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zen software deconvolution module  (Carl Zeiss)


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    Structured Review

    Carl Zeiss zen software deconvolution module
    Zen Software Deconvolution Module, supplied by Carl Zeiss, used in various techniques. Bioz Stars score: 94/100, based on 40 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/deconvolution+module/ZEN+Module+Deconvolution/pmc09262589-91-31-30
    Average 94 stars, based on 40 article reviews
    zen software deconvolution module - by Bioz Stars, 2026-10
    94/100 stars

    Images

    Related Articles

    Microscopy:

    Article Title: Dynamic Mitotic Localization of the Centrosomal Kinases CDK1, Plk, AurK, and Nek2 in Dictyostelium amoebae
    Article Snippet: .. Image acquisition and microscopy were performed at a Zeiss AxioObserver system equipped with a Zeiss Axiocam 506 mono, a PlanApo 1.4/100× lens, and ZEN 2012 Software (blue edition), including the iterative deconvolution module (Carl Zeiss Mikroskopie GmbH, Jena, Germany). ..

    Software:

    Article Title: Dynamic Mitotic Localization of the Centrosomal Kinases CDK1, Plk, AurK, and Nek2 in Dictyostelium amoebae
    Article Snippet: .. Image acquisition and microscopy were performed at a Zeiss AxioObserver system equipped with a Zeiss Axiocam 506 mono, a PlanApo 1.4/100× lens, and ZEN 2012 Software (blue edition), including the iterative deconvolution module (Carl Zeiss Mikroskopie GmbH, Jena, Germany). ..

    Article Title: Defining the minimal structural requirements of DivIVA in filamentous Actinomycetota
    Article Snippet: To enable image deconvolution, point-spread functions (PSF) were determined using beads with excitation/emission wavelengths of 505/515 nm (green) and 633/660 nm (deep red) from the PS-Speck TM Microscope Point Source Kit (Invitrogen). .. The beads were imaged and PSFs calculated using the Deconvolution module in Zen software (Zeiss, ver 3.9). ..

    Article Title: Essential and dispensable domains of DivIVA for walled growth in filamentous Actinomycetota
    Article Snippet: To enable image deconvolution, point-spread functions (PSF) were determined using beads with excitation/emission wavelengths of 505/515 nm (green) and 633/660 nm (deep red) from the PS-Speck Microscope Point Source Kit (Invitrogen). .. The beads were imaged and PSFs calculated using the Deconvolution module in Zen software (Zeiss, ver 3.9). ..

    Article Title: Essential and dispensable domains of DivIVA for walled growth in filamentous Actinomycetota.
    Article Snippet: To enable image deconvolution, point-spread functions (PSF) were determined using beads with excitation/emission wavelengths of 505/515 nm (green) and 633/660 nm (deep red) from the PS-Speck Microscope Point Source Kit (Invitrogen). .. The beads were imaged and PSFs calculated using the Deconvolution module in Zen software (Zeiss, ver 3.9). ..

    Article Title: Plakoglobin transmits tension across VE-cadherin for vascular leak formation and leukocyte diapedesis.
    Article Snippet: .. Zeiss LSM 980 Airyscan acquisitions were processed with Airyscan Joint Deconvolution processing module in ZEN blue software (Zeiss) to improve signal-to-noise and spatial resolution; LSM 880 images were used without further deconvolution. ..

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells
    Article Snippet: The secondary antibody, anti-rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma-Aldrich, UK). .. Imaging of multiple z -axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. .. For quantification of LC3-positive punctae, images of only the DyLight 550 channel were selected at random and spots were counted in ImageJ.

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells.
    Article Snippet: The secondary antibody, anti- rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma- Aldrich, UK). .. Imaging of multiple z- axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. ..

    Article Title: Plakoglobin transmits tension across VE-cadherin for vascular leak formation and leukocyte diapedesis
    Article Snippet: .. Zeiss LSM 980 Airyscan acquisitions were processed with Airyscan Joint Deconvolution processing module in ZEN blue software (Zeiss) to improve signal-to-noise and spatial resolution; LSM 880 images were used without further deconvolution. ..

    Imaging:

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells
    Article Snippet: The secondary antibody, anti-rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma-Aldrich, UK). .. Imaging of multiple z -axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. .. For quantification of LC3-positive punctae, images of only the DyLight 550 channel were selected at random and spots were counted in ImageJ.

