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correlative atlas 5 (3d) software package  (Carl Zeiss)


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    Structured Review

    Carl Zeiss correlative atlas 5 (3d) software package
    Correlative Atlas 5 (3d) Software Package, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/efficient+navigation+microscope+software/5+atlas+software/pmc06731510-47-9-7
    Average 90 stars, based on 1 article reviews
    correlative atlas 5 (3d) software package - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Software:

    Article Title: Influence of powder type, power, angulation and duration in air-polishing on the surface properties of gingiva-colored composites.
    Article Snippet: From each sample center, 3 randomized reads were performed by scanning a 500 μm × 500 μm area in fast mode (4 μm) at a total magnification of 20x (C Epiphalan-Apochromat 20x/0.7 DIC; Carl Zeiss, Jena, Germany) in 3D imaging mode [19]. .. The images were transferred to an automated software analysis program (ConfoMap ST 7.4.8076; Carl Zeiss, Jena, Germany). ..

    Article Title: Controlling mitochondrial membrane architecture via MIC60 determines viral replication to promote anti-viral immunity.
    Article Snippet: .. The alignment and exportation of Image Stacks were carried out utilizing the Zeiss Atlas 5 software suite. .. Subsequently, these images were imported into the ThermoFisher Amira 2021 software.

    Article Title: Loss of Bmal1 impairs the glutamatergic light input to the SCN in mice
    Article Snippet: .. The Atlas 5 software (Carl Zeiss AG, Oberkochen, Germany) was used for the collection of stacks of SEM images and automated correction of focus and alignment/astigmatism of serial micrographs. .. ImageJ software 1 was used for image pinning.

    Article Title: Life cycle and morphogenetic differentiation in heteromorphic cell types of a cosmopolitan marine microalga
    Article Snippet: Samples were embedded in 100% resin, mounted on SEM stubs, gold sputter‐coated (Quorum Q150RS; 180 s at 30 mA) and imaged with a FIB‐SEM (Crossbeam 540; Zeiss AG, Oberkochen, Germany). .. The atlas3d software (Fibics Inc., Ottawa, Canada and Zeiss AG) was used for sample preparation and 3D acquisitions, with SEM images recorded at an 8 nm pixel size. ..

    Article Title: Rate-dependent inelastic deformation of Slochteren sandstone: implication for reservoir compaction in the Groningen gas field
    Article Snippet: Each section was imaged in full using a ZEISS Gemini 450 scanning electron microscope (SEM) operated in backscatter electron (BSE) mode with a resolution of 0.80 \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\upmu {\text{m}}$$\end{document} μ m (acceleration voltage: 15 kV; beam current: 1.0 nA; working distance: 10 mm). .. Automatic tile stitching was done using ZEISS Atlas 5 software. ..

    Article Title: Integrated 3D imaging of FFPE lung tissue combining microCT, light and electron microscopy allows for contextualized ultrastructural and histological analysis.
    Article Snippet: The slides were placed on a carousel and connected with copper tape (Plano GmbH, G3490) and silver conductive fluid (Plano GmbH, ACHESON 1415, G3692) to prevent charging effects. .. Navigation to specific sites of interest was performed using the Atlas 5 software (ZEISS). .. SEM acquistion was performed with a Ultra TM 55 (Zeiss) using 2 kV primary energy, 20 μm aperture, a pixel size of 40 nm and a SE detector.

    Article Title: Sample Processing and Benchmarking for Multibeam Optical Scanning Transmission Electron Microscopy.
    Article Snippet: .. Zeiss ATLAS software v5.2 was used for the large-scale acquisition. ow nloaded from https://academ ic.oup.com /m am /article/31/2/ozaf024/8104026 by guest on 07 April 2025 .. Image processing and metric calculations were done in Python v3.12.3 using Jupyter v4.2.1 (Granger & Perez, 2021).

    Article Title: Myoglobin expression improves T-cell metabolism and antitumor effector function.
    Article Snippet: .. The alignment and exportation of Image Stacks were carried out using the Zeiss Atlas 5 software suite. .. Subsequently, these images were imported into the Thermo Fisher Amira 2021 software.

    Sample Prep:

    Article Title: Life cycle and morphogenetic differentiation in heteromorphic cell types of a cosmopolitan marine microalga
    Article Snippet: Samples were embedded in 100% resin, mounted on SEM stubs, gold sputter‐coated (Quorum Q150RS; 180 s at 30 mA) and imaged with a FIB‐SEM (Crossbeam 540; Zeiss AG, Oberkochen, Germany). .. The atlas3d software (Fibics Inc., Ottawa, Canada and Zeiss AG) was used for sample preparation and 3D acquisitions, with SEM images recorded at an 8 nm pixel size. ..



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