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data preprocessing assistant for resting-state fmri (dparsf) software  (MathWorks Inc)


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    MathWorks Inc data preprocessing assistant for resting-state fmri (dparsf) software
    Data Preprocessing Assistant For Resting State Fmri (Dparsf) Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/data+preprocessing+software/pmc11978534-132-22-27
    Average 90 stars, based on 1 article reviews
    data preprocessing assistant for resting-state fmri (dparsf) software - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    other:

    Article Title: Reduced local functional connectivity correlates with atypical performances in children with autism spectrum disorder
    Article Snippet: The rs-fMRI data of the 28 ASD subjects and the 23 control images were separately processed using the Data Preprocessing Assistant for Resting-State fMRI (DPARSF) software in Matlab 2017b (David & Skilbeck, ).

    Article Title: Potential correlations between asymmetric disruption of functional connectivity and metabolism in major depressive disorder.
    Article Snippet: Brain Research 1838 (2024) 148977 Processing Assistant for Resting-State fMRI (DPARSF) software (5.1) in MATLAB (Chao-Gan and Yu-Feng, 2010).

    Article Title: Brain overlapping system-level architecture influenced by external magnetic stimulation and internal gene expression in AD-spectrum patients.
    Article Snippet: The brain overlapping system-level architecture is associated with functional information integration in the multiple roles of the same region, and it has been developed as an underlying novel biomarker of brain disease and may characterise the indicators for the treatment of Alzheimer’s disease (AD).. However, it remains uncertain whether these changes are influenced by external magnetic stimulation and internal gene expression.. A total of 73 AD-spectrum patients (52 with true stimulation and 21 with sham stimulation) were underwent four-week neuronavigated transcranial magnetic stimulation (rTMS).

    Article Title: Functional MRI Analysis of Brain Activity in Rats With Diabetic Bladder Dysfunction
    Article Snippet: Finally, 12 NC rats and 12 DM rats were included in the comparative analysis of rs‐fMRI. fMRI data were preprocessed using Statistical Parametric Mapping (SPM12, Wellcome Trust Centre for Neuroimaging) and Data Processing Assistant for Resting‐State fMRI (DPARSF) on MATLAB R2014b.

    Article Title: Altered resting-state brain activity in patients with major depression disorder and bipolar disorder: A regional homogeneity analysis.
    Article Snippet: Background: Major Depressive Disorder (MDD) and Bipolar Disorder (BD) exhibit overlapping depressive symptoms, complicating their differentiation in clinical practice.. Traditional neuroimaging studies have focused on specific regions of interest, but few have employed whole-brain analyses like regional homogeneity (ReHo).. This study aims to differentiate MDD from BD by identifying key brain regions with abnormal ReHo and using advanced machine learning techniques to improve diagnostic accuracy.

    Magnetic Resonance Imaging:

    Article Title: Altered brain activity associated with premature ejaculation improved by electroacupuncture in rats
    Article Snippet: .. The MRI data preprocessing was performed with Statistical Parametric Mapping (SPM8) and Data Processing Assistant for Resting-State fMRI (DPARSF) software based on MATLAB, with the following steps: (1) data format conversion; (2) discarding the first 10 functional time points; (3) slice timing correction; (4) head motion correction; (5) functional and structural image reorientation; (6) structural image coregistration to corresponding functional images; (7) structural images segmented into grey matter, white matter, and cerebrospinal fluid; (8) functional images spatially normalized into the standard space. ..

    Software:

    Article Title: Altered brain activity associated with premature ejaculation improved by electroacupuncture in rats
    Article Snippet: .. The MRI data preprocessing was performed with Statistical Parametric Mapping (SPM8) and Data Processing Assistant for Resting-State fMRI (DPARSF) software based on MATLAB, with the following steps: (1) data format conversion; (2) discarding the first 10 functional time points; (3) slice timing correction; (4) head motion correction; (5) functional and structural image reorientation; (6) structural image coregistration to corresponding functional images; (7) structural images segmented into grey matter, white matter, and cerebrospinal fluid; (8) functional images spatially normalized into the standard space. ..

    Article Title: Neural basis underlying the effects of trait and state anxiety on premature ejaculation revealed by resting-state interhemispheric functional connectivity.
    Article Snippet: Introduction: Anxiety is considered to play a key role in the development and maintenance of premature ejaculation (PE).. In addition, PE patients often co-occur with anxiety, however, the central mechanisms underlying this comorbidity have remained elusive.. This study aimed to explore whether trait and state anxiety-related PE shared common or distinct mechanisms in the brain.

    Functional Assay:

    Article Title: Altered brain activity associated with premature ejaculation improved by electroacupuncture in rats
    Article Snippet: .. The MRI data preprocessing was performed with Statistical Parametric Mapping (SPM8) and Data Processing Assistant for Resting-State fMRI (DPARSF) software based on MATLAB, with the following steps: (1) data format conversion; (2) discarding the first 10 functional time points; (3) slice timing correction; (4) head motion correction; (5) functional and structural image reorientation; (6) structural image coregistration to corresponding functional images; (7) structural images segmented into grey matter, white matter, and cerebrospinal fluid; (8) functional images spatially normalized into the standard space. ..



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    Image Search Results


    Erotica-induced modulation of NFR, pain, N2 and P2 in studies 2 and 3.

    Journal: Neurobiology of Pain

    Article Title: Cerebral peak alpha frequency: Associations with chronic pain onset and pain modulation

    doi: 10.1016/j.ynpai.2025.100180

    Figure Lengend Snippet: Erotica-induced modulation of NFR, pain, N2 and P2 in studies 2 and 3.

    Article Snippet: For analysis of PEPs during CPM and ECON, EEG data were preprocessed and analyzed in BrainVision Analyzer Software (Version 2.1.2.327).

    Techniques:

    Mutilation-induced modulation of NFR, pain, N2 and P2 in studies 2 & 3.

    Journal: Neurobiology of Pain

    Article Title: Cerebral peak alpha frequency: Associations with chronic pain onset and pain modulation

    doi: 10.1016/j.ynpai.2025.100180

    Figure Lengend Snippet: Mutilation-induced modulation of NFR, pain, N2 and P2 in studies 2 & 3.

    Article Snippet: For analysis of PEPs during CPM and ECON, EEG data were preprocessed and analyzed in BrainVision Analyzer Software (Version 2.1.2.327).

    Techniques:

    Grand average EEG waveforms at Cz for ECON. Time windows used for analysis of N2 (90–140 ms) and P2 (280–350 ms) are shaded.

    Journal: Neurobiology of Pain

    Article Title: Cerebral peak alpha frequency: Associations with chronic pain onset and pain modulation

    doi: 10.1016/j.ynpai.2025.100180

    Figure Lengend Snippet: Grand average EEG waveforms at Cz for ECON. Time windows used for analysis of N2 (90–140 ms) and P2 (280–350 ms) are shaded.

    Article Snippet: For analysis of PEPs during CPM and ECON, EEG data were preprocessed and analyzed in BrainVision Analyzer Software (Version 2.1.2.327).

    Techniques:

    (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Journal: bioRxiv

    Article Title: Robust characterization of selectivity of individual neurons to distinct task-relevant behavioral states using calcium imaging

    doi: 10.1101/2024.11.30.626195

    Figure Lengend Snippet: (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Article Snippet: Raw movie data were preprocessed using the Inscopix Data Preprocessing Software (IDPS).

    Techniques: Software