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Simplot Science simplot v3 5 1
Simplot V3 5 1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+algorithm+simplot+v3%2E5%2E1/1+5+simplot+v3/pmc12907510-151-10-10
Average 86 stars, based on 1 article reviews
simplot v3 5 1 - by Bioz Stars, 2026-10
86/100 stars

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Article Title: Identification of a novel second-generation HIV-1 circulating recombinant form, CRF182_0708, in Yunnan, China.
Article Snippet: Recombination patterns were characterized using SimPlot v3.5.1.

Article Title: Identification of a novel second-generation HIV-1 circulating recombinant form, CRF182_0708, in Yunnan, China.
Article Snippet: The putative recombination breakpoints suggested by these tools were subsequently confirmed using bootscanning analysis implemented in SimPlot v3.5.1.

Article Title: Persistent Circulation of Pseudorabies Virus Variants in China: Genomic Features, Pathogenic Characteristics, and Cross‐Protective Efficacy of Variant Strain Vaccines
Article Snippet: The recombination breakpoints were further refined through analyses using the Genetic Algorithm for SimPlot v3.5.1 [ , ].

Article Title: Identification of a novel second-generation HIV-1 circulating recombinant form, CRF182_0708, in Yunnan, China.
Article Snippet: A total of 88 NFLG sequences were included in the analysis, comprising the study sequences and reference strains representing subtype B, subtype C, and BC-related CRFs, with HIV-1 group O and group P sequences included as outgroups. (B) Similarity plot and bootscanning analyses of the NFLG were performed using SimPlot v3.5.1.

Article Title: Characterization of a Goose-Origin Avian Orthoreovirus with Interferon Suppression Activity.
Article Snippet: Potential recombination events were detected using RDP4 and SimPlot (v3.5.1) with default settings.

Article Title: Reclassification and Recombination Analysis of Porcine Epidemic Diarrhea Virus Strains in South Korea Based on Spike Gene Analysis.
Article Snippet: Next, we performed genome-scale similarity comparisons of CNU-22S11 with other PEDV subgroups using SimPlot v3.5.1.

Article Title: Emergence of norovirus GII.7 and predominance of recombinant strains in pediatric acute gastroenteritis in Japan, 2021-2024.
Article Snippet: 1 Department of Applied Molecular Chemistry, Graduate School of Industrial Technology, Nihon University, Chiba, Japan 2 Division of Microbiology, Department of Pathology and Microbiology, Nihon University School of Medicine, 30-1 Ohyaguchi Kamicho, Itabashi-ku, Tokyo 173-8610, Japan 3 Department of Microbiology, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand 4 Center of Excellence in Emerging and Re-emerging Diarrheal Viruses, Chiang Mai University, Chiang Mai, Thailand 5 Cell and Tissue Culture Laboratory, Centre for Advanced Research in Sciences (CARS), University of Dhaka, Dhaka, Bangladesh 6 Nishimura Pediatric Clinic, Kyoto, Japan 7 Kobayashi Pediatric Clinic, Shizuoka, Japan 8 Sugita Children Clinic, Osaka, Japan Abstract Noroviruses (NoVs) are a leading cause of acute gastroenteritis (AGE) worldwide, with genetic diversity driven by recombination and genotype replacement.. This study investigated the prevalence and molecular characteristics of NoVs among Japanese children with AGE from July 2021 to June 2024.. A total of 1,095 stool samples were collected from three prefectures (Kyoto, Osaka, and Shizuoka), and NoV RNA was detected in 456 cases (41.6%).

Article Title: Recombination with a vaccine strain drives the evolution of a more virulent phenotype in avian infectious bronchitis virus
Article Snippet: The analysis was conducted with SimPlot v3.5.1, using a window size of 500 bp and a step size of 50 bp.



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Simplot Science bootscan algorithm simplot v3.5.1
Bootscan Algorithm Simplot V3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bootscan+algorithm+simplot+v3%2E5%2E1/bootscan+analysis+simplot+version+3+5+1/pmc10434060-96-6-5
Average 90 stars, based on 1 article reviews
bootscan algorithm simplot v3.5.1 - by Bioz Stars, 2026-10
90/100 stars
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