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whole-genome microarray  (CEM Corporation)

 
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    Structured Review

    CEM Corporation whole-genome microarray
    <t> Whole-genome microarray </t> data on electroporated cells
    Whole Genome Microarray, supplied by CEM Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+gene+expression+datasets/gene+expression+microarray+analysis/pmc02995144-230-17-25
    Average 90 stars, based on 1 article reviews
    whole-genome microarray - by Bioz Stars, 2026-09
    90/100 stars

    Images

    1) Product Images from "Optimization and evaluation of electroporation delivery of siRNA in the human leukemic CEM cell line"

    Article Title: Optimization and evaluation of electroporation delivery of siRNA in the human leukemic CEM cell line

    Journal: Cytotechnology

    doi: 10.1007/s10616-010-9309-6

    Whole-genome microarray data on electroporated cells
    Figure Legend Snippet: Whole-genome microarray data on electroporated cells

    Techniques Used: Microarray, Control, Negative Control

    Related Articles

    Microarray:

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. The microarray data obtained in the present study are available in the following database. (1) Human exon microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193574) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193574 ; (2) Human gene expression microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193576) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193576 . ..

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEMControl), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Data Availability Statement: The microarray data obtained in the present study are available in the following database. (1) Human exon microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193574) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193574; (2) Human gene expression microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193576) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193576. ..

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEM-Control), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Article Title: Vesicular Stomatitis Virus Transcription Is Inhibited by TRIM69 in the Interferon-Induced Antiviral State
    Article Snippet: .. The 400 most-IFN- -inducible ISGs were chosen using a compilation of microarray data from 293T, HT1080, CEM, Jurkat, MT2, MT4, C8166, Hut R5, H9, Sup T1, U937, THP-1, K562, HL60, and KG1a cells (Table 1). ..

    Gene Expression:

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. The microarray data obtained in the present study are available in the following database. (1) Human exon microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193574) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193574 ; (2) Human gene expression microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193576) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193576 . ..

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEMControl), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Data Availability Statement: The microarray data obtained in the present study are available in the following database. (1) Human exon microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193574) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193574; (2) Human gene expression microarray analysis in CEM cells overexpressing HTLV-1 Rex GEO (GSE193576) https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193576. ..

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEM-Control), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Article Title: Single-cell analysis identifies conserved features of immune dysfunction in simulated microgravity and spaceflight
    Article Snippet: .. Gene expression data from the NASA Twins study was provided by Cem Meydan in the Mason Lab in csv format and organized by Dr. Afshin Beheshti as normalized mean counts for four immune cell types. ..

    other:

    Article Title: Cancer cell metabolic plasticity allows resistance to NAMPT inhibition but invariably induces dependence on LDHA.
    Article Snippet: List of gene expression from genome wide analysis in CCRF-CEM cells. (XLSX 44303 kb) Additional file 4: Figure S2.

    Expressing:

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEMControl), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEM-Control), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Functional Assay:

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEMControl), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.

    Article Title: Exploring New Functional Aspects of HTLV-1 RNA-Binding Protein Rex: How Does Rex Control Viral Replication?
    Article Snippet: .. Briefly, the whole dataset of gene expression microarray analysis, i.e., data of all probes with expression levels (CEM-Rex against CEM-Control), were input to “Protein with Value/Ranks” application of STRING (v11.5) to perform the Functional Enrichment Analysis (FEA, hereafter). .. The results were returned as lists of terms in various databases such as Gene Ontology, KEGG, Pathways, Reactome, COMPARTMENTS, UniProt, Pfam, and InterPro, which are significantly enriched with our gene expression data.



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    Image Search Results


    Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).

    Journal: Biomolecules and Biomedicine

    Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

    doi: 10.17305/bb.2025.13221

    Figure Lengend Snippet: Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).

    Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

    Techniques:

    Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.

    Journal: Biomolecules and Biomedicine

    Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

    doi: 10.17305/bb.2025.13221

    Figure Lengend Snippet: Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.

    Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

    Techniques:

    Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.

    Journal: Biomolecules and Biomedicine

    Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation

    doi: 10.17305/bb.2025.13221

    Figure Lengend Snippet: Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.

    Article Snippet: The gene expression microarray dataset GSE83448 was obtained from the National Center for Biotechnology Information Gene Expression Omnibus (NCBI GEO; https://www.ncbi.nlm.nih.gov/geo/ ) [ ].

    Techniques: Functional Assay

    Journal: bioRxiv

    Article Title: Integrative Multi-Omic Profiling of the Human Phosphatome Identifies DUSP15 as a Tumour-Selective Regulator of Immune-Metabolic Reprogramming in Chromophobe Renal Cell Carcinoma

    doi: 10.1101/2025.11.15.688610

    Figure Lengend Snippet:

    Article Snippet: Gene Expression Omnibus (GEO) microarray datasets used for independent validation were obtained from the National Center for Biotechnology Information (NCBI) GEO repository ( https://www.ncbi.nlm.nih.gov/geo/ ) under accession numbers GSE2748, GSE11024, GSE11151, GSE12090, GSE16441, GSE17895, GSE19982, GSE36895, GSE46699, and GSE53757.

    Techniques: Expressing, Microarray