Review



plenti cmvtight egfp blast  (Addgene inc)


Bioz Verified Symbol Addgene inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
    • 93
      Buy from Supplier

    Structured Review

    Addgene inc plenti cmvtight egfp blast
    Plenti Cmvtight Egfp Blast, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+software+program/pLenti+CMVtight+eGFP+Blast+(w782-1)+(Plasmid+%2326584)/pm38692097-189-9-13
    Average 93 stars, based on 2 article reviews
    plenti cmvtight egfp blast - by Bioz Stars, 2026-10
    93/100 stars

    Images

    Related Articles

    Plasmid Preparation:

    Article Title: The catalytic efficiency of METTL16 affects cellular processes by governing the intracellular S-adenosylmethionine setpoint
    Article Snippet: .. pLenti CMVtight eGFP Blast (w782-1); pNC1745 , Eric Campeau , Addgene plasmid # 26584. ..

    Article Title: The catalytic efficiency of METTL16 affects cellular processes by governing the intracellular S-adenosylmethionine setpoint.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Methionine-free DMEM Sigma Cat#D0422 Sodium Pyruvate ThermoFisher Cat#11360070 L-cysteine Sigma Cat#C7352 L-methionine Sigma Cat#M9625 Doxycycline Fisher Cat#BP2653 Auxin Sigma Cat#I5148 AGI-24512 (MAT2Ai) MCE Cat#HY-112130 PBS + CaCl2 + MgCl2 Sigma Cat#D8662 Gibson Assembly Master Mix NEB Cat#M5510A Trypsin Sigma Cat#T4174 Cycloheximide Sigma Cat#01810-1G cRNA Sigma Cat#R6625 4SU ThermoFisher Cat#J60679.MD Biotin-HPDP ThermoFisher Cat#21341 poly(A) RNA Sigma Cat#P9403 ssDNA Sigma Cat#S3126 Polybrene Sigma Cat#H9268 Antarctic phosphatase NEB Cat#M0289S Critical commercial assays CellTiter-Glo Reagent ProMega Cat#G7570 NEBNext Magnesium RNA Fragmentation Module NEB Cat#E6150S RiboMinus Eukaryote System V2 ThermoFisher A15026 NEBNext Small RNA Library Prep Set for Illumina NEB E7330S NEBNext Multiplex Oligos for Illumina, Index primers set 1 NEB E7335S NEBNext Multiplex Oligos for Illumina, Index primers set 2 NEB E7500S Monarch Spin PCR & DNA Cleanup Kit NEB T1130S Deposited data Raw and analyzed GLORI-Seq data This paper GEO: GSE296342 Experimental models: Cell lines HEK 293T Dr. Joshua Mendell RRID: CVCL_0063 HCT116 ATCC Cat#CCL-247; RRID: CVCL_0291 Oligonucleotides See Table S5 This paper, ordered from Millipore N/A Recombinant DNA pMD2.G Didier Trono Addgene plasmid # 12259 psPAX2 Didier Trono Addgene plasmid # 12260 lentiCRISPRv2 Sanjana et al. 76 Addgene plasmid # 52961 pX459 Ran et al. 77 Addgene plasmid # 62988 pMGS46 Sathyan et al. 78 Addgene plasmid # 126580 pBluescript SK+; pNC65 Stratagene, La Jolla, CA Cat#212205 pcDNA-flag; pNC226 Sahin et al. 79 N/A pOG44; pNC450 