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1d (single gel dendrogram) software  (PHORETIX INTERNATIONAL LIMITED)

 
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    PHORETIX INTERNATIONAL LIMITED 1d (single gel dendrogram) software
    1d (Single Gel Dendrogram) Software, supplied by PHORETIX INTERNATIONAL LIMITED, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/dendrogram/1d++single+gel+dendrogram++software/pmc04273488-80-8-13
    Average 90 stars, based on 1 article reviews
    1d (single gel dendrogram) software - by Bioz Stars, 2026-09
    90/100 stars

    Images

    Related Articles

    Denaturing Gradient Gel Electrophoresis:

    Article Title: Comparison of the gut microbe profiles and numbers between patients with liver cirrhosis and healthy individuals.
    Article Snippet: Human liver was closely associated with gut through various biological mechanisms, such as bacterium–gut interactions.. Alterations of gut microbiota seemed to play an important role in induction and promotion of liver damage progression.. The aim of this study was to characterize the gut microbiota in liver cirrhosis patients and assess whether there are alterations in the diversity and similarity of intestinal flora in cirrhotic patients when compared with healthy individuals.

    Article Title: Analysis of the bacterial community in chronic obstructive pulmonary disease sputum samples by denaturing gradient gel electrophoresis and real-time PCR
    Article Snippet: The DGGE gel images were analyzed using Phoretix 1D (Single Gel Dendrogram) software (Phoretix, Newcastle upon Tyne, UK) [ ].

    Software:

    Article Title: Comparison of the gut microbe profiles and numbers between patients with liver cirrhosis and healthy individuals.
    Article Snippet: Human liver was closely associated with gut through various biological mechanisms, such as bacterium–gut interactions.. Alterations of gut microbiota seemed to play an important role in induction and promotion of liver damage progression.. The aim of this study was to characterize the gut microbiota in liver cirrhosis patients and assess whether there are alterations in the diversity and similarity of intestinal flora in cirrhotic patients when compared with healthy individuals.

    Article Title: Analysis of the bacterial community in chronic obstructive pulmonary disease sputum samples by denaturing gradient gel electrophoresis and real-time PCR
    Article Snippet: The DGGE gel images were analyzed using Phoretix 1D (Single Gel Dendrogram) software (Phoretix, Newcastle upon Tyne, UK) [ ].

    Polymerase Chain Reaction:

    Article Title: Comparison of the gut microbe profiles and numbers between patients with liver cirrhosis and healthy individuals.
    Article Snippet: Human liver was closely associated with gut through various biological mechanisms, such as bacterium–gut interactions.. Alterations of gut microbiota seemed to play an important role in induction and promotion of liver damage progression.. The aim of this study was to characterize the gut microbiota in liver cirrhosis patients and assess whether there are alterations in the diversity and similarity of intestinal flora in cirrhotic patients when compared with healthy individuals.

    Article Title: Analysis of the bacterial community in chronic obstructive pulmonary disease sputum samples by denaturing gradient gel electrophoresis and real-time PCR
    Article Snippet: The DGGE gel images were analyzed using Phoretix 1D (Single Gel Dendrogram) software (Phoretix, Newcastle upon Tyne, UK) [ ].



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    Image Search Results


    Interaction map among single-nucleotide polymorphisms (SNPs) of genes on the risk of Acute lymphoblastic leukemia (ALL). Hierarchical clustering dendrogram (a) and Kamada-Kawai (b).

    Journal: Global Medical Genetics

    Article Title: Genetic susceptibility of IKZF1 , ARID5B , and CEBPE polymorphisms to childhood acute lymphoblastic leukemia in Chinese populations: a case-control study

    doi: 10.1016/j.gmg.2025.100084

    Figure Lengend Snippet: Interaction map among single-nucleotide polymorphisms (SNPs) of genes on the risk of Acute lymphoblastic leukemia (ALL). Hierarchical clustering dendrogram (a) and Kamada-Kawai (b).

    Article Snippet: Hierarchical clustering dendrogram (a) and Kamada-Kawai (b).

    Techniques:

    Example dendrogram for frequency band definition using hierarchical clustering Hierarchical clustering dendrogram derived from PFC ECoG signals. Frequency bins (y-axis) are grouped by the similarity of their temporal power profiles, measured by correlation distance (x-axis; smaller distance indicates higher similarity). Branch colors are visual aids automatically assigned by MATLAB. Brackets and labels illustrate an example of manually defined frequency bands (e.g., Theta, Alpha, Beta sub-bands, Gamma) resulting from user interpretation of the clustering structure. See also .

    Journal: STAR Protocols

    Article Title: Protocol for assisting frequency band definition and decoding neural dynamics using hierarchical clustering and multivariate pattern analysis

    doi: 10.1016/j.xpro.2025.103870

    Figure Lengend Snippet: Example dendrogram for frequency band definition using hierarchical clustering Hierarchical clustering dendrogram derived from PFC ECoG signals. Frequency bins (y-axis) are grouped by the similarity of their temporal power profiles, measured by correlation distance (x-axis; smaller distance indicates higher similarity). Branch colors are visual aids automatically assigned by MATLAB. Brackets and labels illustrate an example of manually defined frequency bands (e.g., Theta, Alpha, Beta sub-bands, Gamma) resulting from user interpretation of the clustering structure. See also .

    Article Snippet: Note: The dendrogram function in MATLAB automatically assigns colors to different branches based on the cluster hierarchy and the specified `ColorThreshold` parameter (default 0.5, adjustable by the user).

    Techniques: Derivative Assay

    Visualization of conventional and hierarchically derived frequency band boundaries on the average TFR (A) The average TFR of normalized ECoG power in the PFC is shown in both panels (color indicates normalized power). Overlaid horizontal dashed lines illustrate different frequency band definitions: the left panel depicts conventional band boundaries, while the right panel shows example boundaries derived from hierarchical clustering. (B) The hierarchical clustering dendrogram (same as ) is shown alongside for reference to the bands used in panel (A), right.

    Journal: STAR Protocols

    Article Title: Protocol for assisting frequency band definition and decoding neural dynamics using hierarchical clustering and multivariate pattern analysis

    doi: 10.1016/j.xpro.2025.103870

    Figure Lengend Snippet: Visualization of conventional and hierarchically derived frequency band boundaries on the average TFR (A) The average TFR of normalized ECoG power in the PFC is shown in both panels (color indicates normalized power). Overlaid horizontal dashed lines illustrate different frequency band definitions: the left panel depicts conventional band boundaries, while the right panel shows example boundaries derived from hierarchical clustering. (B) The hierarchical clustering dendrogram (same as ) is shown alongside for reference to the bands used in panel (A), right.

    Article Snippet: Note: The dendrogram function in MATLAB automatically assigns colors to different branches based on the cluster hierarchy and the specified `ColorThreshold` parameter (default 0.5, adjustable by the user).

    Techniques: Derivative Assay