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computer-assisted plotting and reconstruction software neurolucida  (MBF Bioscience)

 
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    Structured Review

    MBF Bioscience computer-assisted plotting and reconstruction software neurolucida
    Computer Assisted Plotting And Reconstruction Software Neurolucida, supplied by MBF Bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/computer-assisted+program/computer+assisted+plotting+and+three+dimensional+reconstruction+program+neurolucida/pmc02860711-73-15-18
    Average 90 stars, based on 1 article reviews
    computer-assisted plotting and reconstruction software neurolucida - by Bioz Stars, 2026-09
    90/100 stars

    Images

    Related Articles

    Fluorescence:

    Article Title: The control of eye movements by the cerebellar nuclei: polysynaptic projections from the fastigial, interpositus posterior and dentate nuclei to lateral rectus motoneurons in primates.
    Article Snippet: Premotor circuits driving extraocular motoneurons and downstream motor outputs of cerebellar nuclei are well known.. However, there is, as yet, no unequivocal account of cerebellar output pathways controlling eye movements in primates.. Using retrograde transneuronal transfer of rabies virus from the lateral rectus (LR) eye muscle, we studied polysynaptic pathways to LR motoneurons in primates.

    Article Title: Horizontal eye movement networks in primates as revealed by retrograde transneuronal transfer of rabies virus: differences in monosynaptic input to "slow" and "fast" abducens motoneurons.
    Article Snippet: The sources of monosynaptic input to “fast” and “slow” abducens motoneurons (MNs) were revealed in primates by retrograde transneuronal tracing with rabies virus after injection either into the distal or central portions of the lateral rectus (LR) muscle, containing, respectively, “en grappe” endplates innervating slow muscle fibers or “en plaque” motor endplates innervating fast fibers.. Rabies uptake involved exclusively motor endplates within the injected portion of the muscle.. At 2.5 days after injections, remarkable differences of innervation of slow and fast MNs were demonstrated.

    Microscopy:

    Article Title: The control of eye movements by the cerebellar nuclei: polysynaptic projections from the fastigial, interpositus posterior and dentate nuclei to lateral rectus motoneurons in primates.
    Article Snippet: Premotor circuits driving extraocular motoneurons and downstream motor outputs of cerebellar nuclei are well known.. However, there is, as yet, no unequivocal account of cerebellar output pathways controlling eye movements in primates.. Using retrograde transneuronal transfer of rabies virus from the lateral rectus (LR) eye muscle, we studied polysynaptic pathways to LR motoneurons in primates.

    Article Title: Horizontal eye movement networks in primates as revealed by retrograde transneuronal transfer of rabies virus: differences in monosynaptic input to "slow" and "fast" abducens motoneurons.
    Article Snippet: The sources of monosynaptic input to “fast” and “slow” abducens motoneurons (MNs) were revealed in primates by retrograde transneuronal tracing with rabies virus after injection either into the distal or central portions of the lateral rectus (LR) muscle, containing, respectively, “en grappe” endplates innervating slow muscle fibers or “en plaque” motor endplates innervating fast fibers.. Rabies uptake involved exclusively motor endplates within the injected portion of the muscle.. At 2.5 days after injections, remarkable differences of innervation of slow and fast MNs were demonstrated.

    other:

    Article Title: Input-output organization of inhibitory neurons in the interstitial nucleus of Cajal projecting to the contralateral trochlear and oculomotor nucleus.
    Article Snippet: Sugiuchi Y, Takahashi M, Shinoda Y. Input-output organization of inhibitory neurons in the interstitial nucleus of Cajal projecting to the contralateral trochlear and oculomotor nucleus.. J Neurophysiol 110: 640– 657, 2013.. First published May 8, 2013; doi:10.1152/jn.01045.2012.— Neurons in the interstitial nucleus of Cajal (INC) that are known to be involved in eye and head movements are excitatory.

    Software:

    Article Title: Posterior parietal cortex areas MIP and LIPv receive eye position and velocity inputs via ascending preposito-thalamo-cortical pathways.
    Article Snippet: Neuronal activity encoding eye position and gaze signals participates in updating the spatial representations found in the posterior parietal cortex and is necessary for spatial accuracy in goal-directed movements.. Using retrograde transneuronal transfer of rabies virus in combination with a conventional tracer, we studied direct and polysynaptic inputs to the ventral lateral intraparietal area (LIPv) and medial intraparietal area (MIP) in non-human primates, to identify possible sources of eye position and gaze signals.. We found that these areas receive disynaptic inputs from the brainstem horizontal eye position integrator network (nucleus prepositus hypoglossi, PH) via the central lateral and ventral lateral thalamic nuclei.

    Article Title: Proprioceptive pathways to posterior parietal areas MIP and LIPv from the dorsal column nuclei and the postcentral somatosensory cortex.
    Article Snippet: The posterior parietal cortex (PPC) serves as an interface between sensory and motor cortices by integrating multisensory signals with motor-related information.. Sensorimotor transformation of somatosensory signals is crucial for the generation and updating of body representations and movement plans.. Using retrograde transneuronal transfer of rabies virus in combination with a conventional tracer, we identified direct and polysynaptic somatosensory pathways to two posterior parietal areas, the ventral lateral intraparietal area (LIPv) and the rostral part of the medial intraparietal area (MIP) in macaque monkeys.

