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Genomictree Inc 22k human genome array
22k Human Genome Array, supplied by Genomictree Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/human+cdna+microarray/17k+human+cdna+microarray/pm22020741-54-4-8
Average 90 stars, based on 1 article reviews
22k human genome array - by Bioz Stars, 2026-10
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Related Articles

Gene Expression:

Article Title: Identification of GABRA1 and LAMA2 as new DNA methylation markers in colorectal cancer.
Article Snippet: .. Human 17K cDNA microarrays (Genomictree, Daejeon, Republic of Korea) containing 17,075 samples of human cDNA, which represents 15,724 different genes (Research Genetics, Huntsville, AL, USA), were manufactured as previously described (23) and used in gene expression analysis. ..

Article Title: AGR2, a mucinous ovarian cancer marker, promotes cell proliferation and migration
Article Snippet: RNA isolation, cDNA microarray analysis, and RT-PCR Total cellular RNA was extracted from ovarian tumor and matched normal tissues obtained from 32 patients using TRIZOL reagent (Invitrogen Life Technologies), according to the manufacturer's protocol. .. Human 17K cDNA microarrays (Genomictree, Daejeon, Korea) containing 17,075 human cDNAs representing 15,724 different genes (Uni-Gene clusters) were used in gene expression analysis, as previously described ( Yang et al., 2003 ). .. Briefly, each 50 μg of total RNA was mixed with 2 μg of oligo-(dT) 24 (GenoTech, Daejeon, Korea) and incubated at 65°C for 10 min. Single-stranded cDNA was synthesized in the presence of Cy3-dUTP or Cy5-dUTP (1 mM each, NEN Life Science Products, Boston, MA) at 42°C for 2 h. Total RNAs from ovarian tumors and normal ovary tissues were labeled with Cy5 and Cy3, respectively.

Article Title: Asthma-Predictive Genetic Markers in Gene Expression Profiling of Peripheral Blood Mononuclear Cells
Article Snippet: .. A human oligonucleotide microarrays (Genomictree Inc., Daejeon, Korea) containing 34,560 oligonucleotide probes, representing human genes and gene transcripts, were used for gene expression analysis. .. The 34,560 oligoncleotide probes were purchased from (Qiagen, Germantown, MD, USA).

Microarray:

Article Title: Adenosine stimulates growth of dermal papilla and lengthens the anagen phase by increasing the cysteine level via fibroblast growth factors 2 and 7 in an organ culture of mouse vibrissae hair follicles.
Article Snippet: Total-RNA was extracted from cells using a TRIzol reagent kit (Invitrogen Life Technologies, Carlsbad, CA, USA) according to the manufacturer's instructions. .. For microarray analysis, a 22K Human Genome Array (Genomictree Inc., Daejeon, Korea) was used. .. Total-RNA (100 μg) was reverse-transcribed in the presence of Cy3 and/or Cy5 monoreactive dye (Amersham Pharmacia Biotech) using a Superscript cDNA synthesis system (Gibco-BRL).

Article Title: Identification of GABRA1 and LAMA2 as new DNA methylation markers in colorectal cancer.
Article Snippet: .. We thank Mr. C. Yoon, vice president of Genomictree, Inc. for manufacturing 17K cDNA microarray and Benjamin Hoehn, Biolingual, Inc. for editing and proofreading the manuscript. ..

Article Title: Differential gene expression profiles of radioresistant non-small-cell lung cancer cell lines established by fractionated irradiation: tumor protein p53-inducible protein 3 confers sensitivity to ionizing radiation.
Article Snippet: Reprin Dermatol 55 Munhw 7707; Fax Suppor the Korea PG6-01G Internatio Purpose: Despite the widespread use of radiotherapy as a local and regional modality for the treatment of cancer, some non–small-cell lung cancers commonly develop resistance to radiation.. We thus sought to clarify the molecular mechanisms underlying resistance to radiation.. Methods and Materials: We established the radioresistant cell line H460R from radiosensitive parental H460 cells.

Article Title: Sox9 Increases the Proliferation and Colony-forming Activity of Outer Root Sheath Cells Cultured In Vitro
Article Snippet: .. Microarray analysis To identify β-catenin-regulated genes, we transduced ORS cells with adenovirus expressing N-terminal 87-amino acid truncated β-catenin (ΔN87βCat) and performed cDNA microarray using 27 K human cDNA microarray slides (GenomicTree, Daejeon, Korea) 5 . .. Microarray slides were analyzed using GenePix Pro 4.0 software (Axon Instruments, Union City, CA, USA) and GeneSpring 7.2 software (Agilent Technologies, Redwood City, CA, USA).

Article Title: Sox9 Increases the Proliferation and Colony-forming Activity of Outer Root Sheath Cells Cultured In Vitro
Article Snippet: .. To identify β-catenin-regulated genes, we transduced ORS cells with adenovirus expressing N-terminal 87-amino acid truncated β-catenin (ΔN87βCat) and performed cDNA microarray using 27 K human cDNA microarray slides (GenomicTree, Daejeon, Korea) 5 . .. Microarray slides were analyzed using GenePix Pro 4.0 software (Axon Instruments, Union City, CA, USA) and GeneSpring 7.2 software (Agilent Technologies, Redwood City, CA, USA).

Expressing:

Article Title: Sox9 Increases the Proliferation and Colony-forming Activity of Outer Root Sheath Cells Cultured In Vitro
Article Snippet: .. Microarray analysis To identify β-catenin-regulated genes, we transduced ORS cells with adenovirus expressing N-terminal 87-amino acid truncated β-catenin (ΔN87βCat) and performed cDNA microarray using 27 K human cDNA microarray slides (GenomicTree, Daejeon, Korea) 5 . .. Microarray slides were analyzed using GenePix Pro 4.0 software (Axon Instruments, Union City, CA, USA) and GeneSpring 7.2 software (Agilent Technologies, Redwood City, CA, USA).

