gene expression microarray dataset gse83448 (Biotechnology Information)
86
Structured Review
Biotechnology Information
gene expression microarray dataset gse83448
Gene Expression Microarray Dataset Gse83448, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gene+expression+microarray/expression+gene+omnibus+%E2%80%A2/pmc12873759-27-1-13
Average 86 stars, based on 1 article reviews
Gene Expression Microarray Dataset Gse83448, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gene+expression+microarray/expression+gene+omnibus+%E2%80%A2/pmc12873759-27-1-13
Average 86 stars, based on 1 article reviews
gene expression microarray dataset gse83448 - by Bioz Stars,
2026-11
86/100 stars
Images
1) Product Images from "S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation"
Article Title: S-palmitoylation-related genes in Crohn’s disease: Bioinformatic identification and validation
Journal: Biomolecules and Biomedicine
doi: 10.17305/bb.2025.13221
Figure Legend Snippet: Flowchart of the study design. Genomic and transcriptomic data were extracted from the GEO database ( GSE83448 ).
Techniques Used:
Figure Legend Snippet: Differentially expressed S-palmitoylation-related genes in 39 CD intestinal biopsies and 14 healthy controls. (A) PCA for GSE83448 . (B) Volcano plot illustrating 3743 DEGs. (C) Venn diagram depicting the overlap between DEGs and S-palmitoylation-related genes. (D) Heatmap representing the 23 SP-DEGs in CD and healthy controls. (E) Boxplots comparing the 23 SP-DEGs in CD and healthy controls. Abbreviations: CD: Crohn’s disease; PCA: Principal component analysis; DEGs: Differentially expressed genes; SP-DEGs: S-palmitoylation-related differentially expressed genes.
Techniques Used:
Figure Legend Snippet: Functional enrichment analysis of SP-DEGs in the GSE83448 dataset. (A) The bubble plot illustrates key enriched terms across various categories. BP denotes biological processes; CC indicates cellular components; and MF represents molecular functions. (B) The circle map emphasizes BPs associated with S-palmitoylation. (C) The bar plot presents the results of the functional enrichment analysis, ranked by statistical significance. (D) The Circos plot visualizes the functional associations across categories. Abbreviations: SP-DEGs: S-palmitoylation-related differentially expressed genes; BP: Biological process; CC: Cellular component; MF: Molecular function.
Techniques Used: Functional Assay
Related Articles
Gene Expression:Article Title: Synovial transcriptomic biomarkers predict structural severity in equine osteochondral fragment-induced experimental osteoarthritis. Article Snippet: .. The names of the repository and accession number can be found at the National Center for Biotechnology Information Article Title: Single-cell RNA sequencing profiles drug activity within spatially engineered 3D cultures. Article Snippet: .. The scRNA-seq datasets generated in this study have been deposited in the National Centre for Biotechnology Information ( Article Title: Cepharanthine suppresses lung adenocarcinoma through targeting glutathione peroxidase 4 Article Snippet: .. Microarray datasets pertinent to LUAD were sourced from the Article Title: APE1 inhibition-promoted pyroptosis triggers T-cell infiltration and enhances anti-tumor immunity in NSCLC Article Snippet: .. RNA sequencing data that support the findings of this study have been deposited in the National Center for Biotechnology Information (NCBI)'s Article Title: A Phase Ib Trial of Copanlisib in Combination with Venetoclax in Patients with Relapsed or Refractory B-Cell Non-Hodgkin Lymphoma-SAKK 66/18 Trial. Article Snippet: .. Expression data will be available in the National Center for Biotechnology Information Generated:Article Title: Single-cell RNA sequencing profiles drug activity within spatially engineered 3D cultures. Article Snippet: .. The scRNA-seq datasets generated in this study have been deposited in the National Centre for Biotechnology Information ( Microarray:Article Title: Cepharanthine suppresses lung adenocarcinoma through targeting glutathione peroxidase 4 Article Snippet: .. Microarray datasets pertinent to LUAD were sourced from the Article Title: Quercetin Affects Carcinogenic Phenotype of Breast and Lung Cancer Cells Differentially Through Sterol Regulation Mediated by MALAT1 Perturbation. Article Snippet: Targeting MALAT1 in cancer treatment is an attractive strategy due to the undebatable role of this lncRNA in the disease.. Small molecules toward this noncoding RNA have, in fact, entered preclinical trials, without resulting in a robust demonstration in favor of their use in therapy.. To test the robustness of this method, we asked how aspects of carcinogenesis get affected when knocking down MALAT1 in different cell lines. RNA Sequencing:Article Title: APE1 inhibition-promoted pyroptosis triggers T-cell infiltration and enhances anti-tumor immunity in NSCLC Article Snippet: .. RNA sequencing data that support the findings of this study have been deposited in the National Center for Biotechnology Information (NCBI)'s Article Title: Quercetin Affects Carcinogenic Phenotype of Breast and Lung Cancer Cells Differentially Through Sterol Regulation Mediated by MALAT1 Perturbation. Article Snippet: Targeting MALAT1 in cancer treatment is an attractive strategy due to the undebatable role of this lncRNA in the disease.. Small molecules toward this noncoding RNA have, in fact, entered preclinical trials, without resulting in a robust demonstration in favor of their use in therapy.. To test the robustness of this method, we asked how aspects of carcinogenesis get affected when knocking down MALAT1 in different cell lines. Expressing:Article Title: Quercetin Affects Carcinogenic Phenotype of Breast and Lung Cancer Cells Differentially Through Sterol Regulation Mediated by MALAT1 Perturbation. Article Snippet: Targeting MALAT1 in cancer treatment is an attractive strategy due to the undebatable role of this lncRNA in the disease.. Small molecules toward this noncoding RNA have, in fact, entered preclinical trials, without resulting in a robust demonstration in favor of their use in therapy.. To test the robustness of this method, we asked how aspects of carcinogenesis get affected when knocking down MALAT1 in different cell lines. Article Title: A Phase Ib Trial of Copanlisib in Combination with Venetoclax in Patients with Relapsed or Refractory B-Cell Non-Hodgkin Lymphoma-SAKK 66/18 Trial. Article Snippet: .. Expression data will be available in the National Center for Biotechnology Information |