    Article Title: Dynamic regulation of autophagy during Semliki Forest virus infection of neuroblastoma cells.
    Article Snippet: The secondary antibody, anti- rabbit AlexaFluor488, was diluted with blocking buffer and incubated at room temperature for 40 min. Coverslips were mounted using FluoroshieldTM with a DAPI mounting medium (Sigma- Aldrich, UK). .. Imaging of multiple z- axis positions was performed using a Zeiss AxioImager M2 system, and images were deconvoluted using the Zeiss Zen software deconvolution module. ..



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    ( A , B ) HUVEC were treated with histamine (100 µM, Sigma-Aldrich) or thrombin (1 U/ml, CalBiochem) for 10 min, or left untreated with equivalent volumes of vehicle (media) as controls. Cells were subsequently fixed, permeabilized and stained for plakoglobin, β-catenin, and VE-cadherin, all visualized in grayscale to ensure unbiased comparative analysis. Higher magnification images (63X) were acquired using a Zeiss LSM 980 confocal microscope equipped with an <t>Airyscan</t> detector ( A ), while lower magnification images (40X) were captured on a Zeiss LSM 880 confocal microscope ( B ). Scale bars, 25 µm.
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    ( A , B ) HUVEC were treated with histamine (100 µM, Sigma-Aldrich) or thrombin (1 U/ml, CalBiochem) for 10 min, or left untreated with equivalent volumes of vehicle (media) as controls. Cells were subsequently fixed, permeabilized and stained for plakoglobin, β-catenin, and VE-cadherin, all visualized in grayscale to ensure unbiased comparative analysis. Higher magnification images (63X) were acquired using a Zeiss LSM 980 confocal microscope equipped with an <t>Airyscan</t> detector ( A ), while lower magnification images (40X) were captured on a Zeiss LSM 880 confocal microscope ( B ). Scale bars, 25 µm.
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    Carl Zeiss zen software deconvolution module
    ( A , B ) HUVEC were treated with histamine (100 µM, Sigma-Aldrich) or thrombin (1 U/ml, CalBiochem) for 10 min, or left untreated with equivalent volumes of vehicle (media) as controls. Cells were subsequently fixed, permeabilized and stained for plakoglobin, β-catenin, and VE-cadherin, all visualized in grayscale to ensure unbiased comparative analysis. Higher magnification images (63X) were acquired using a Zeiss LSM 980 confocal microscope equipped with an <t>Airyscan</t> detector ( A ), while lower magnification images (40X) were captured on a Zeiss LSM 880 confocal microscope ( B ). Scale bars, 25 µm.
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    Image Search Results


    ( A , B ) HUVEC were treated with histamine (100 µM, Sigma-Aldrich) or thrombin (1 U/ml, CalBiochem) for 10 min, or left untreated with equivalent volumes of vehicle (media) as controls. Cells were subsequently fixed, permeabilized and stained for plakoglobin, β-catenin, and VE-cadherin, all visualized in grayscale to ensure unbiased comparative analysis. Higher magnification images (63X) were acquired using a Zeiss LSM 980 confocal microscope equipped with an Airyscan detector ( A ), while lower magnification images (40X) were captured on a Zeiss LSM 880 confocal microscope ( B ). Scale bars, 25 µm.

    Journal: The EMBO Journal

    Article Title: Plakoglobin transmits tension across VE-cadherin for vascular leak formation and leukocyte diapedesis

    doi: 10.1038/s44318-026-00732-0

    Figure Lengend Snippet: ( A , B ) HUVEC were treated with histamine (100 µM, Sigma-Aldrich) or thrombin (1 U/ml, CalBiochem) for 10 min, or left untreated with equivalent volumes of vehicle (media) as controls. Cells were subsequently fixed, permeabilized and stained for plakoglobin, β-catenin, and VE-cadherin, all visualized in grayscale to ensure unbiased comparative analysis. Higher magnification images (63X) were acquired using a Zeiss LSM 980 confocal microscope equipped with an Airyscan detector ( A ), while lower magnification images (40X) were captured on a Zeiss LSM 880 confocal microscope ( B ). Scale bars, 25 µm.

    Article Snippet: Zeiss LSM 980 Airyscan acquisitions were processed with Airyscan Joint Deconvolution processing module in ZEN blue software (Zeiss) to improve signal-to-noise and spatial resolution; LSM 880 images were used without further deconvolution.

    Techniques: Staining, Microscopy