    Article Title: Ascending vestibular pathways to parietal areas MIP and LIPv and efference copy inputs from the medial reticular formation: Functional frameworks for body representations updating and online movement guidance.
    Article Snippet: .. Labeled neurons were analyzed and counted using a computerassisted plotting and three-dimensional reconstruction software (Neurolucida, MBF Bioscience, Williston, VT) on a computer linked to a light microscope. ..

    Article Title: Pathways from the superior colliculus and the nucleus of the optic tract to the posterior parietal cortex in macaque monkeys: Functional frameworks for representation updating and online movement guidance.
    Article Snippet: Funding information European Union Grant EU 5th FP (QLRT-2001-00151, EUROKINESIS) and the Centre National de la Recherche Scientifique.. Abstract The posterior parietal cortex (PPC) integrates multisensory and motor-related information for generating and updating body representations and movement plans.. We used retrograde transneuronal transfer of rabies virus combined with a conventional tracer in macaque monkeys to identify direct and disynaptic pathways to the arm-related rostral medial intraparietal area (MIP), the ventral lateral intraparietal area (LIPv), belonging to the parietal eye field, and the pursuit-related lateral subdivision of the medial superior temporal area (MSTl).

    Article Title: Cerebellar Inputs to Intraparietal Cortex Areas LIP and MIP: Functional Frameworks for Adaptive Control of Eye Movements, Reaching, and Arm/Eye/Head Movement Coordination
    Article Snippet: .. Labeled neurons were visualized by light microscopy, analyzed, and counted using a computer-assisted plotting and reconstruction software (Neurolucida, MBF Bioscience, Colchester, VT). ..

    Light Microscopy:

    Article Title: Posterior parietal cortex areas MIP and LIPv receive eye position and velocity inputs via ascending preposito-thalamo-cortical pathways.
    Article Snippet: Neuronal activity encoding eye position and gaze signals participates in updating the spatial representations found in the posterior parietal cortex and is necessary for spatial accuracy in goal-directed movements.. Using retrograde transneuronal transfer of rabies virus in combination with a conventional tracer, we studied direct and polysynaptic inputs to the ventral lateral intraparietal area (LIPv) and medial intraparietal area (MIP) in non-human primates, to identify possible sources of eye position and gaze signals.. We found that these areas receive disynaptic inputs from the brainstem horizontal eye position integrator network (nucleus prepositus hypoglossi, PH) via the central lateral and ventral lateral thalamic nuclei.

    Article Title: Proprioceptive pathways to posterior parietal areas MIP and LIPv from the dorsal column nuclei and the postcentral somatosensory cortex.
    Article Snippet: The posterior parietal cortex (PPC) serves as an interface between sensory and motor cortices by integrating multisensory signals with motor-related information.. Sensorimotor transformation of somatosensory signals is crucial for the generation and updating of body representations and movement plans.. Using retrograde transneuronal transfer of rabies virus in combination with a conventional tracer, we identified direct and polysynaptic somatosensory pathways to two posterior parietal areas, the ventral lateral intraparietal area (LIPv) and the rostral part of the medial intraparietal area (MIP) in macaque monkeys.

    Article Title: Ascending vestibular pathways to parietal areas MIP and LIPv and efference copy inputs from the medial reticular formation: Functional frameworks for body representations updating and online movement guidance.
    Article Snippet: .. Labeled neurons were analyzed and counted using a computerassisted plotting and three-dimensional reconstruction software (Neurolucida, MBF Bioscience, Williston, VT) on a computer linked to a light microscope. ..

    Article Title: Pathways from the superior colliculus and the nucleus of the optic tract to the posterior parietal cortex in macaque monkeys: Functional frameworks for representation updating and online movement guidance.
    Article Snippet: Funding information European Union Grant EU 5th FP (QLRT-2001-00151, EUROKINESIS) and the Centre National de la Recherche Scientifique.. Abstract The posterior parietal cortex (PPC) integrates multisensory and motor-related information for generating and updating body representations and movement plans.. We used retrograde transneuronal transfer of rabies virus combined with a conventional tracer in macaque monkeys to identify direct and disynaptic pathways to the arm-related rostral medial intraparietal area (MIP), the ventral lateral intraparietal area (LIPv), belonging to the parietal eye field, and the pursuit-related lateral subdivision of the medial superior temporal area (MSTl).

    Article Title: Cerebellar Inputs to Intraparietal Cortex Areas LIP and MIP: Functional Frameworks for Adaptive Control of Eye Movements, Reaching, and Arm/Eye/Head Movement Coordination
    Article Snippet: .. Labeled neurons were visualized by light microscopy, analyzed, and counted using a computer-assisted plotting and reconstruction software (Neurolucida, MBF Bioscience, Colchester, VT). ..

