Snippet: Hybridization and washing were performed as indicated by CombiMatrix. .. Slides were scanned with a Perkin Elmer Scanarray 4000 XL raw data was extracted with Scanarray Express 4.0 and Microarray Imager (CombiMatrix) software. ..

Article Title: Response of the goat mammary gland to infection with Staphylococcus aureus revealed by gene expression profiling in milk somatic and white blood cells
Article Snippet: .. The hybridised arrays were scanned with a GenePix 4000B microarray scanner (Axon, Toronto, CA) and the images (TIF format) were exported to the CombiMatrix Microarray Imager Software, to perform quality checks of the hybridizations and the spots on the slide. ..

Article Title: Seasonal Changes in Bacterial and Archaeal Gene Expression Patterns across Salinity Gradients in the Columbia River Coastal Margin
Article Snippet: .. Hybridization images were obtained using a ScanArray 4000 fluorescent scanner (PerkinElmer, Waltham, MA) at 5 micron resolution, and quantified with Microarray Imager software (CombiMatrix). .. For microarray re-use, the labeled targets were chemically denatured and removed from microarray probes as described in the CombiMatrix stripping protocol ( http://www.combimatrix.com/docs/PTL002_01_4x2K_StrippingReHyb.pdf ).

Article Title: Combining next-generation pyrosequencing with microarray for large scale expression analysis in non-model species
Article Snippet: .. Data extraction was done using CombiMatrix Microarray Imager software and a quantile normalization of data was performed using Combimatrix Blist v0.6 software. ..

Article Title: Common bean ( Phaseolus vulgaris L.) PvTIFY orchestrates global changes in transcript profile response to jasmonate and phosphorus deficiency
Article Snippet: .. The raw intensity data were first processed using the Combimatrix Microarray Imager software. ..

other:

Article Title: General and species-specific transcriptional responses to downy mildew infection in a susceptible ( Vitis vinifera ) and a resistant ( V. riparia ) grapevine species
Article Snippet: The array was scanned with a ScanArray 4000XL (Perkin-Elmer, USA) and TIF images were exported to Microarray Imager 5.8 (CombiMatrix, USA) for densitometric analysis.

Article Title: Resistance to Plasmopara viticola in a grapevine segregating population is associated with stilbenoid accumulation and with specific host transcriptional responses
Article Snippet: The arrays were scanned with a ScanArray4000XL (Perkin Elmer, USA) and TIF images were exported to MicroArray Imager 5.8 (Combimatrix, USA) for densometric analysis.

Article Title: Common bean ( Phaseolus vulgaris L.) PvTIFY orchestrates global changes in transcript profile response to jasmonate and phosphorus deficiency
Article Snippet: After hybridization and washing, the microarray was dipped in imaging solution, covered with LifterSlipTM, and then scanned using a GenePix 4000B microarray scanner (Axon) and the accompanying acquisition software (CombiMatrix Microarray Imager Software).

Hybridization:

Article Title: Seasonal Changes in Bacterial and Archaeal Gene Expression Patterns across Salinity Gradients in the Columbia River Coastal Margin
Article Snippet: .. Hybridization images were obtained using a ScanArray 4000 fluorescent scanner (PerkinElmer, Waltham, MA) at 5 micron resolution, and quantified with Microarray Imager software (CombiMatrix). .. For microarray re-use, the labeled targets were chemically denatured and removed from microarray probes as described in the CombiMatrix stripping protocol ( http://www.combimatrix.com/docs/PTL002_01_4x2K_StrippingReHyb.pdf ).

Extraction:

Article Title: Combining next-generation pyrosequencing with microarray for large scale expression analysis in non-model species
Article Snippet: .. Data extraction was done using CombiMatrix Microarray Imager software and a quantile normalization of data was performed using Combimatrix Blist v0.6 software. ..



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Image Search Results


Y-axis shows mRNA expression levels [–DCt values (Ct reference–Ct target)] derived from qPCR experiments whereas the X-axis shows the log2 normalized microarray expression signal intensities. Correlations were considered significant when p<0.05. ρ = correlation coefficient.

Journal: PLoS ONE

Article Title: Dynamic Gene Expression in the Human Cerebral Cortex Distinguishes Children from Adults

doi: 10.1371/journal.pone.0037714

Figure Lengend Snippet: Y-axis shows mRNA expression levels [–DCt values (Ct reference–Ct target)] derived from qPCR experiments whereas the X-axis shows the log2 normalized microarray expression signal intensities. Correlations were considered significant when p<0.05. ρ = correlation coefficient.

Article Snippet: Microarray image files collected for this project are MIAME (Minimum Information about a Microarray Experiment ) compliant and have been deposited in the National Center for Biotechnology Information's Gene Expression Omnibus (GEO) data repository under the series accession number GSE37721.

Techniques: Expressing, Derivative Assay, Microarray