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gene expression microarray experiments  (DNA Chip Research Inc)

 
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    DNA Chip Research Inc gene expression microarray experiments
    Gene Expression Microarray Experiments, supplied by DNA Chip Research Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+gene+expression+datasets/gene+expression+microarray+experiments/pm38169039-67-112-121
    Average 90 stars, based on 1 article reviews
    gene expression microarray experiments - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: Trisomy 12 compromises the mesendodermal differentiation propensity of human pluripotent stem cells.
    Article Snippet: 1 3 A H9 H9(+12) B C H9 Ectoderm Mesoderm Endoderm H9 (+12) Lo g 2 In te ns ity R at io Chromosome Number ED Phase Contrast H9 H9 (+12) F H9 (+12) Anti-OCT4 H9(+12) / H9 0.000001 0.00001 0.0001 0.001 0.01 0.1 1 DN MT 3B FG F4 GD F3 JA RID 2 KL F5 LE FT Y1 LE FT Y2MY C NA NO G NO DA L NR 5A 2 PO U5 F1 SM AD 1 SO X2 TB X3 TR IM 22 H9 H9(+12) H9 G 0 1000000 2000000 3000000 4000000 0 2 4 6 C el l N um be r Culture Days H9 H9(+12) 1 3 Microarray analysis Gene expression microarray experiments were performed by DNA Chip Research Inc (Tokyo, Japan).

    Gene Expression:

    Article Title: Trisomy 12 compromises the mesendodermal differentiation propensity of human pluripotent stem cells.
    Article Snippet: 1 3 A H9 H9(+12) B C H9 Ectoderm Mesoderm Endoderm H9 (+12) Lo g 2 In te ns ity R at io Chromosome Number ED Phase Contrast H9 H9 (+12) F H9 (+12) Anti-OCT4 H9(+12) / H9 0.000001 0.00001 0.0001 0.001 0.01 0.1 1 DN MT 3B FG F4 GD F3 JA RID 2 KL F5 LE FT Y1 LE FT Y2MY C NA NO G NO DA L NR 5A 2 PO U5 F1 SM AD 1 SO X2 TB X3 TR IM 22 H9 H9(+12) H9 G 0 1000000 2000000 3000000 4000000 0 2 4 6 C el l N um be r Culture Days H9 H9(+12) 1 3 Microarray analysis Gene expression microarray experiments were performed by DNA Chip Research Inc (Tokyo, Japan).



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    Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).

    Journal: Biomolecules and Biomedicine

    Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

    doi: 10.17305/bb.2025.13221

    Figure Lengend Snippet: Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).

    Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

    Techniques:

    Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.

    Journal: Biomolecules and Biomedicine

    Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

    doi: 10.17305/bb.2025.13221

    Figure Lengend Snippet: Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.

    Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

    Techniques:

    Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.

    Journal: Biomolecules and Biomedicine

    Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

    doi: 10.17305/bb.2025.13221

    Figure Lengend Snippet: Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.

    Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

    Techniques: Functional Assay

    Journal: bioRxiv

    Article Title: Integrative Multi-Omic Profiling of the Human Phosphatome Identifies DUSP15 as a Tumour-Selective Regulator of Immune-Metabolic Reprogramming in Chromophobe Renal Cell Carcinoma

    doi: 10.1101/2025.11.15.688610

    Figure Lengend Snippet:

    Article Snippet: Gene Expression Omnibus (GEO) microarray datasets used for independent validation were obtained from the National Center for Biotechnology Information (NCBI) GEO repository ( https://www.ncbi.nlm.nih.gov/geo/ ) under accession numbers GSE2748, GSE11024, GSE11151, GSE12090, GSE16441, GSE17895, GSE19982, GSE36895, GSE46699, and GSE53757.

    Techniques: Expressing, Microarray