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Vizgen Inc cellpose v 1 0 2 algorithm
Cellpose V 1 0 2 Algorithm, supplied by Vizgen Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cellpose+v+1+0+2+algorithm/algorithm+cellpose/pmc12449769-460-8-18
Average 86 stars, based on 1 article reviews
cellpose v 1 0 2 algorithm - by Bioz Stars, 2026-10
86/100 stars

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other:

Article Title: Aging-induced hepatocyte CD44 drives IL6/STAT3 signaling and associates with impaired neighboring T cell function
Article Snippet: MERSCOPE images were segmented using the Vizgen Post-processing Tool (VPT, v1.3.0) with Cellpose (models cyto2 and nuclei, 2D).

Article Title: Decoding the Spatial and Epigenetic Logic of Early Skin Development
Article Snippet: Cell segmentation was performed using the built-in CellPose 2.0 algorithm, with transcripts assigned to cell boundaries as part of the Vizgen workflow.

Article Title: TREM2 macrophages are associated with enhanced response to PD-1 blockade in human hepatocellular carcinoma
Article Snippet: Cell segmentation was performed on nuclear and cytoplasmic stains using the Vizgen Postprocessing Tool ( https://vizgen.github.io/vizgen-postprocessing/ ), with Cellpose v.1.0.2 applied across all available z-slices.

Article Title: Spatial gene expression maps in vertebrate limbs display conserved and regenerative species-specific features within connective tissue
Article Snippet: Segmentation was performed using CellPose implemented through the Vizgen Post-processing Tool.

Article Title: Macrophage signaling associates with fibrogenic program activation in periductal fibroblasts in pediatric primary sclerosing cholangitis.
Article Snippet: Cell Segmentation Cell segmentation was performed using a VizGen-optimized implementation of the Cellpose algorithm (51) on the DAPI and cell boundary images.

Article Title: A hormetic transcriptional program coregulates invasion, proliferation and dormancy to define metastatic potential.
Article Snippet: Cell Segmentation: To improve the MERSCOPE onboard cell segmentation, we re-segmented the data using Cellpose2 v2.2.362 implemented in the vizgen post-porcessing tool (VPT) v1.2.2 framework (https://github.com/Vizgen/vizgen-postprocessing).

Staining:

Article Title: 3D spatial organization of heterogeneous nkx2.5+ progenitors in the zebrafish heart field pre-patterns cardiovascular development.
Article Snippet: .. Based on the AR TI CL E IN P RE SS raw images and metadata from these three staining channels, cell boundaries were defined using the Cellpose algorithm (version 1.0.2)59 within the Vizgen Post-processing Tool vpt (version 1.3.0). ..

Article Title: 3D spatial organization of heterogeneous nkx2.5 + progenitors in the zebrafish heart field pre-patterns cardiovascular development
Article Snippet: .. Based on the raw images and metadata from these three staining channels, cell boundaries were defined using the Cellpose algorithm (version 1.0.2) within the Vizgen Post-processing Tool vpt (version 1.3.0). ..



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Vizgen Inc cellpose v 1 0 2 algorithm
Cellpose V 1 0 2 Algorithm, supplied by Vizgen Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cellpose+v+1+0+2+algorithm/algorithm+cellpose/pmc12449769-460-8-18
Average 86 stars, based on 1 article reviews
cellpose v 1 0 2 algorithm - by Bioz Stars, 2026-10
86/100 stars
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