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CombiMatrix oligonucleotide microarrays
Oligonucleotide Microarrays, supplied by CombiMatrix, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cdna+microarray+analyses/oligonucleotide+arrays/pmc03614911-285-6-34
Average 90 stars, based on 1 article reviews
oligonucleotide microarrays - by Bioz Stars, 2026-10
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Article Title: Differential expression microarrays reveal candidate genes potentially associated with reproductive dysfunction of captive-reared prawn Penaeus monodon
Article Snippet: Contents lists available at SciVerse ScienceDirect Aquaculture j ourna l homepage: www.e lsev ie r .com/ locate /aqua-on l ine Differential expression microarrays reveal candidate genes potentially associated with reproductive dysfunction of captive-reared prawn Penaeus monodon Philip Brady a,b, Abigail Elizur a,c,⁎, Scott F. Cummins c, Nguyen H. Ngyuen c, Richard Williams b, Wayne Knibb c a The Queensland Department of Primary Industries and Fisheries, Animal Science, Bribie Island, Queensland 4507, Australia b School of Land, Crop and Food Sciences, The University of Queensland, St Lucia, Brisbane, Queensland 4072, Australia c Faculty of Science, Health, Education and Engineering, University of the Sunshine Coast, Maroochydore, Queensland 4558, Australia ⁎ Corresponding author at: Faculty of Science, Healt University of the Sunshine Coast, Maroochydore, Qld 5459 4813; fax: +61 7 5430 2889.. E-mail address: aelizur@usc.edu.au (A. Elizur).. 0044-8486/$ – see front matter © 2013 Elsevier B.V. All http://dx.doi.org/10.1016/j.aquaculture.2013.02.038 a b s t r a c t a r t i c l e i n f o Article history: Received 18 September 2012 Received in revised form 29 December 2012 Accepted 26 February 2013 Available online 6 March 2013 Keywords: Penaeus monodon Reproductive dysfunction Microarrays The Black tiger prawn Penaeus monodon is an internationally significant aquaculture species.

Gene Expression:

Article Title: Toward biotechnology in space: High-throughput instruments for in situ biological research beyond Earth.
Article Snippet: Accepted Manuscript Toward biotechnology in space: High-throughput instruments for in situ biological research beyond Earth Fathi Karouia, Kianoosh Peyvan, Andrew Pohorille PII: S0734-9750(17)30042-3 DOI: doi: 10.1016/j.biotechadv.2017.04.003 Reference: JBA 7119 To appear in: Biotechnology Advances Received date: 20 October 2016 Revised date: 27 March 2017 Accepted date: 12 April 2017 Please cite this article as: Fathi Karouia, Kianoosh Peyvan, Andrew Pohorille , Toward biotechnology in space: High-throughput instruments for in situ biological research beyond Earth.. The address for the corresponding author was captured as affiliation for all authors.. Please check if appropriate.

Article Title: Multiplex microarray of serially deposited biomolecules on a microarray
Article Snippet: .. Instrumentation The ElectraSense microarray, ElectraSense Reader and methodology for ECD have been described previously (Ghindilis A L, Smith M W, Schwarzkopf K R, Roth K M, Peyvan K, et al. (2007) CombiMatrix oligonucleotide arrays: genotyping and gene expression assays employing electrochemical detection. .. Biosensors & Bioelectronics 22: 1853-1860; Roth K M, Peyvan K, Schwarzkopf K R, Ghindilis A (2006) Electrochemical detection of short DNA oligomer hybridization using the CombiMatrix ElectraSense microarray reader.

Article Title: Multiplexed sensing of biomolecules with optically detected magnetic resonance of nitrogen-vacancy centers in diamond.
Article Snippet: .. A. L. Ghindilis et al., CombiMatrix oligonucleotide arrays: Genotyping and gene expression assays employing electrochemical detection. ..

