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cdna microarray containing set 17,448 sequence-verified human cdna clones  (Genomictree Inc)

 
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    Structured Review

    Genomictree Inc cdna microarray containing set 17,448 sequence-verified human cdna clones
    Cdna Microarray Containing Set 17,448 Sequence Verified Human Cdna Clones, supplied by Genomictree Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/human+cdna+microarray/cdna+microarray++containing+a+set+of+17+448+sequence+verified+human+cdna+clones/pm24626561-36-9-15
    Average 90 stars, based on 1 article reviews
    cdna microarray containing set 17,448 sequence-verified human cdna clones - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Microarray:

    Article Title: HGF mediated upregulation of lipocalin 2 regulates MMP9 through nuclear factor-κB activation.
    Article Snippet: .. The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree, Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al (14). .. Briefly, total RNA (100 μg) was reverse transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock; NEN Life Science Products, Boston, MA, USA) at 42 ̊C for 2 h. The labeled cDNA was then hybridized with the cDNA microarray at 65 ̊C for 16 h. The hybridized slides were washed, scanned with an Axon 4000B scanner, and analyzed using GenePix Pro 4.0 (both from Axon Instruments).

    Article Title: Egr-1, a new downstream molecule of Epstein-Barr virus latent membrane protein 1.
    Article Snippet: MCF7 and Jurkat cells were transiently transfected with these blished by Elsevier B.V. All rights reserved. vectors, using the Amaxa electroporation system (Amaxa, Gaithersburg, MD), which produced transfection efficiencies of >80% in both cell types, as assessed by microscopic observation. .. A cDNA microarray containing 17448 sequence-verified human cDNA clones was purchased from GenomicTree Inc. (Seoul, Korea). ..

    Article Title: The Important Role of GPX1 and NF-κB Signaling Pathway in Human Gastric Cancer: Implications for Cell Proliferation and Invasion.
    Article Snippet: .. The cDNA microarray with 17,448 sequence-verified human cDNA clones was supplied by GenomicTree, Inc. (Daejeon, Republic of Korea). ..

    Article Title: IL-1β-stimulated urokinase plasminogen activator expression through NF-κB in gastric cancer after HGF treatment.
    Article Snippet: .. The cDNA microarray containing a set of 17,448 sequence-verified human cDNA clones was provided by Genomictree, Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al (16). .. Briefly, total RNA (100 μg) was reverse-transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock; NEN Life Science Products, Boston, MA, USA) at 42 ̊C for 2 h. The labeled cDNA was then hybridized with the cDNA microarray at 65 ̊C for 16 h. The hybridized slides were washed, scanned with an Axon 4000B scanner (Axon Instruments), and analyzed using GenePix Pro 4.0 (Axon Instruments).

    Article Title: HGF-mediated S100A11 overexpression enhances proliferation and invasion of gastric cancer
    Article Snippet: .. Equal loading of the RNAs was confirmed by hybridization with a 32 P-labeled GAPDH probe. cDNA microarray analysis The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree Inc., (Daejeon, Korea). ..

    Article Title: Maspin Suppresses Survival of Lung Cancer Cells through Modulation of Akt Pathway
    Article Snippet: .. 6 cDNA microarray analysis A cDNA microarray containing 17,448 sequence-verified human cDNA clones was purchased from GenomicTree Inc. (Seoul, Korea). ..

    Article Title: Regulation of HGF-mediated cell proliferation and invasion through NF-κB, JunB, and MMP-9 cascades in stomach cancer cells.
    Article Snippet: Blocking of activator protein-1 activity leads to suppression of growth factor-induced transformation.. However, the role of individual components of the Jun family in this process is unclear.. Over-expression of JunB has been reported to be associated with neoplastic transformation and regulation of Matrix metalloproteinase-9 (MMP-9) expression.

