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bootscan analysis (Simplot Science)

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Simplot Science bootscan analysis
Bootscan Analysis, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+analysis+of+simplot+software/analysis+bootscan/pm41012690-4-4-6
Average 86 stars, based on 1 article reviews

bootscan analysis - by Bioz Stars, 2026-09

86/100 stars

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Recombinant:

Article Title: Epidemiological dynamics and molecular characteristics of HIV-1 among transgender women in the Central-West region of Brazil
Article Snippet: .. Potential recombinant sequences were identified using a bootscan analysis in the SimPlot version 3.5.1 program (sliding window of 200 bp, step size of 10 bp). ..

Article Title: Epidemiological dynamics and molecular characteristics of HIV-1 among transgender women in the Central-West region of Brazil.
Article Snippet: .. Potential recombinant sequences were identified using a bootscan analysis in the SimPlot version 3.5.1 program (sliding window of 200 bp, step size of 10 bp). ..

other:

Article Title: Phylogenetic Characteristics and High Prevalence of a Merbecovirus in Hedgehogs from Greenspace of a Metropolis, China
Article Snippet: To assess potential recombination events in the genomes of hedgehog CoVs identified in this study, Bootscan analysis was performed using SimPlot (v3.5.1; SCRoftware, Johns Hopkins University School of Medicine, Baltimore, MD, USA) with a 1000 bp sliding window and 200 bp step size, based on the Kimura two-parameter model and the Neighbor-Joining method.

Sequencing:

Article Title: Adaptive Evolution and Distinct Mutation Signatures of Full‐Length HBV Quasispecies in HBeAg‐Negative Chronic Hepatitis B
Article Snippet: .. Using RDP4 results, the major and minor parental quasispecies sequences, together with one reference genotype C and one genotype H sequence from NCBI, were selected for BootScan analysis using SimPlot to validate intrahost recombination. ..