ThermoFisher Cat#V600520 Talen L; pNC1050 Sajana et al. 80 Addgene plasmid # 35431 Talen R; pNC1051 Sajana et al. 80 Addgene plasmid # 35432 WT flag-METTL16; pNC1099 Pendleton et al. 21 N/A (Continued on next page) Cell Reports 44, 115966, July 22, 2025 19 .. REAGENT or RESOURCE SOURCE IDENTIFIER catalytic dead N184A flag-METTL16; pNC1145 Doxtader et al. 29 N/A pLenti-sgMTAP #1; pNC1151 This paper N/A pLenti-sgMTAP #2; pNC1152 This paper N/A pLenti-sgMTAP #3; pNC1153 This paper N/A pLenti-CRISPR-vs-NT; pNC1154 Dr. John Schoggins N/A hyperactive K163A flag-mettl16; pNC1298 Doxtader et al. 29 N/A pBS-Flag-mAID-T2A-Hyg; pNC1393 This paper N/A M16-C-sg1/2-Hyg; pNC1408 This paper N/A Cas9 and guide; pNC1410 This paper N/A M16-C-sg2-Flag-AID-Donor; pNC1486 This paper N/A pBS-AAVS1-TetOn-Hyg-FRT; pNC1537 Genscript, see Table S6 for sequence N/A pBS-AAVS1-TetON-ARF16 PB1 - TIR1; pNC1549 This paper N/A WT myc-METTL16; pNC1680 This paper N/A EV, aka myc-STOP; pNC1688 This paper N/A catalytic dead N184A myc-METTL16; pNC1692 This paper N/A hyperactive K163A myc-METTL16; pNC1693 This paper N/A Flag-mAID-T2A-Hyg Insert Genewiz, see Table S6 for sequence N/A pBS-hAAVS1-TetOFF-HA-OsTIR1-HYGFRT48; pNC1746 This paper N/A pLenti CMVtight eGFP Blast (w782-1); pNC1745 Eric Campeau Addgene plasmid # 26584 pLenti Tet-Off V5-MAT2A-T2A-eGFP; pNC1761 This paper N/A Software and algorithms ImageQuantTL Ver 8.2.0 GE Healthcare Life Sciences N/A Image Studio Ver 5.2 Li-Cor N/A Prism 10 GraphPad N/A OptimaApp Ver 2.20R2 BMG LabTech N/A Trim Galore (0.6.10) Dr. Felix Krueger RRID:SCR_011847 STAR (2.7.11b) Dobin et al. 81 RRID:SCR_004463 exomePeak2 (1.16.2) W. Zhen https://github.com/ZW-xjtlu/exomePeak2 R (4.4.1) R Development Core Team https://www.r-project.org/ BEDTools (2.30.0) Quinlan and Hall 82 RRID:SCR_006646 metaplotR Olarerin-George and Jaffrey 83 N/A Flexbar (v. 3.5.0) Dodt et al. 84 N/A STAR (v.2.7.5c) Dobin et al. 81 RRID:SCR_004463 GLORI-tools Shen et al. 85 https://github.com/liucongcas/GLORI- tools Bullseye R-Universe https://github.com/mflamand/Bullseye Jalview Version: 2.11.4.1 Waterhouse et al. 86 N/A Weblogo Crooks et al. 87 N/A Biorender https://BioRender.com N/A Other 0.45 μm filter Millipore Cat#SLHPR33RS Dynabeads Protein A ThermoFisher Cat#10002D Dynabeads TM MyOne TM Streptavidin T1 ThermoFisher Cat#65602 (Continued on next page) 20 Cell Reports 44, 115966, July 22, 2025 .. HCT116-derived cell lines were grown at 37 ◦ C with 5% CO 2 in DMEM (Sigma D5796) supplemented with 10% tetracycline tested FBS (bio-techne R&D Systems S10350), penicillin-streptomycin (Sigma P0781), and 2mM L-glutamine (Fisher BP379-100).