    Sequencing:

    Article Title: HGF mediated upregulation of lipocalin 2 regulates MMP9 through nuclear factor-κB activation.
    Article Snippet: .. The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree, Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al (14). .. Briefly, total RNA (100 μg) was reverse transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock; NEN Life Science Products, Boston, MA, USA) at 42 ̊C for 2 h. The labeled cDNA was then hybridized with the cDNA microarray at 65 ̊C for 16 h. The hybridized slides were washed, scanned with an Axon 4000B scanner, and analyzed using GenePix Pro 4.0 (both from Axon Instruments).

    Article Title: Egr-1, a new downstream molecule of Epstein-Barr virus latent membrane protein 1.
    Article Snippet: MCF7 and Jurkat cells were transiently transfected with these blished by Elsevier B.V. All rights reserved. vectors, using the Amaxa electroporation system (Amaxa, Gaithersburg, MD), which produced transfection efficiencies of >80% in both cell types, as assessed by microscopic observation. .. A cDNA microarray containing 17448 sequence-verified human cDNA clones was purchased from GenomicTree Inc. (Seoul, Korea). ..

    Article Title: The Important Role of GPX1 and NF-κB Signaling Pathway in Human Gastric Cancer: Implications for Cell Proliferation and Invasion.
    Article Snippet: .. The cDNA microarray with 17,448 sequence-verified human cDNA clones was supplied by GenomicTree, Inc. (Daejeon, Republic of Korea). ..

    Article Title: IL-1β-stimulated urokinase plasminogen activator expression through NF-κB in gastric cancer after HGF treatment.
    Article Snippet: .. The cDNA microarray containing a set of 17,448 sequence-verified human cDNA clones was provided by Genomictree, Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al (16). .. Briefly, total RNA (100 μg) was reverse-transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock; NEN Life Science Products, Boston, MA, USA) at 42 ̊C for 2 h. The labeled cDNA was then hybridized with the cDNA microarray at 65 ̊C for 16 h. The hybridized slides were washed, scanned with an Axon 4000B scanner (Axon Instruments), and analyzed using GenePix Pro 4.0 (Axon Instruments).

    Article Title: HGF-mediated S100A11 overexpression enhances proliferation and invasion of gastric cancer
    Article Snippet: .. Equal loading of the RNAs was confirmed by hybridization with a 32 P-labeled GAPDH probe. cDNA microarray analysis The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree Inc., (Daejeon, Korea). ..

    Article Title: Maspin Suppresses Survival of Lung Cancer Cells through Modulation of Akt Pathway
    Article Snippet: .. 6 cDNA microarray analysis A cDNA microarray containing 17,448 sequence-verified human cDNA clones was purchased from GenomicTree Inc. (Seoul, Korea). ..

    Article Title: Regulation of HGF-mediated cell proliferation and invasion through NF-κB, JunB, and MMP-9 cascades in stomach cancer cells.
    Article Snippet: Blocking of activator protein-1 activity leads to suppression of growth factor-induced transformation.. However, the role of individual components of the Jun family in this process is unclear.. Over-expression of JunB has been reported to be associated with neoplastic transformation and regulation of Matrix metalloproteinase-9 (MMP-9) expression.

    Clone Assay:

    Article Title: HGF mediated upregulation of lipocalin 2 regulates MMP9 through nuclear factor-κB activation.
    Article Snippet: .. The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree, Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al (14). .. Briefly, total RNA (100 μg) was reverse transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock; NEN Life Science Products, Boston, MA, USA) at 42 ̊C for 2 h. The labeled cDNA was then hybridized with the cDNA microarray at 65 ̊C for 16 h. The hybridized slides were washed, scanned with an Axon 4000B scanner, and analyzed using GenePix Pro 4.0 (both from Axon Instruments).

    Article Title: Egr-1, a new downstream molecule of Epstein-Barr virus latent membrane protein 1.
    Article Snippet: MCF7 and Jurkat cells were transiently transfected with these blished by Elsevier B.V. All rights reserved. vectors, using the Amaxa electroporation system (Amaxa, Gaithersburg, MD), which produced transfection efficiencies of >80% in both cell types, as assessed by microscopic observation. .. A cDNA microarray containing 17448 sequence-verified human cDNA clones was purchased from GenomicTree Inc. (Seoul, Korea). ..

