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InforMax Inc clustalw algorithm
Clustalw Algorithm, supplied by InforMax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/clustal+w+algorithm/clustalw+algorithm/pm15380366-84-36-38
Average 90 stars, based on 1 article reviews
clustalw algorithm - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

Sequencing:

Article Title: The telomere-linked helicase (TLH) gene family in Magnaporthe oryzae: revised gene structure reveals a novel TLH-specific protein motif.
Article Snippet: Telomere-linked RecQ helicase (TLH) genes have been identiWed in several fungi, where they occur as small gene families with each member copy residing within »10 kb of a telomere.. Here we describe the characterization of all 11 TLH gene copies in the reference strain of the fungus Magnaporthe oryzae.. A consensus gene prediction revealed that the previously reported TLH1 gene is actually a mutated copy, and the full-length gene is almost two times longer.

Article Title: Identification of a novel C20-elongase gene from the marine microalgae Pavlova viridis and its expression in Escherichia coli.
Article Snippet: Pavlova viridis, a species of a unicellular marine microalgae, is rich in the very-long-chain polyunsaturated fatty acids, such as eicosapentaenoic acid (EPA, 20:5n-3) and docosahexaenoic acid (DHA, 22:6n-3).. A new elongase gene (elkj), with high identity with a functionally characterized C20-elongase of Pavlova lutheri, was isolated via reverse transcriptase-polymerase chain reaction using the primers designed from conserved motifs and 5′/3′ rapid amplification of cDNA ends.. The coding region of 314 amino acids predicted a protein of 34 kDa, which contained seven transmembrane domains with its C-terminal in the cytoplasm and located in the endoplasmic reticulum.

Generated:

Article Title: The telomere-linked helicase (TLH) gene family in Magnaporthe oryzae: revised gene structure reveals a novel TLH-specific protein motif.
Article Snippet: Telomere-linked RecQ helicase (TLH) genes have been identiWed in several fungi, where they occur as small gene families with each member copy residing within »10 kb of a telomere.. Here we describe the characterization of all 11 TLH gene copies in the reference strain of the fungus Magnaporthe oryzae.. A consensus gene prediction revealed that the previously reported TLH1 gene is actually a mutated copy, and the full-length gene is almost two times longer.

Software:

Article Title: HBV drug resistance methods
Article Snippet: The percentage identity (and similarity) between sequences can be determined by using e.g. the GAP program (part of GCG, Genetics Computer Group, software; now available via Accelrys on http://www.accelrys.com). .. Alignments between sequences can e.g. be made using the ClustalW algorithm (e.g. part of GCG software or part of VNTI software distributed by InforMax Inc.). ..

Article Title: Modified nitrilases and their use in methods for the production of carboxylic acids
Article Snippet: .. Alignments e.g., as presented in FIGS. 4 and 5, were performed using the ClustalW algorithm (Version 1.7 as included in the AlignX feature of the Vector NTI Suite 7 Software package; Informax; Weight Matrix: Blosum for proteins); Thompson J D et al. (1994) Nucl Acids Res 22:4673-4680; Higgins D G et al. (1996) Methods Enzymol 266:383-402) using the following parameter settings: Gap opening penalty: 10; Gap extension penalty: 0.05; Gap separation penalty range: 8; % identity for alignment delay: 40. ..

Article Title: Methods and compositions for identifying yeast
Article Snippet: .. Determination of percent identity or similarity between sequences can be done, for example, by using the GAP program (Genetics Computer Group, software; now available via Accelrys on www.accelrys.com), and alignments can be done using, for example, the ClustalW algorithm (VNTI software, InforMax Inc.). ..

Article Title: Methods and compositions for car T cell therapy
Article Snippet: .. Determination of percent identity or similarity between sequences can be done, for example, by using the GAP program (Genetics Computer Group, software; now available via Accelrys on http://www.accelrys.com), and alignments can be done using, for example, the ClustalW algorithm (VNTI software, InforMax Inc.). ..

other:

Article Title: A deep-branching clade of retrovirus-like retrotransposons in bdelloid rotifers
Article Snippet: Bioinformatics Sequences were assembled with Phred/Phrap/Consed ( www.phrap.org ), and aligned with the AlignX program, based on the ClustalW algorithm, from the VectorNTI suite 7 (InforMax).



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