    Polymerase Chain Reaction:

    Article Title: Grainyhead-like-2, an epithelial master programmer, promotes interferon induction and suppresses breast cancer recurrence.
    Article Snippet: IRF1 and IRF3–5D sequences were PCR amplified from clones kindly provided by Alan Brasier (University of Wisconsin) (Yang et al., 2017) or John Hiscott (Pasteur Institute, Rome, via Matthew Frieman, University of Maryland) (Romieu-Mourez et al., 2006). .. PCR fragments were subcloned into the BstBI-XbaI site of pLenti CMVtight eGFP Blast (Addgene), thus removing the EGFP insert, and sequence-verified. ..

    Sequencing:

    Article Title: Grainyhead-like-2, an epithelial master programmer, promotes interferon induction and suppresses breast cancer recurrence.
    Article Snippet: IRF1 and IRF3–5D sequences were PCR amplified from clones kindly provided by Alan Brasier (University of Wisconsin) (Yang et al., 2017) or John Hiscott (Pasteur Institute, Rome, via Matthew Frieman, University of Maryland) (Romieu-Mourez et al., 2006). .. PCR fragments were subcloned into the BstBI-XbaI site of pLenti CMVtight eGFP Blast (Addgene), thus removing the EGFP insert, and sequence-verified. ..

