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mega6 software  (Biodesign International Inc)

 
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    Biodesign International Inc mega6 software
    Mega6 Software, supplied by Biodesign International Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/mega6+program/0+11+mega/pmc12477797-91-7-11
    Average 86 stars, based on 1 article reviews
    mega6 software - by Bioz Stars, 2026-09
    86/100 stars

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    Related Articles

    Sequencing:

    Article Title: Superior RdRp Function Drives the Dominance of Prevalent GI.3 Norovirus Lineages.
    Article Snippet: .. Multiple sequence alignments of the VP1 and RdRp datasets were performed using MEGA 11.0 (Biodesign Institute, Arizona State University, Tempe, AZ, USA) [21]. ..

    Article Title: Superior RdRp Function Drives the Dominance of Prevalent GI.3 Norovirus Lineages
    Article Snippet: .. Multiple sequence alignments of the VP1 and RdRp datasets were performed using MEGA 11.0 (Biodesign Institute, Arizona State University, Tempe, AZ, USA) [ ]. ..

    Article Title: Genomic and functional insights into aromatic compound degradation by Delftia strain PS-11 isolated from freshwater pufferfish
    Article Snippet: .. The 16S rRNA gene sequence-based phylogenetic tree was constructed according to the Kimura two-parameter model ( ) using the MEGA version 11 ( ) software package (Biodesign Institute, Arizona, USA). ..

    Article Title: Genomic and functional insights into aromatic compound degradation by Delftia strain PS-11 isolated from freshwater pufferfish.
    Article Snippet: .. The 16S rRNA gene sequence-based phylogenetic tree was constructed according to the Kimura two-parameter model (66) using the MEGA version 11 (67) software package (Biodesign Institute, Arizona, USA). ..

    Article Title: Molecular typing and phylogenetic analysis of Pasteurella multocida isolates from cattle and buffaloes of West Azerbaijan, Iran
    Article Snippet: .. It was constructed from concatenated sequences of sequence types available in the P. multocida MLST database ( http://pubmlst.org/pmultocida/ ) using the neighbor-joining method in MEGA v11.0 (Biodesign Institute, Tempe, USA). ..

    Functional Assay:

    Article Title: Biosorption potential and plant growth promoting activities of zinc tolerant novel Chitinophaga niastensis HMR31 from zinc-infested zone.
    Article Snippet: .. Tree topologies were evaluated by bootstrap analysis of 1000 data sets using MEGA 11.0 [23] (Centre for Evolutionary Functional Genomics, The Biodesign Institute, Arizona State University, Phoenix, AZ, USA). ..

    Article Title: Biosorption potential and plant growth promoting activities of zinc tolerant novel Chitinophaga niastensis HMR31 from zinc-infested zone
    Article Snippet: .. Tree topologies were evaluated by bootstrap analysis of 1000 data sets using MEGA 11.0 (Centre for Evolutionary Functional Genomics, The Biodesign Institute, Arizona State University, Phoenix, AZ, USA). ..

    Construct:

    Article Title: Genomic and functional insights into aromatic compound degradation by Delftia strain PS-11 isolated from freshwater pufferfish
    Article Snippet: .. The 16S rRNA gene sequence-based phylogenetic tree was constructed according to the Kimura two-parameter model ( ) using the MEGA version 11 ( ) software package (Biodesign Institute, Arizona, USA). ..

    Article Title: Genomic and functional insights into aromatic compound degradation by Delftia strain PS-11 isolated from freshwater pufferfish.
    Article Snippet: .. The 16S rRNA gene sequence-based phylogenetic tree was constructed according to the Kimura two-parameter model (66) using the MEGA version 11 (67) software package (Biodesign Institute, Arizona, USA). ..

    Article Title: Molecular typing and phylogenetic analysis of Pasteurella multocida isolates from cattle and buffaloes of West Azerbaijan, Iran
    Article Snippet: .. It was constructed from concatenated sequences of sequence types available in the P. multocida MLST database ( http://pubmlst.org/pmultocida/ ) using the neighbor-joining method in MEGA v11.0 (Biodesign Institute, Tempe, USA). ..

    Software:

    Article Title: Genomic and functional insights into aromatic compound degradation by Delftia strain PS-11 isolated from freshwater pufferfish
    Article Snippet: .. The 16S rRNA gene sequence-based phylogenetic tree was constructed according to the Kimura two-parameter model ( ) using the MEGA version 11 ( ) software package (Biodesign Institute, Arizona, USA). ..

    Article Title: Genomic and functional insights into aromatic compound degradation by Delftia strain PS-11 isolated from freshwater pufferfish.
    Article Snippet: .. The 16S rRNA gene sequence-based phylogenetic tree was constructed according to the Kimura two-parameter model (66) using the MEGA version 11 (67) software package (Biodesign Institute, Arizona, USA). ..



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    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the <t>MEGA6</t> program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).
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    Image Search Results


    The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).

    Journal: Plant Physiology

    Article Title: Balance between Cytosolic and Chloroplast Translation Affects Leaf Variegation 1

    doi: 10.1104/pp.17.00673

    Figure Lengend Snippet: The EVR1 gene family in Arabidopsis. A, Phylogenetic analysis of EVR1 and EVR1L proteins from Arabidopsis, Glycine max, Oryza sativa, Zea mays, Physcomitrella patens, Chlamydomonas reinhardtii, and Saccharomyces cerevisiae. Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program (Tamura et al., 2013). B, Gene structure analysis of EVR1 and EVR1L1. Gene models were drawn as in Fig. 2A. The numbers of coding nucleotides in each exon were marked. C, An alignment of amino acid sequences of EVR1 and EVR1L1. The alignment was generated by the software ClustalW2 (Larkin et al., 2007).

    Article Snippet: Proteins sequences were obtained from the National Center for Biotechnology Information and the phylogenetic tree was constructed with the MEGA6 program ( Tamura et al., 2013 ).

    Techniques: Construct, Generated, Software