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customized mirna target prediction software  (Arraystar inc)

 
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    Structured Review

    Arraystar inc customized mirna target prediction software
    Yellow represents circRNAs, green represents miRNAs and pink represents <t>miRNA</t> <t>target</t> genes.
    Customized Mirna Target Prediction Software, supplied by Arraystar inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/custom+arraystar+software/customized+mirna+target+prediction+software/pmc05471026-110-7-8
    Average 90 stars, based on 1 article reviews
    customized mirna target prediction software - by Bioz Stars, 2026-11
    90/100 stars

    Images

    1) Product Images from "Circular RNA alterations are involved in resistance to avian leukosis virus subgroup-J-induced tumor formation in chickens"

    Article Title: Circular RNA alterations are involved in resistance to avian leukosis virus subgroup-J-induced tumor formation in chickens

    Journal: Oncotarget

    doi: 10.18632/oncotarget.16442

    Yellow represents circRNAs, green represents miRNAs and pink represents miRNA target genes.
    Figure Legend Snippet: Yellow represents circRNAs, green represents miRNAs and pink represents miRNA target genes.

    Techniques Used:

    Related Articles

    other:

    Article Title: Circular RNA alterations are involved in resistance to avian leukosis virus subgroup-J-induced tumor formation in chickens
    Article Snippet: CircRNA and miRNA interactions were predicted using customized Arraystar miRNA target prediction software based on TargetScan and miRanda [ , ]; the top five putative target miRNAs were identified for upregulated circRNAs in ALV-J-resistant chickens.



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    Hsa_circ_0000326 acted as a sponge of miR-338-3p. ( a ) Putative targets of hsa_circ_0000326 were predicted using custom Arraystar software. ( b ) Effects of five <t>predicted</t> <t>miRNAs</t> and a negative control on the luciferase activity of hsa_circ_0000326, as determined by luciferase reporter assay. ( c ) The results of the luciferase reporter assay validated the interaction between hsa_circ_0000326 and miR-338-3p. ( d ) Colocalization between hsa_circ_0000326 and miR-338-3p was observed (arrowheads) using RNA-FISH in A549 cells. The nuclei were stained with DAPI. Scale bar = 40 μm. ( e ) RNA pulldown assay in A549 cells showed hsa_circ_0000326 could interact with miR-338-3p. The bars with error bars represent the mean ± SD from three independent experiments. * P < 0.05
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    Image Search Results


    Hsa_circ_0000326 acted as a sponge of miR-338-3p. ( a ) Putative targets of hsa_circ_0000326 were predicted using custom Arraystar software. ( b ) Effects of five predicted miRNAs and a negative control on the luciferase activity of hsa_circ_0000326, as determined by luciferase reporter assay. ( c ) The results of the luciferase reporter assay validated the interaction between hsa_circ_0000326 and miR-338-3p. ( d ) Colocalization between hsa_circ_0000326 and miR-338-3p was observed (arrowheads) using RNA-FISH in A549 cells. The nuclei were stained with DAPI. Scale bar = 40 μm. ( e ) RNA pulldown assay in A549 cells showed hsa_circ_0000326 could interact with miR-338-3p. The bars with error bars represent the mean ± SD from three independent experiments. * P < 0.05

    Journal: Journal of Experimental & Clinical Cancer Research : CR

    Article Title: Circular RNA hsa_circ_0000326 acts as a miR-338-3p sponge to facilitate lung adenocarcinoma progression

    doi: 10.1186/s13046-020-01556-4

    Figure Lengend Snippet: Hsa_circ_0000326 acted as a sponge of miR-338-3p. ( a ) Putative targets of hsa_circ_0000326 were predicted using custom Arraystar software. ( b ) Effects of five predicted miRNAs and a negative control on the luciferase activity of hsa_circ_0000326, as determined by luciferase reporter assay. ( c ) The results of the luciferase reporter assay validated the interaction between hsa_circ_0000326 and miR-338-3p. ( d ) Colocalization between hsa_circ_0000326 and miR-338-3p was observed (arrowheads) using RNA-FISH in A549 cells. The nuclei were stained with DAPI. Scale bar = 40 μm. ( e ) RNA pulldown assay in A549 cells showed hsa_circ_0000326 could interact with miR-338-3p. The bars with error bars represent the mean ± SD from three independent experiments. * P < 0.05

    Article Snippet: The relationships between circRNAs and miRNAs were predicted with custom Arraystar miRNA target prediction software based on miRanda ( http://www.microrna.org ) and TargetScan ( www.targetscan.org ).

    Techniques: Software, Negative Control, Luciferase, Activity Assay, Reporter Assay, Staining

    Schematic of the biological roles of hsa_circ_0000326 in lung adenocarcinoma carcinogenesis. Hsa_circ_0000326 could bind to miR-338-3p as a miRNA sponge, exerting its function via regulation of the downstream target RAB14. Knockdown of hsa_circ_0000326 could inhibit lung adenocarcinoma cell proliferation and migration and promote apoptosis in vitro and inhibit tumor formation in vivo

    Journal: Journal of Experimental & Clinical Cancer Research : CR

    Article Title: Circular RNA hsa_circ_0000326 acts as a miR-338-3p sponge to facilitate lung adenocarcinoma progression

    doi: 10.1186/s13046-020-01556-4

    Figure Lengend Snippet: Schematic of the biological roles of hsa_circ_0000326 in lung adenocarcinoma carcinogenesis. Hsa_circ_0000326 could bind to miR-338-3p as a miRNA sponge, exerting its function via regulation of the downstream target RAB14. Knockdown of hsa_circ_0000326 could inhibit lung adenocarcinoma cell proliferation and migration and promote apoptosis in vitro and inhibit tumor formation in vivo

    Article Snippet: The relationships between circRNAs and miRNAs were predicted with custom Arraystar miRNA target prediction software based on miRanda ( http://www.microrna.org ) and TargetScan ( www.targetscan.org ).

    Techniques: Knockdown, Migration, In Vitro, In Vivo