    Article Title: The catalytic efficiency of METTL16 affects cellular processes by governing the intracellular S-adenosylmethionine setpoint.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Methionine-free DMEM Sigma Cat#D0422 Sodium Pyruvate ThermoFisher Cat#11360070 L-cysteine Sigma Cat#C7352 L-methionine Sigma Cat#M9625 Doxycycline Fisher Cat#BP2653 Auxin Sigma Cat#I5148 AGI-24512 (MAT2Ai) MCE Cat#HY-112130 PBS + CaCl2 + MgCl2 Sigma Cat#D8662 Gibson Assembly Master Mix NEB Cat#M5510A Trypsin Sigma Cat#T4174 Cycloheximide Sigma Cat#01810-1G cRNA Sigma Cat#R6625 4SU ThermoFisher Cat#J60679.MD Biotin-HPDP ThermoFisher Cat#21341 poly(A) RNA Sigma Cat#P9403 ssDNA Sigma Cat#S3126 Polybrene Sigma Cat#H9268 Antarctic phosphatase NEB Cat#M0289S Critical commercial assays CellTiter-Glo Reagent ProMega Cat#G7570 NEBNext Magnesium RNA Fragmentation Module NEB Cat#E6150S RiboMinus Eukaryote System V2 ThermoFisher A15026 NEBNext Small RNA Library Prep Set for Illumina NEB E7330S NEBNext Multiplex Oligos for Illumina, Index primers set 1 NEB E7335S NEBNext Multiplex Oligos for Illumina, Index primers set 2 NEB E7500S Monarch Spin PCR & DNA Cleanup Kit NEB T1130S Deposited data Raw and analyzed GLORI-Seq data This paper GEO: GSE296342 Experimental models: Cell lines HEK 293T Dr. Joshua Mendell RRID: CVCL_0063 HCT116 ATCC Cat#CCL-247; RRID: CVCL_0291 Oligonucleotides See Table S5 This paper, ordered from Millipore N/A Recombinant DNA pMD2.G Didier Trono Addgene plasmid # 12259 psPAX2 Didier Trono Addgene plasmid # 12260 lentiCRISPRv2 Sanjana et al. 76 Addgene plasmid # 52961 pX459 Ran et al. 77 Addgene plasmid # 62988 pMGS46 Sathyan et al. 78 Addgene plasmid # 126580 pBluescript SK+; pNC65 Stratagene, La Jolla, CA Cat#212205 pcDNA-flag; pNC226 Sahin et al. 79 N/A pOG44; pNC450 ThermoFisher Cat#V600520 Talen L; pNC1050 Sajana et al. 80 Addgene plasmid # 35431 Talen R; pNC1051 Sajana et al. 80 Addgene plasmid # 35432 WT flag-METTL16; pNC1099 Pendleton et al. 21 N/A (Continued on next page) Cell Reports 44, 115966, July 22, 2025 19 .. REAGENT or RESOURCE SOURCE IDENTIFIER catalytic dead N184A flag-METTL16; pNC1145 Doxtader et al. 29 N/A pLenti-sgMTAP #1; pNC1151 This paper N/A pLenti-sgMTAP #2; pNC1152 This paper N/A pLenti-sgMTAP #3; pNC1153 This paper N/A pLenti-CRISPR-vs-NT; pNC1154 Dr. John Schoggins N/A hyperactive K163A flag-mettl16; pNC1298 Doxtader et al. 29 N/A pBS-Flag-mAID-T2A-Hyg; pNC1393 This paper N/A M16-C-sg1/2-Hyg; pNC1408 This paper N/A Cas9 and guide; pNC1410 This paper N/A M16-C-sg2-Flag-AID-Donor; pNC1486 This paper N/A pBS-AAVS1-TetOn-Hyg-FRT; pNC1537 Genscript, see Table S6 for sequence N/A pBS-AAVS1-TetON-ARF16 PB1 - TIR1; pNC1549 This paper N/A WT myc-METTL16; pNC1680 This paper N/A EV, aka myc-STOP; pNC1688 This paper N/A catalytic dead N184A myc-METTL16; pNC1692 This paper N/A hyperactive K163A myc-METTL16; pNC1693 This paper N/A Flag-mAID-T2A-Hyg Insert Genewiz, see Table S6 for sequence N/A pBS-hAAVS1-TetOFF-HA-OsTIR1-HYGFRT48; pNC1746 This paper N/A pLenti CMVtight eGFP Blast (w782-1); pNC1745 Eric Campeau Addgene plasmid # 26584 pLenti Tet-Off V5-MAT2A-T2A-eGFP; pNC1761 This paper N/A Software and algorithms ImageQuantTL Ver 8.2.0 GE Healthcare Life Sciences N/A Image Studio Ver 5.2 Li-Cor N/A Prism 10 GraphPad N/A OptimaApp Ver 2.20R2 BMG LabTech N/A Trim Galore (0.6.10) Dr. Felix Krueger RRID:SCR_011847 STAR (2.7.11b) Dobin et al. 81 RRID:SCR_004463 exomePeak2 (1.16.2) W. Zhen https://github.com/ZW-xjtlu/exomePeak2 R (4.4.1) R Development Core Team https://www.r-project.org/ BEDTools (2.30.0) Quinlan and Hall 82 RRID:SCR_006646 metaplotR Olarerin-George and Jaffrey 83 N/A Flexbar (v. 3.5.0) Dodt et al. 84 N/A STAR (v.2.7.5c) Dobin et al. 81 RRID:SCR_004463 GLORI-tools Shen et al. 85 https://github.com/liucongcas/GLORI- tools Bullseye R-Universe https://github.com/mflamand/Bullseye Jalview Version: 2.11.4.1 Waterhouse et al. 86 N/A Weblogo Crooks et al. 87 N/A Biorender https://BioRender.com N/A Other 0.45 μm filter Millipore Cat#SLHPR33RS Dynabeads Protein A ThermoFisher Cat#10002D Dynabeads TM MyOne TM Streptavidin T1 ThermoFisher Cat#65602 (Continued on next page) 20 Cell Reports 44, 115966, July 22, 2025 .. HCT116-derived cell lines were grown at 37 ◦ C with 5% CO 2 in DMEM (Sigma D5796) supplemented with 10% tetracycline tested FBS (bio-techne R&D Systems S10350), penicillin-streptomycin (Sigma P0781), and 2mM L-glutamine (Fisher BP379-100).