    Article Title: The Important Role of GPX1 and NF-κB Signaling Pathway in Human Gastric Cancer: Implications for Cell Proliferation and Invasion.
    Article Snippet: .. The cDNA microarray with 17,448 sequence-verified human cDNA clones was supplied by GenomicTree, Inc. (Daejeon, Republic of Korea). ..

    Article Title: IL-1β-stimulated urokinase plasminogen activator expression through NF-κB in gastric cancer after HGF treatment.
    Article Snippet: .. The cDNA microarray containing a set of 17,448 sequence-verified human cDNA clones was provided by Genomictree, Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al (16). .. Briefly, total RNA (100 μg) was reverse-transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock; NEN Life Science Products, Boston, MA, USA) at 42 ̊C for 2 h. The labeled cDNA was then hybridized with the cDNA microarray at 65 ̊C for 16 h. The hybridized slides were washed, scanned with an Axon 4000B scanner (Axon Instruments), and analyzed using GenePix Pro 4.0 (Axon Instruments).

    Article Title: HGF-mediated S100A11 overexpression enhances proliferation and invasion of gastric cancer
    Article Snippet: .. Equal loading of the RNAs was confirmed by hybridization with a 32 P-labeled GAPDH probe. cDNA microarray analysis The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree Inc., (Daejeon, Korea). ..

    Article Title: Maspin Suppresses Survival of Lung Cancer Cells through Modulation of Akt Pathway
    Article Snippet: .. 6 cDNA microarray analysis A cDNA microarray containing 17,448 sequence-verified human cDNA clones was purchased from GenomicTree Inc. (Seoul, Korea). ..

    Article Title: Regulation of HGF-mediated cell proliferation and invasion through NF-κB, JunB, and MMP-9 cascades in stomach cancer cells.
    Article Snippet: Blocking of activator protein-1 activity leads to suppression of growth factor-induced transformation.. However, the role of individual components of the Jun family in this process is unclear.. Over-expression of JunB has been reported to be associated with neoplastic transformation and regulation of Matrix metalloproteinase-9 (MMP-9) expression.

    Hybridization:

    Article Title: HGF-mediated S100A11 overexpression enhances proliferation and invasion of gastric cancer
    Article Snippet: .. Equal loading of the RNAs was confirmed by hybridization with a 32 P-labeled GAPDH probe. cDNA microarray analysis The cDNA microarray, containing a set of 17,448 sequence-verified human cDNA clones, was provided by GenomicTree Inc., (Daejeon, Korea). ..

    Article Title: Regulation of HGF-mediated cell proliferation and invasion through NF-κB, JunB, and MMP-9 cascades in stomach cancer cells.
    Article Snippet: Blocking of activator protein-1 activity leads to suppression of growth factor-induced transformation.. However, the role of individual components of the Jun family in this process is unclear.. Over-expression of JunB has been reported to be associated with neoplastic transformation and regulation of Matrix metalloproteinase-9 (MMP-9) expression.

    Polymerase Chain Reaction:

    Article Title: BAG3 contributes to HGF-mediated cell proliferation, migration, and invasion via the Egr1 pathway in gastric cancer.
    Article Snippet: .. PCR products were separated on 1.5% agarose gels containing ethidium bromide and visualized with a UV transilluminator. cDNA Microarray analysis The cDNA microarray, which contained 17,448 sequenceverified human cDNA clones, was provided by GenomicTree Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al.35 Briefly, total RNA (100 μg) was reverse transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock, NEN Life Science Products, Boston, MA) at 42°C for 2 hours. ..

    Reverse Transcription:

    Article Title: BAG3 contributes to HGF-mediated cell proliferation, migration, and invasion via the Egr1 pathway in gastric cancer.
    Article Snippet: .. PCR products were separated on 1.5% agarose gels containing ethidium bromide and visualized with a UV transilluminator. cDNA Microarray analysis The cDNA microarray, which contained 17,448 sequenceverified human cDNA clones, was provided by GenomicTree Inc. (Daejeon, Korea). cDNA microarray experiments were performed as described by Yang et al.35 Briefly, total RNA (100 μg) was reverse transcribed in the presence of Cy3-dUTP or Cy5-dUTP (25 mM stock, NEN Life Science Products, Boston, MA) at 42°C for 2 hours. ..



