docking program flexx sybyl7.3 (Tripos Inc)
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Docking Program Flexx Sybyl7.3, supplied by Tripos Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/docking+program+flexx/sybyl+software/pmc03463587-219-9-13
Average 90 stars, based on 1 article reviews
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other:Article Title: Virtual screening of umami peptides during sufu ripening based on machine learning and molecular docking to umami receptor T1R1/T1R3. Article Snippet: Umami peptides might significantly contribute to the taste of sufu.. However, the inefficiencies of traditional identification methods had great limitations.. This study explored a new approach for umami peptides characterization in sufu. Article Title: 3D-QSAR-Guided Molecule Design and Protein-Ligand Interaction Studies for Discovery of Succinate Dehydrogenase Inhibitors. Article Snippet: Succinate dehydrogenase (SDH) is an ideal fungicidal target.. Here, a three-dimensional quantitative structure− activity relationship (3D-QSAR) was established based on the data of 74 compounds with activity against Rhizoctonia solani.. By integrating our previously reported 3D-QSAR findings with the current model, a series of pyrazole-containing compounds were rationally designed and synthesized. Article Title: Discovery of a Class of Novel Succinate Dehydrogenase Inhibitors Containing a Coumarin Structure. Article Snippet: Succinate dehydrogenase (SDH) has emerged as a highly promising target in modern agricultural research, playing a crucial role in developing environmentally friendly and efficient fungicides for combating agricultural pathogens.. This study presents the discovery of a novel class of SDH inhibitors (I-III) incorporating coumarin segments achieved through an active fragment swapping and linking strategy.. Fungicidal activity assays revealed that several compounds within this series demonstrate significant inhibitory effects against the tested fungal strains. Article Title: Synthesis and Antifungal Activity of 1,2,4-Oxadiazole Derivatives. Article Snippet: Molecular docking was performed with Surflex-Dock implemented in Article Title: Functional Identification of 1-Deoxy-d-Xylulose-5-Phosphate Synthase (DXPS) as an Effective Herbicide Target for the Discovery of Novel Potent Inhibitors through Virtual Screening. Article Snippet: 1-Deoxy-D-xylulose-5-phosphate synthase (DXPS) is a key-limiting enzyme in the methylerythritol phosphate (MEP) pathway.. With only two commercially available herbicides targeting DXPS, there is still a great amount of chemical space to explore new inhibitors targeting DXPS with different skeletons.. In this work, we first used CRISPR/Cas9 and virus-induced gene silencing (VIGS) methods to identify the essential function of DXPS. Article Title: Multi-Modal Design, Synthesis, and Biological Evaluation of Novel Fusidic Acid Derivatives. Article Snippet: The binding modes of FA and different types of EF-Gs were identified using the Surflex-Dock module in Article Title: Hyperthermophilic L-Asparaginase from Thermococcus sibiricus and Its Double Mutant with Increased Activity: Insights into Substrate Specificity and Structure. Article Snippet: Structures of L-asparagine and D-asparagine were generated using the Software:Article Title: Design, synthesis and biological studies of carbazole–thiosemicarbazone hybrids as potential topoisomerase II catalytic inhibitors Article Snippet: .. Molecular docking was performed to identify the potential interactions of compounds C1 and C3 toward Topo II using the Surflex-Dock program incorporated with the |