    Software:

    Article Title: The catalytic efficiency of METTL16 affects cellular processes by governing the intracellular S-adenosylmethionine setpoint.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Methionine-free DMEM Sigma Cat#D0422 Sodium Pyruvate ThermoFisher Cat#11360070 L-cysteine Sigma Cat#C7352 L-methionine Sigma Cat#M9625 Doxycycline Fisher Cat#BP2653 Auxin Sigma Cat#I5148 AGI-24512 (MAT2Ai) MCE Cat#HY-112130 PBS + CaCl2 + MgCl2 Sigma Cat#D8662 Gibson Assembly Master Mix NEB Cat#M5510A Trypsin Sigma Cat#T4174 Cycloheximide Sigma Cat#01810-1G cRNA Sigma Cat#R6625 4SU ThermoFisher Cat#J60679.MD Biotin-HPDP ThermoFisher Cat#21341 poly(A) RNA Sigma Cat#P9403 ssDNA Sigma Cat#S3126 Polybrene Sigma Cat#H9268 Antarctic phosphatase NEB Cat#M0289S Critical commercial assays CellTiter-Glo Reagent ProMega Cat#G7570 NEBNext Magnesium RNA Fragmentation Module NEB Cat#E6150S RiboMinus Eukaryote System V2 ThermoFisher A15026 NEBNext Small RNA Library Prep Set for Illumina NEB E7330S NEBNext Multiplex Oligos for Illumina, Index primers set 1 NEB E7335S NEBNext Multiplex Oligos for Illumina, Index primers set 2 NEB E7500S Monarch Spin PCR & DNA Cleanup Kit NEB T1130S Deposited data Raw and analyzed GLORI-Seq data This paper GEO: GSE296342 Experimental models: Cell lines HEK 293T Dr. Joshua Mendell RRID: CVCL_0063 HCT116 ATCC Cat#CCL-247; RRID: CVCL_0291 Oligonucleotides See Table S5 This paper, ordered from Millipore N/A Recombinant DNA pMD2.G Didier Trono Addgene plasmid # 12259 psPAX2 Didier Trono Addgene plasmid # 12260 lentiCRISPRv2 Sanjana et al. 76 Addgene plasmid # 52961 pX459 Ran et al. 77 Addgene plasmid # 62988 pMGS46 Sathyan et al. 78 Addgene plasmid # 126580 pBluescript SK+; pNC65 Stratagene, La Jolla, CA Cat#212205 pcDNA-flag; pNC226 Sahin et al. 79 N/A pOG44; pNC450 ThermoFisher Cat#V600520 Talen L; pNC1050 Sajana et al. 80 Addgene plasmid # 35431 Talen R; pNC1051 Sajana et al. 80 Addgene plasmid # 35432 WT flag-METTL16; pNC1099 Pendleton et al. 21 N/A (Continued on next page) Cell Reports 44, 115966, July 22, 2025 19 .. REAGENT or RESOURCE SOURCE IDENTIFIER catalytic dead N184A flag-METTL16; pNC1145 Doxtader et al. 29 N/A pLenti-sgMTAP #1; pNC1151 This paper N/A pLenti-sgMTAP #2; pNC1152 This paper N/A pLenti-sgMTAP #3; pNC1153 This paper N/A pLenti-CRISPR-vs-NT; pNC1154 Dr. John Schoggins N/A hyperactive K163A flag-mettl16; pNC1298 Doxtader et al. 29 N/A pBS-Flag-mAID-T2A-Hyg; pNC1393 This paper N/A M16-C-sg1/2-Hyg; pNC1408 This paper N/A Cas9 and guide; pNC1410 This paper N/A M16-C-sg2-Flag-AID-Donor; pNC1486 This paper N/A pBS-AAVS1-TetOn-Hyg-FRT; pNC1537 Genscript, see Table S6 for sequence N/A pBS-AAVS1-TetON-ARF16 PB1 - TIR1; pNC1549 This paper N/A WT myc-METTL16; pNC1680 This paper N/A EV, aka myc-STOP; pNC1688 This paper N/A catalytic dead N184A myc-METTL16; pNC1692 This paper N/A hyperactive K163A myc-METTL16; pNC1693 This paper N/A Flag-mAID-T2A-Hyg Insert Genewiz, see Table S6 for sequence N/A pBS-hAAVS1-TetOFF-HA-OsTIR1-HYGFRT48; pNC1746 This paper N/A pLenti CMVtight eGFP Blast (w782-1); pNC1745 Eric Campeau Addgene plasmid # 26584 pLenti Tet-Off V5-MAT2A-T2A-eGFP; pNC1761 This paper N/A Software and algorithms ImageQuantTL Ver 8.2.0 GE Healthcare Life Sciences N/A Image Studio Ver 5.2 Li-Cor N/A Prism 10 GraphPad N/A OptimaApp Ver 2.20R2 BMG LabTech N/A Trim Galore (0.6.10) Dr. Felix Krueger RRID:SCR_011847 STAR (2.7.11b) Dobin et al. 81 RRID:SCR_004463 exomePeak2 (1.16.2) W. Zhen https://github.com/ZW-xjtlu/exomePeak2 R (4.4.1) R Development Core Team https://www.r-project.org/ BEDTools (2.30.0) Quinlan and Hall 82 RRID:SCR_006646 metaplotR Olarerin-George and Jaffrey 83 N/A Flexbar (v. 3.5.0) Dodt et al. 84 N/A STAR (v.2.7.5c) Dobin et al. 81 RRID:SCR_004463 GLORI-tools Shen et al. 85 https://github.com/liucongcas/GLORI- tools Bullseye R-Universe https://github.com/mflamand/Bullseye Jalview Version: 2.11.4.1 Waterhouse et al. 86 N/A Weblogo Crooks et al. 87 N/A Biorender https://BioRender.com N/A Other 0.45 μm filter Millipore Cat#SLHPR33RS Dynabeads Protein A ThermoFisher Cat#10002D Dynabeads TM MyOne TM Streptavidin T1 ThermoFisher Cat#65602 (Continued on next page) 20 Cell Reports 44, 115966, July 22, 2025 .. HCT116-derived cell lines were grown at 37 ◦ C with 5% CO 2 in DMEM (Sigma D5796) supplemented with 10% tetracycline tested FBS (bio-techne R&D Systems S10350), penicillin-streptomycin (Sigma P0781), and 2mM L-glutamine (Fisher BP379-100).



    Similar Products

    basic local alignment search tool software program  (Biotechnology Information)
    90
    Biotechnology Information basic local alignment search tool software program
    A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of <t>nucleotide</t> substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.
    Basic Local Alignment Search Tool Software Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+software+program/basic+local+alignment+search+tool++blast+/pmc11526053-134-14-12
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool software program - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    national centre for biotechnology information basic local alignments search tool (blast) software program  (Biotechnology Information)
    90
    Biotechnology Information national centre for biotechnology information basic local alignments search tool (blast) software program
    A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of <t>nucleotide</t> substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.
    National Centre For Biotechnology Information Basic Local Alignments Search Tool (Blast) Software Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+software+program/national+center+for+biotechnology+information+tool/pm29964350-100-5-8
    Average 90 stars, based on 1 article reviews
    national centre for biotechnology information basic local alignments search tool (blast) software program - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    basic local alignment search tool (blast) software program  (Biotechnology Information)
    90
    Biotechnology Information basic local alignment search tool (blast) software program
    A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of <t>nucleotide</t> substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.
    Basic Local Alignment Search Tool (Blast) Software Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+software+program/basic+local+alignment+search+tool++blast+/10__3957_slash_056__047__0092-65-10-8
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool (blast) software program - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    basic local alignment search tool (blast®) software programs  (Biotechnology Information)
    90
    Biotechnology Information basic local alignment search tool (blast®) software programs
    A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of <t>nucleotide</t> substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.
    Basic Local Alignment Search Tool (Blast®) Software Programs, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+software+program/basic+local+alignment+search+tool++blast+/us09441241-399-16-33
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool (blast®) software programs - by Bioz Stars, 2026-10
    90/100 stars
    		  Buy from Supplier
    basic local alignment search tool computer program  (Biotechnology Information)
    86
    Biotechnology Information basic local alignment search tool computer program
    A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of <t>nucleotide</t> substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.
    Basic Local Alignment Search Tool Computer Program, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+software+program/alignment+basic+local+search+tool/10__1017_slash_s0007114514000993-109-9-19
    Average 86 stars, based on 1 article reviews
    basic local alignment search tool computer program - by Bioz Stars, 2026-10
    86/100 stars
    		  Buy from Supplier

    Image Search Results


    A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of nucleotide substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.

    Journal: IJID Regions

    Article Title: Targeted deep sequencing of mycobacteria species from extrapulmonary sites not identified by routine line probe assays: A retrospective laboratory analysis of stored clinical cultures

    doi: 10.1016/j.ijregi.2024.100464

    Figure Lengend Snippet: A phylogenetic tree was generated using consensus hsp65 gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from this study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of nucleotide substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1H.1, 5H.1, 6H.1, 7H.1, 10H.1, 15H.1, 18H.1, 20H.1, 22H.1, 22H.2, 23H.1, 26H.1, 27H.1, and 27H.2.

    Article Snippet: The consensus sequences were subjected to analysis through the National Centre for Biotechnology Information nucleotide Basic Local Alignment Search Tool software program [ ].

    Techniques: Generated, Amplification, Sequencing, Labeling

    A phylogenetic tree was generated using consensus rpoB gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from the study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of nucleotide substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1R.1, 2R.1, 6R.1, 8R.1, 9R.1, 10R.1, 10R.2, 10R.3, 10R.4, 10R.5, 15R.1, 16R.1, 18R.1, 20R.1, 21R.1, 22R.1, 23R.1, 24R.1, 26R.1, 27R.1, 28R.1.

    Journal: IJID Regions

    Article Title: Targeted deep sequencing of mycobacteria species from extrapulmonary sites not identified by routine line probe assays: A retrospective laboratory analysis of stored clinical cultures

    doi: 10.1016/j.ijregi.2024.100464

    Figure Lengend Snippet: A phylogenetic tree was generated using consensus rpoB gene sequences of unidentified mycobacteria species obtained through Oxford Nanopore Technology amplicon-based deep sequencing. The tree illustrates slow-growing mycobacteria represented by red branches and rapid growers indicated by blue branches. Unidentified Mycobacterium species sequences from the study are labeled in red. Members of the Mycobacterium tuberculosis complex are highlighted in the yellow range. The scale bar expresses the average number of nucleotide substitutions per site. Circular markers signify the bootstrap support of branches within the tree. The isolates included in the construction of the phylogenetic tree are those represented by the reads listed in : 1R.1, 2R.1, 6R.1, 8R.1, 9R.1, 10R.1, 10R.2, 10R.3, 10R.4, 10R.5, 15R.1, 16R.1, 18R.1, 20R.1, 21R.1, 22R.1, 23R.1, 24R.1, 26R.1, 27R.1, 28R.1.

    Article Snippet: The consensus sequences were subjected to analysis through the National Centre for Biotechnology Information nucleotide Basic Local Alignment Search Tool software program [ ].

    Techniques: Generated, Amplification, Sequencing, Labeling