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basic local alignment search tool for nucleotide sequences  (Biotechnology Information)

 
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    Structured Review

    Biotechnology Information basic local alignment search tool for nucleotide sequences
    Basic Local Alignment Search Tool For Nucleotide Sequences, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+sequence+tools/basic+local+alignment+search+tool+for+nucleotide+sequences/pmc11732287-153-25-13
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool for nucleotide sequences - by Bioz Stars, 2026-10
    90/100 stars

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    other:

    Article Title: Using superior plant growth-promoting microorganisms through bioprospecting to create inoculants for peanut (Arachis hypogaea L.) farming
    Article Snippet: Sequences were compared to the National Center for Biotechnology Information GenBank databases using the Basic Local Alignment Search Tool nucleotidic (BLASTn) search program, and the closely related sequences found were included in phylogenetic analyses.

    Article Title: Isolation and Characterization of Lactic Acid Bacteria From “ Trites ” Having the Ability to Produce α-Glucosidase Inhibitors
    Article Snippet: Sequences of bacterial isolates were compared with sequences in GenBank (National Center for Biotechnology Information; https://www.ncbi.nih.gov ) using the Basic Local Alignment Search Tool for nucleotide sequences.

    Article Title: Diversity of sanitizer-resistant bacteria on food contact surface and handling equipment in squid sushi production line.
    Article Snippet: In this work, bacteria presented in environmental samples in the processing area of squid sushi (SQ) production plants were isolated and evaluated for their ability to survive or resist various sanitizing agents.. A total of 105 environmental swab samples from the food contact surface (FCS) and handling equipment were collected.. A high load of bacteria (>2 log CFU/cm2) was observed in 29 samples of three sampling visits.

    Article Title: Assessment of mycobiota in Thai pigmented rice: Insights into ochratoxin A and citrinin production by Aspergillus and Penicillium species
    Article Snippet: Pigmented rice has gained interest for its nutritional and health benefits attributed to its bioactive compounds.. Despite these advantages, the vulnerability of pigmented rice to mycotoxin contamination poses a major concern.. This study examined the mycobiota of seven Thai pigmented rice varieties, with a focus on fungi capable of producing ochratoxin A (OTA) and citrinin.

    Derivative Assay:

    Article Title: Enhanced bioelectrochemical degradation of Thiabendazole using biostimulated Tunisian hypersaline sediments: kinetics, efficiency, and microbial community shifts
    Article Snippet: Data sequences were processed using the MR DNA analysis pipeline. .. The operational taxonomic unit (out) taxonomic classification was achieved by comparing the sequences using the Basic Local Alignment Search Tool for nucleotide sequences (BLASTn) against a curated database derived from the National Center for Biotechnology Information (NCBI). ..

    Sequencing:

    Article Title: Impacts of rhizoremediation and biostimulation on soil microbial community, for enhanced degradation of petroleum hydrocarbons in crude oil-contaminated agricultural soils.
    Article Snippet: Hydrocarbonoclastic bacterial strains were isolated from rhizosphere of plants growing in crude oil-contaminated sites of Assam, India.. These bacteria showed plant growth-promoting attributes, even when exposed to crude oil.. Two independent pot trials were conducted to test the rhizodegradation ability of the bacterial consortium in combination of plants Azadirchta indica or Delonix regia in crude oil-contaminated soil.

    Article Title: Occurrence of Heat-Resistant Mold Ascospores in Pineapple and Sugarcane Field Soils in Thailand
    Article Snippet: PCR products (500–600 kb) were sequenced using the barcode-tagged sequencing technique by U2Bio (Thailand) Co., Ltd. .. The sequence of each fungal isolate was compared with partial ITS sequences available in the National Center for Biotechnology Information (NCBI) database using the Basic Local Alignment Search Tool for Nucleotide Sequences (BLASTN; https://blast.ncbi.nlm.nih.gov/Blast.cgi ) to identify these fungal species. ..

    Functional Assay:

    Article Title: Multi-Omics Exploration of Obesity Biomarkers in Sedentary and Weight Loss Cohorts
    Article Snippet: Sedentary behavior for two years during the coronavirus disease 2019 (COVID-19) pandemic contributes to weight gain.. Gut microbiota and blood metabolome are related to body mass index (BMI) and indicate individual metabolic changes.. Surgery and exercise are effective weight-loss methods.



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