Article Title: Sox9 Increases the Proliferation and Colony-forming Activity of Outer Root Sheath Cells Cultured In Vitro
Article Snippet: .. To identify β-catenin-regulated genes, we transduced ORS cells with adenovirus expressing N-terminal 87-amino acid truncated β-catenin (ΔN87βCat) and performed cDNA microarray using 27 K human cDNA microarray slides (GenomicTree, Daejeon, Korea) 5 . .. Microarray slides were analyzed using GenePix Pro 4.0 software (Axon Instruments, Union City, CA, USA) and GeneSpring 7.2 software (Agilent Technologies, Redwood City, CA, USA).



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Top ten upregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA <t> microarray </t> dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.
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Image Search Results


Top ten upregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA  microarray  dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

Journal: Non-Coding RNA

Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

doi: 10.3390/ncrna10020025

Figure Lengend Snippet: Top ten upregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA microarray dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

Techniques: Microarray, Software

Top ten downregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA  microarray  dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

Journal: Non-Coding RNA

Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

doi: 10.3390/ncrna10020025

Figure Lengend Snippet: Top ten downregulated lncRNAs and mRNAs and their respective fold-changes and p -values based on the cDNA microarray dataset. The transcripts were statistically analyzed in the Agilent GeneSpring GX (v14.9.1) software using moderated t -test and Benjamin–Hochberg multiple testing corrections and had satisfied the p -value of <0.05 and fold-change cutoff of ±2.00. Data shown are from four independent experiments.

Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

Techniques: Microarray, Software

Difference in lncRNA and mRNA fold-changes between the cDNA microarray and in-house RT-qPCR experiments. Data shown are from three independent experiments (in triplicates) with calculated SD values to represent error bars and their statistical analyses were conducted using one-way ANOVA.

Journal: Non-Coding RNA

Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

doi: 10.3390/ncrna10020025

Figure Lengend Snippet: Difference in lncRNA and mRNA fold-changes between the cDNA microarray and in-house RT-qPCR experiments. Data shown are from three independent experiments (in triplicates) with calculated SD values to represent error bars and their statistical analyses were conducted using one-way ANOVA.

Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

Techniques: Microarray, Quantitative RT-PCR

( A ) LncRNA-mRNA interaction network was constructed based on the ten selected candidate lncRNAs from the cDNA microarray dataset. The resulting mRNA interactions were predicted using the “rtool” database with −20 kcal as the minimum energy threshold and were filtered to show only mRNAs that were also dysregulated in the dataset. Data were visualized using Cytoscape v3.8.2. (Pink diamond = candidate lncRNA, blue circle = predicted putative mRNA targets). ( B ) A total of nine mRNAs were identified as both responsible in the “regulated exocytosis” hit as well as highly likely to be regulated by the candidate lncRNAs listed in ( A ). Data were visualized using Cytoscape v3.8.2. (pink diamond = candidate regulator lncRNA, blue circle = mRNA predicted involved in the biological process).

Journal: Non-Coding RNA

Article Title: Possible Involvement of Long Non-Coding RNAs GNAS-AS1 and MIR205HG in the Modulation of 5-Fluorouracil Chemosensitivity in Colon Cancer Cells through Increased Extracellular Release of Exosomes

doi: 10.3390/ncrna10020025

Figure Lengend Snippet: ( A ) LncRNA-mRNA interaction network was constructed based on the ten selected candidate lncRNAs from the cDNA microarray dataset. The resulting mRNA interactions were predicted using the “rtool” database with −20 kcal as the minimum energy threshold and were filtered to show only mRNAs that were also dysregulated in the dataset. Data were visualized using Cytoscape v3.8.2. (Pink diamond = candidate lncRNA, blue circle = predicted putative mRNA targets). ( B ) A total of nine mRNAs were identified as both responsible in the “regulated exocytosis” hit as well as highly likely to be regulated by the candidate lncRNAs listed in ( A ). Data were visualized using Cytoscape v3.8.2. (pink diamond = candidate regulator lncRNA, blue circle = mRNA predicted involved in the biological process).

Article Snippet: In this study, purified total RNAs of both the SW480/DR and SW480/DS cells were analyzed using Agilent SurePrint G3 Human Gene Expression v3 8x60k format cDNA microarray and processed in the Agilent GeneSpring GX v14.9.1 software.

Techniques: Construct, Microarray

Comparisons of real-time quantitative reverse transcription PCR,  microarrays,  and RNA-sequencing and their applications in hepatocellular carcinoma recurrence

Journal: World Journal of Gastroenterology

Article Title: Transcriptome analysis creates a new era of precision medicine for managing recurrent hepatocellular carcinoma

doi: 10.3748/wjg.v29.i5.780

Figure Lengend Snippet: Comparisons of real-time quantitative reverse transcription PCR, microarrays, and RNA-sequencing and their applications in hepatocellular carcinoma recurrence

Article Snippet: The surfacing of commercial platforms, such as Human UniGene Set RZPD 1 clone set for cDNA microarrays and Affymetrix Human Genome U95Av2 array for oligonucleotide arrays, have made the technology for both types of arrays widely accessible[ ].

Techniques: Isolation, cDNA Library Assay, Amplification, Labeling, Fluorescence, Hybridization, Sequencing, High Throughput Screening Assay