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    Image Search Results


    Top ten upregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA  microarray  dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

    Journal: Non-Coding RNA

    Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

    doi: 10.3390/ncrna10020025

    Figure Lengend Snippet: Top ten upregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA microarray dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

    Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

    Techniques: Microarray, Software

    Top ten downregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA  microarray  dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

    Journal: Non-Coding RNA

    Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

    doi: 10.3390/ncrna10020025

    Figure Lengend Snippet: Top ten downregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA microarray dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

    Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

    Techniques: Microarray, Software

    Difference in lncRNA and mRNA fold-changes between the cDNA microarray and in-house RT-qPCR experiments. Data shown are from three independent experiments (in triplicates) with calculated SD values to represent error bars and their statistical analyses were conducted using one-way ANOVA.

    Journal: Non-Coding RNA

    Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

    doi: 10.3390/ncrna10020025

    Figure Lengend Snippet: Difference in lncRNA and mRNA fold-changes between the cDNA microarray and in-house RT-qPCR experiments. Data shown are from three independent experiments (in triplicates) with calculated SD values to represent error bars and their statistical analyses were conducted using one-way ANOVA.

    Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

    Techniques: Microarray, Quantitative RT-PCR

    ( A ) LncRNA-mRNA interaction network was constructed based on the ten selected candidate lncRNAs from the cDNA microarray dataset. The resulting mRNA interactions were predicted using the “rtool” database with −20 kcal as the minimum energy threshold and were filtered to show only mRNAs that were also dysregulated in the dataset. Data were visualized using Cytoscape v3.8.2. (Pink diamond = candidate lncRNA, blue circle = predicted putative mRNA targets). ( B ) A total of nine mRNAs were identified as both responsible in the “regulated exocytosis” hit as well as highly likely to be regulated by the candidate lncRNAs listed in ( A ). Data were visualized using Cytoscape v3.8.2. (pink diamond = candidate regulator lncRNA, blue circle = mRNA predicted involved in the biological process).

    Journal: Non-Coding RNA

    Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

    doi: 10.3390/ncrna10020025

    Figure Lengend Snippet: ( A ) LncRNA-mRNA interaction network was constructed based on the ten selected candidate lncRNAs from the cDNA microarray dataset. The resulting mRNA interactions were predicted using the “rtool” database with −20 kcal as the minimum energy threshold and were filtered to show only mRNAs that were also dysregulated in the dataset. Data were visualized using Cytoscape v3.8.2. (Pink diamond = candidate lncRNA, blue circle = predicted putative mRNA targets). ( B ) A total of nine mRNAs were identified as both responsible in the “regulated exocytosis” hit as well as highly likely to be regulated by the candidate lncRNAs listed in ( A ). Data were visualized using Cytoscape v3.8.2. (pink diamond = candidate regulator lncRNA, blue circle = mRNA predicted involved in the biological process).

    Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

    Techniques: Construct, Microarray

    Comparisons of real-time quantitative reverse transcription PCR,  microarrays,  and RNA-sequencing and their applications in hepatocellular carcinoma recurrence

    Journal: World Journal of Gastroenterology

    Article Title: Transcriptome analysis creates a new era of precision medicine for managing recurrent hepatocellular carcinoma

    doi: 10.3748/wjg.v29.i5.780

    Figure Lengend Snippet: Comparisons of real-time quantitative reverse transcription PCR, microarrays, and RNA-sequencing and their applications in hepatocellular carcinoma recurrence

    Article Snippet: The surfacing of commercial platforms, such as Human UniGene Set RZPD 1 clone set for cDNA microarrays and Affymetrix Human Genome U95Av2 array for oligonucleotide arrays, have made the technology for both types of arrays widely accessible[ ].

    Techniques: Isolation, cDNA Library Assay, Amplification, Labeling, Fluorescence, Hybridization, Sequencing, High Throughput Screening Assay