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mex compiler  (MathWorks Inc)


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    MathWorks Inc mex compiler
    Mex Compiler, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 96/100, based on 325 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab+mex+interface/MATLAB+Compiler/pmc03101326-36-25-28
    Average 96 stars, based on 325 article reviews
    mex compiler - by Bioz Stars, 2026-10
    96/100 stars

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    Related Articles

    other:

    Article Title: An Integrated Framework for Automated Image Segmentation and Personalized Wall Stress Estimation of Abdominal Aortic Aneurysms.
    Article Snippet: The script can be compiled into a standalone executable (e.g., via MATLAB Compiler) that runs with the free MATLAB Runtime, so end users do not require a MATLAB license [45].

    Article Title: Autophagy dysfunction in iPSCs-derived neurons and midbrain organoids carrying a SNCA triplication.
    Article Snippet: Neural stat compiler files were used for data analysis in MATLAB.

    Article Title: An Integrated Framework for Automated Image Segmentation and Personalized Wall Stress Estimation of Abdominal Aortic Aneurysms
    Article Snippet: The script can be compiled into a standalone executable (e.g., via MATLAB Compiler) that runs with the free MATLAB Runtime, so end users do not require a MATLAB license [ ].

    Generated:

    Article Title: WAH- i : Optimising Microphone Array Geometry for Customised Localisation Accuracy
    Article Snippet: .. To support deployment beyond a MATLAB development environment, standalone executables were generated using the MATLAB Compiler ( ). ..

    Analysis:

    Article Title: Thiolactone ring dynamics in dimeric lipids enable pH-switchable supramolecular tuning in surface-engineered quantum dots.
    Article Snippet: aSchool of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. bDepartment of Chemical Sciences, Indian Institute of Science Education and Research Berhampur, Ganjam, Odisha 760003, India cSchool of Materials Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. dDepartment of Organic Chemistry, Indian Institute of Science, Bangalore 560012, India.

    Software:

    Article Title: Thiolactone ring dynamics in dimeric lipids enable pH-switchable supramolecular tuning in surface-engineered quantum dots.
    Article Snippet: aSchool of Applied and Interdisciplinary Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. bDepartment of Chemical Sciences, Indian Institute of Science Education and Research Berhampur, Ganjam, Odisha 760003, India cSchool of Materials Sciences, Indian Association for the Cultivation of Science, Kolkata 700032, India.. dDepartment of Organic Chemistry, Indian Institute of Science, Bangalore 560012, India.



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    a – b , run times of Tiff readers and writers <t>for</t> <t>libtiff</t> <t>(MATLAB),</t> tifffile (Python), and Cpp-Tiff versus the number of frames. c – d , run times of Zarr readers and writers, comparing the MATLAB interface of Zarr, native Zarr (Python), and Cpp-Zarr across different numbers of frames. In panels a-d , all images are in unit16 format with a frame size of 512 × 1,800 (xy), and the benchmark results are the absolute run times for Fig. . e – f , run times of Tiff readers and writers for libtiff (MATLAB) and Cpp-Tiff versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. g – h , run times of Zarr readers and writers for the MATLAB interface of Zarr, and Cpp-Zarr versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. i – k , data size and read/write times versus compression level for lz4 and zstd compressors for a uint16 image stack of size 512 × 1,800 × 30,000. The benchmarks were run ten times independently on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). All 24 cores were allocated for panels a – d and i – k , and varying numbers of CPU cores were allocated for panels e – h . Data are shown as mean ± s.d. in panels a – h and j – k .
    Matlab Mex Interface, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    mex (matlab executable) interfaces  (MathWorks Inc)
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    a – b , run times of Tiff readers and writers <t>for</t> <t>libtiff</t> <t>(MATLAB),</t> tifffile (Python), and Cpp-Tiff versus the number of frames. c – d , run times of Zarr readers and writers, comparing the MATLAB interface of Zarr, native Zarr (Python), and Cpp-Zarr across different numbers of frames. In panels a-d , all images are in unit16 format with a frame size of 512 × 1,800 (xy), and the benchmark results are the absolute run times for Fig. . e – f , run times of Tiff readers and writers for libtiff (MATLAB) and Cpp-Tiff versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. g – h , run times of Zarr readers and writers for the MATLAB interface of Zarr, and Cpp-Zarr versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. i – k , data size and read/write times versus compression level for lz4 and zstd compressors for a uint16 image stack of size 512 × 1,800 × 30,000. The benchmarks were run ten times independently on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). All 24 cores were allocated for panels a – d and i – k , and varying numbers of CPU cores were allocated for panels e – h . Data are shown as mean ± s.d. in panels a – h and j – k .
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    optimised functions written in c and integrated with matlab using mex interface  (MathWorks Inc)
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    3d nonuniform fast-fourier transform cuda implementation with matlab mex interface  (MathWorks Inc)
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    a – b , run times of Tiff readers and writers <t>for</t> <t>libtiff</t> <t>(MATLAB),</t> tifffile (Python), and Cpp-Tiff versus the number of frames. c – d , run times of Zarr readers and writers, comparing the MATLAB interface of Zarr, native Zarr (Python), and Cpp-Zarr across different numbers of frames. In panels a-d , all images are in unit16 format with a frame size of 512 × 1,800 (xy), and the benchmark results are the absolute run times for Fig. . e – f , run times of Tiff readers and writers for libtiff (MATLAB) and Cpp-Tiff versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. g – h , run times of Zarr readers and writers for the MATLAB interface of Zarr, and Cpp-Zarr versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. i – k , data size and read/write times versus compression level for lz4 and zstd compressors for a uint16 image stack of size 512 × 1,800 × 30,000. The benchmarks were run ten times independently on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). All 24 cores were allocated for panels a – d and i – k , and varying numbers of CPU cores were allocated for panels e – h . Data are shown as mean ± s.d. in panels a – h and j – k .
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    Image Search Results


