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codelink expression analysis software  (Microarrays Inc)

 
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    Structured Review

    Microarrays Inc codelink expression analysis software
    Codelink Expression Analysis Software, supplied by Microarrays Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/microarray+analysis+software+cambridge/codelink+expression+analysis+software/pm21088695-96-0-5
    Average 90 stars, based on 1 article reviews
    codelink expression analysis software - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Expressing:

    Article Title: Molecular and anatomical signatures of sleep deprivation in the mouse brain.
    Article Snippet: Arrays were hybridized (37°C for 18 h) in a shaking incubator, washed in 0.75X Tris-buffered saline (pH 7.6) at 46°C for 1 h, and stained with Cy5-Streptavidin dye conjugate for 30 min. Rinsed and dried arrays were scanned with a GenePixTM 4000B scanner [Molecular Devices, (formerly Axon Instruments), Sunnyvale, CA] at 5 μm resolution. .. Codelink Expression Analysis software (Applied Microarrays, Inc, Tempe, AZ, USA) was used for gridding and feature intensity extraction from the scanned array images. mIcroarray anaLysIs The preprocessing of the microarray data set was done using Rosetta Resolver (Rosetta Biosoftware, Seattle, WA, USA) where its error model (Weng et al., 2006) is applied as part of the Amersham/ CodeLink-Intensity Experiment Builder pipeline. .. The preprocessed intensity data were exported to R (www.r-project.org) to undo batch bias by COMBAT normalization (Johnson et al., 2007) and to do the following analyses using Bioconductor library functions (Gentleman et al., 2004).

    Software:

    Article Title: Molecular and anatomical signatures of sleep deprivation in the mouse brain.
    Article Snippet: Arrays were hybridized (37°C for 18 h) in a shaking incubator, washed in 0.75X Tris-buffered saline (pH 7.6) at 46°C for 1 h, and stained with Cy5-Streptavidin dye conjugate for 30 min. Rinsed and dried arrays were scanned with a GenePixTM 4000B scanner [Molecular Devices, (formerly Axon Instruments), Sunnyvale, CA] at 5 μm resolution. .. Codelink Expression Analysis software (Applied Microarrays, Inc, Tempe, AZ, USA) was used for gridding and feature intensity extraction from the scanned array images. mIcroarray anaLysIs The preprocessing of the microarray data set was done using Rosetta Resolver (Rosetta Biosoftware, Seattle, WA, USA) where its error model (Weng et al., 2006) is applied as part of the Amersham/ CodeLink-Intensity Experiment Builder pipeline. .. The preprocessed intensity data were exported to R (www.r-project.org) to undo batch bias by COMBAT normalization (Johnson et al., 2007) and to do the following analyses using Bioconductor library functions (Gentleman et al., 2004).

    Extraction:

    Article Title: Molecular and anatomical signatures of sleep deprivation in the mouse brain.
    Article Snippet: Arrays were hybridized (37°C for 18 h) in a shaking incubator, washed in 0.75X Tris-buffered saline (pH 7.6) at 46°C for 1 h, and stained with Cy5-Streptavidin dye conjugate for 30 min. Rinsed and dried arrays were scanned with a GenePixTM 4000B scanner [Molecular Devices, (formerly Axon Instruments), Sunnyvale, CA] at 5 μm resolution. .. Codelink Expression Analysis software (Applied Microarrays, Inc, Tempe, AZ, USA) was used for gridding and feature intensity extraction from the scanned array images. mIcroarray anaLysIs The preprocessing of the microarray data set was done using Rosetta Resolver (Rosetta Biosoftware, Seattle, WA, USA) where its error model (Weng et al., 2006) is applied as part of the Amersham/ CodeLink-Intensity Experiment Builder pipeline. .. The preprocessed intensity data were exported to R (www.r-project.org) to undo batch bias by COMBAT normalization (Johnson et al., 2007) and to do the following analyses using Bioconductor library functions (Gentleman et al., 2004).

    Microarray:

    Article Title: Molecular and anatomical signatures of sleep deprivation in the mouse brain.
    Article Snippet: Arrays were hybridized (37°C for 18 h) in a shaking incubator, washed in 0.75X Tris-buffered saline (pH 7.6) at 46°C for 1 h, and stained with Cy5-Streptavidin dye conjugate for 30 min. Rinsed and dried arrays were scanned with a GenePixTM 4000B scanner [Molecular Devices, (formerly Axon Instruments), Sunnyvale, CA] at 5 μm resolution. .. Codelink Expression Analysis software (Applied Microarrays, Inc, Tempe, AZ, USA) was used for gridding and feature intensity extraction from the scanned array images. mIcroarray anaLysIs The preprocessing of the microarray data set was done using Rosetta Resolver (Rosetta Biosoftware, Seattle, WA, USA) where its error model (Weng et al., 2006) is applied as part of the Amersham/ CodeLink-Intensity Experiment Builder pipeline. .. The preprocessed intensity data were exported to R (www.r-project.org) to undo batch bias by COMBAT normalization (Johnson et al., 2007) and to do the following analyses using Bioconductor library functions (Gentleman et al., 2004).



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