    Labeling:

    Article Title: Proprioceptive pathways to posterior parietal areas MIP and LIPv from the dorsal column nuclei and the postcentral somatosensory cortex.
    Article Snippet: The posterior parietal cortex (PPC) serves as an interface between sensory and motor cortices by integrating multisensory signals with motor-related information.. Sensorimotor transformation of somatosensory signals is crucial for the generation and updating of body representations and movement plans.. Using retrograde transneuronal transfer of rabies virus in combination with a conventional tracer, we identified direct and polysynaptic somatosensory pathways to two posterior parietal areas, the ventral lateral intraparietal area (LIPv) and the rostral part of the medial intraparietal area (MIP) in macaque monkeys.

    Article Title: Ascending vestibular pathways to parietal areas MIP and LIPv and efference copy inputs from the medial reticular formation: Functional frameworks for body representations updating and online movement guidance.
    Article Snippet: .. Labeled neurons were analyzed and counted using a computerassisted plotting and three-dimensional reconstruction software (Neurolucida, MBF Bioscience, Williston, VT) on a computer linked to a light microscope. ..

    Article Title: Cerebellar Inputs to Intraparietal Cortex Areas LIP and MIP: Functional Frameworks for Adaptive Control of Eye Movements, Reaching, and Arm/Eye/Head Movement Coordination
    Article Snippet: .. Labeled neurons were visualized by light microscopy, analyzed, and counted using a computer-assisted plotting and reconstruction software (Neurolucida, MBF Bioscience, Colchester, VT). ..



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    Image Search Results


    Depiction of the mechanical rotation system. (A) Image of the connected motor outside the RF shielding. The drive rod connects to the motor and is passed directly through a waveguide to the coils. (B) A Fusion360 model of the coil pair within the magnet. The RF coils ( red and yellow ) rest on the bore tube ( green ), which positions the coils centrally and guides rotation. A three‐dimensional‐printed connection ( gray ) affixes the coils to the drive rod ( blue ) axially and houses their circuit boards.

    Journal: Magnetic Resonance in Medicine

    Article Title: Radial TRASE: 2D RF encoding through mechanical rotation and active digital decoupling

    doi: 10.1002/mrm.70104

    Figure Lengend Snippet: Depiction of the mechanical rotation system. (A) Image of the connected motor outside the RF shielding. The drive rod connects to the motor and is passed directly through a waveguide to the coils. (B) A Fusion360 model of the coil pair within the magnet. The RF coils ( red and yellow ) rest on the bore tube ( green ), which positions the coils centrally and guides rotation. A three‐dimensional‐printed connection ( gray ) affixes the coils to the drive rod ( blue ) axially and houses their circuit boards.

    Article Snippet: Using the computer‐assisted modeling (CAM) program Fusion360 (Autodesk, California, USA), both coils were previously 3D‐printed with the optimized wire pattern modeled directly into their formers.

    Techniques:

    Demonstration of sequential slice Radial TRASE imaging. The pulse sequence for each slice consisted of 200‐μs hard pulses, echo train length of 128, echo time of 2000 μs, repetition time of 1000 ms, acquisition window of 1000 μs, four averages, and 201 radial spokes. A uniform B 0 coil within the magnet bore is used to shift the resonance slice due to the static axial gradient. Imaging was performed with a phantom containing nine 8‐mm‐diameter water vials. One vial is positioned centrally, with the remaining eight angled toward the center by 24°. (A) Sequential slice images were obtained for B 0 shift coil currents of −3, −1.5, 0, 1.5, and 3 A. The expected shift between each slice is 10.4 mm with a reconstructed partition thickness of 3.36 mm. From left to right, the ring of vials spreads outward, indicating successful shifting of the resonance slice position by the uniform B 0 coil. (B) Fusion360 model with a different perspective of the imaged vial phantom.

    Journal: Magnetic Resonance in Medicine

    Article Title: Radial TRASE: 2D RF encoding through mechanical rotation and active digital decoupling

    doi: 10.1002/mrm.70104

    Figure Lengend Snippet: Demonstration of sequential slice Radial TRASE imaging. The pulse sequence for each slice consisted of 200‐μs hard pulses, echo train length of 128, echo time of 2000 μs, repetition time of 1000 ms, acquisition window of 1000 μs, four averages, and 201 radial spokes. A uniform B 0 coil within the magnet bore is used to shift the resonance slice due to the static axial gradient. Imaging was performed with a phantom containing nine 8‐mm‐diameter water vials. One vial is positioned centrally, with the remaining eight angled toward the center by 24°. (A) Sequential slice images were obtained for B 0 shift coil currents of −3, −1.5, 0, 1.5, and 3 A. The expected shift between each slice is 10.4 mm with a reconstructed partition thickness of 3.36 mm. From left to right, the ring of vials spreads outward, indicating successful shifting of the resonance slice position by the uniform B 0 coil. (B) Fusion360 model with a different perspective of the imaged vial phantom.

    Article Snippet: Using the computer‐assisted modeling (CAM) program Fusion360 (Autodesk, California, USA), both coils were previously 3D‐printed with the optimized wire pattern modeled directly into their formers.

    Techniques: Imaging, Sequencing