    a – b , run times of Tiff readers and writers for libtiff (MATLAB), tifffile (Python), and Cpp-Tiff versus the number of frames. c – d , run times of Zarr readers and writers, comparing the MATLAB interface of Zarr, native Zarr (Python), and Cpp-Zarr across different numbers of frames. In panels a-d , all images are in unit16 format with a frame size of 512 × 1,800 (xy), and the benchmark results are the absolute run times for Fig. . e – f , run times of Tiff readers and writers for libtiff (MATLAB) and Cpp-Tiff versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. g – h , run times of Zarr readers and writers for the MATLAB interface of Zarr, and Cpp-Zarr versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. i – k , data size and read/write times versus compression level for lz4 and zstd compressors for a uint16 image stack of size 512 × 1,800 × 30,000. The benchmarks were run ten times independently on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). All 24 cores were allocated for panels a – d and i – k , and varying numbers of CPU cores were allocated for panels e – h . Data are shown as mean ± s.d. in panels a – h and j – k .

    Journal: Nature Methods

    Article Title: Image processing tools for petabyte-scale light sheet microscopy data

    doi: 10.1038/s41592-024-02475-4

    Figure Lengend Snippet: a – b , run times of Tiff readers and writers for libtiff (MATLAB), tifffile (Python), and Cpp-Tiff versus the number of frames. c – d , run times of Zarr readers and writers, comparing the MATLAB interface of Zarr, native Zarr (Python), and Cpp-Zarr across different numbers of frames. In panels a-d , all images are in unit16 format with a frame size of 512 × 1,800 (xy), and the benchmark results are the absolute run times for Fig. . e – f , run times of Tiff readers and writers for libtiff (MATLAB) and Cpp-Tiff versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. g – h , run times of Zarr readers and writers for the MATLAB interface of Zarr, and Cpp-Zarr versus the number of CPU cores for a unit16 image stack of size 512 × 1,800 × 20,000. i – k , data size and read/write times versus compression level for lz4 and zstd compressors for a uint16 image stack of size 512 × 1,800 × 30,000. The benchmarks were run ten times independently on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). All 24 cores were allocated for panels a – d and i – k , and varying numbers of CPU cores were allocated for panels e – h . Data are shown as mean ± s.d. in panels a – h and j – k .

    Article Snippet: Our Tiff reader/writer leverages the capabilities of the libtiff library in C++ with the MATLAB MEX interface.

    Techniques:

    a , Performance gains of our Cpp-Tiff reader versus the conventional Tiff reader in MATLAB and tifffile reader in Python versus the number of frames in 3D stacks. b , Performance gains of Cpp-Tiff writer versus the conventional Tiff writer in MATLAB and the tifffile writer in Python versus the number of frames in 3D stacks. c , Performance gains of our Cpp-Zarr reader versus the conventional Zarr reader (MATLAB interface of Zarr) and native Zarr in Python versus the number of frames in 3D stacks. d , Performance gains of Cpp-Zarr writers versus the conventional Zarr writer (MATLAB interface of Zarr) and native Zarr in Python versus the number of frames in 3D stacks. The images have a uint16 frame size of 512 × 1,800 ( xy ) in all cases. The benchmarks were run independently ten times on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). Data are shown as the mean ± s.d.

    Journal: Nature Methods

    Article Title: Image processing tools for petabyte-scale light sheet microscopy data

    doi: 10.1038/s41592-024-02475-4

    Figure Lengend Snippet: a , Performance gains of our Cpp-Tiff reader versus the conventional Tiff reader in MATLAB and tifffile reader in Python versus the number of frames in 3D stacks. b , Performance gains of Cpp-Tiff writer versus the conventional Tiff writer in MATLAB and the tifffile writer in Python versus the number of frames in 3D stacks. c , Performance gains of our Cpp-Zarr reader versus the conventional Zarr reader (MATLAB interface of Zarr) and native Zarr in Python versus the number of frames in 3D stacks. d , Performance gains of Cpp-Zarr writers versus the conventional Zarr writer (MATLAB interface of Zarr) and native Zarr in Python versus the number of frames in 3D stacks. The images have a uint16 frame size of 512 × 1,800 ( xy ) in all cases. The benchmarks were run independently ten times on a 24-core CPU computing node (dual Intel Xeon Gold 6146 CPUs). Data are shown as the mean ± s.d.

    Article Snippet: Our Tiff reader/writer leverages the capabilities of the libtiff library in C++ with the MATLAB MEX interface.

    Techniques: