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basic local alignment search tool  (GenBase Inc)

 
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    Structured Review

    GenBase Inc basic local alignment search tool
    The whole architecture <t>of</t> <t>GenBase</t> The user-friendly generic sequence submission portal consists of 9 sections that enable real-time validation: Submitter, Reference, Technology, Nucleotide, Set/Batch, Category, Modifiers, Features, and Overview. An asterisk (*) indicates optional steps in SARS-CoV-2 submissions. GenBase integrates GenBank sequences for daily updates. Processed data are stored in distributed accession and ES index databases. Released sequences in GenBase are easily accessible, searchable, downloadable, and analyzable. They are also exchanged with GenBank, promoting data sharing and accessibility. ES, Elasticsearch; FTP, File Transfer Protocol; API, Application Programming Interface; <t>BLAST,</t> Basic Local Alignment Search Tool.
    Basic Local Alignment Search Tool, supplied by GenBase Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/basic+local+alignment+search+tool+computer+program/basic+local+alignment+search+tool/pmc11434157-79-8-1
    Average 90 stars, based on 1 article reviews
    basic local alignment search tool - by Bioz Stars, 2026-09
    90/100 stars

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    1) Product Images from "GenBase: A Nucleotide Sequence Database"

    Article Title: GenBase: A Nucleotide Sequence Database

    Journal: Genomics, Proteomics & Bioinformatics

    doi: 10.1093/gpbjnl/qzae047

    The whole architecture of GenBase The user-friendly generic sequence submission portal consists of 9 sections that enable real-time validation: Submitter, Reference, Technology, Nucleotide, Set/Batch, Category, Modifiers, Features, and Overview. An asterisk (*) indicates optional steps in SARS-CoV-2 submissions. GenBase integrates GenBank sequences for daily updates. Processed data are stored in distributed accession and ES index databases. Released sequences in GenBase are easily accessible, searchable, downloadable, and analyzable. They are also exchanged with GenBank, promoting data sharing and accessibility. ES, Elasticsearch; FTP, File Transfer Protocol; API, Application Programming Interface; BLAST, Basic Local Alignment Search Tool.
    Figure Legend Snippet: The whole architecture of GenBase The user-friendly generic sequence submission portal consists of 9 sections that enable real-time validation: Submitter, Reference, Technology, Nucleotide, Set/Batch, Category, Modifiers, Features, and Overview. An asterisk (*) indicates optional steps in SARS-CoV-2 submissions. GenBase integrates GenBank sequences for daily updates. Processed data are stored in distributed accession and ES index databases. Released sequences in GenBase are easily accessible, searchable, downloadable, and analyzable. They are also exchanged with GenBank, promoting data sharing and accessibility. ES, Elasticsearch; FTP, File Transfer Protocol; API, Application Programming Interface; BLAST, Basic Local Alignment Search Tool.

    Techniques Used: Sequencing, Biomarker Discovery

    Related Articles

    Sequencing:

    Article Title: GenBase: A Nucleotide Sequence Database
    Article Snippet: .. Thirdly, GenBase incorporates sequence analysis tools such as Basic Local Alignment Search Tool (BLAST) [ ], making it convenient for users to analyze sequences within the platform. .. In addition, GenBase establishes linkages with several databases in NGDC, including the metadata databases BioProject and BioSample, as well as the literature database OpenLB ( https://ngdc.cncb.ac.cn/openlb/home ).



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