Amplification:

Article Title: Systems Biology of the qa Gene Cluster in Neurospora crassa
Article Snippet: The same design was used on all Combimatrix chips here, and each chip had eight rDNA-derived oligonucleotides. .. 750 ng of total RNA (as determined by a Nano LabChip (Agilent Technologies, Inc.)) is amplified and hybridized to oligonucleotide arrays (Combimatrix, Inc.) as previously described with one change. .. Laser confocal scanning is performed on a GSI Lumonics ScanArray 5000 (now manufactured by Perkin-Elmer, Inc.) using two laser power and a photomultiplier (PMT) gain settings adjusted less than 10% between arrays from one of the two settings.

Microarray:

Article Title: Multiplex microarray of serially deposited biomolecules on a microarray
Article Snippet: .. Instrumentation The ElectraSense microarray, ElectraSense Reader and methodology for ECD have been described previously (Ghindilis A L, Smith M W, Schwarzkopf K R, Roth K M, Peyvan K, et al. (2007) CombiMatrix oligonucleotide arrays: genotyping and gene expression assays employing electrochemical detection. .. Biosensors & Bioelectronics 22: 1853-1860; Roth K M, Peyvan K, Schwarzkopf K R, Ghindilis A (2006) Electrochemical detection of short DNA oligomer hybridization using the CombiMatrix ElectraSense microarray reader.

Article Title: Genome-wide analysis of transcription and photosynthesis inhibition in the harmful dinoflagellate Prorocentrum minimum in response to the biocide copper sulfate.
Article Snippet: Copper is an essential trace metal for organisms; however, excess copper may damage cellular processes.. Their efficiency and physiological effects of biocides have been well documented; however, molecular transcriptome responses to biocides are insufficiently studied.. In the present study, a 6.0 K oligonucleotide chip was developed to investigate the molecular responses of the harmful dinoflagellate Prorocentrum minimum to copper sulfate (CuSO4) treatment.

Software:

Article Title: Anopheles NF-?B -regulated splicing factors direct pathogen-specific repertoires of the hypervariable pattern recognition receptor AgDscam
Article Snippet: .. AgDscam exon transcript abundnace analysis with oligonucleotide microarrays Three different 21 to 23 -mere probe sequences targeting the specific sequences of AgDscam 99 exons were designed using Array Designer 4 software, and represented on Combimatrix microarrays that were used for assays as previously described ( Dong et al. , 2006a ; Dong et al. , 2009 ). ..



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Summary of gene expression in breast muscle of BJY and AA chickens determined by  microarray  analysis

Journal: BMC Genomics

Article Title: Identification of differentially expressed genes and pathways for intramuscular fat deposition in pectoralis major tissues of fast-and slow-growing chickens

doi: 10.1186/1471-2164-13-213

Figure Lengend Snippet: Summary of gene expression in breast muscle of BJY and AA chickens determined by microarray analysis

Article Snippet: Agilent cDNA microarray analyses were conducted to determine gene expression profiles of breast muscle sampled at different developmental stages of BJY and AA chickens.

Techniques: Expressing, Microarray

Comparison of  microarray  and q-PCR fold-changes for selected transcripts in breast muscle of BJY or AA chickens

Journal: BMC Genomics

Article Title: Identification of differentially expressed genes and pathways for intramuscular fat deposition in pectoralis major tissues of fast-and slow-growing chickens

doi: 10.1186/1471-2164-13-213

Figure Lengend Snippet: Comparison of microarray and q-PCR fold-changes for selected transcripts in breast muscle of BJY or AA chickens

Article Snippet: Agilent cDNA microarray analyses were conducted to determine gene expression profiles of breast muscle sampled at different developmental stages of BJY and AA chickens.

Techniques: Microarray

Technical validation of microarray results by q-PCR by correlation: (a) BJY and (b) AA chickens. The r value indicates Spearman’s Correlation between the two methods.

Journal: BMC Genomics

Article Title: Identification of differentially expressed genes and pathways for intramuscular fat deposition in pectoralis major tissues of fast-and slow-growing chickens

doi: 10.1186/1471-2164-13-213

Figure Lengend Snippet: Technical validation of microarray results by q-PCR by correlation: (a) BJY and (b) AA chickens. The r value indicates Spearman’s Correlation between the two methods.

Article Snippet: Agilent cDNA microarray analyses were conducted to determine gene expression profiles of breast muscle sampled at different developmental stages of BJY and AA chickens.

Techniques: Microarray