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Addgene inc pcc 09
Pcc 09, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 9 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/barcoding/pCC_09+-+hU6-BsmBI-sgRNA(E%2BF)-barcode-EFS-KRAB-dCas9-NLS-2A-Puro-WPRE+(Plasmid+%23139094)/pm38472198-346-2-3
Average 93 stars, based on 9 article reviews
pcc 09 - by Bioz Stars, 2026-09
93/100 stars

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Related Articles

Amplification:

Article Title: Comprehensive dissection of cis- regulatory elements in a 2.8 Mb topologically associated domain in six human cancers
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094) and concentrated the ligation products using isopropanol precipitation. .. We electroporated the concentrated ligation product with Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245 mm BioAssay plates (Corning 431111) with LB / agar 100 ug/ml Carbenicillin.

Article Title: Comprehensive dissection of cis-regulatory elements in a 2.8 Mb topologically associated domain in six human cancers.
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described117 using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094)118 and concentrated the ligationproductsusing isopropanolprecipitation.Weelectroporated the concentrated ligation productwith Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245mmBioAssay plates (Corning 431111) with LB / agar 100 ug/mlCarbenicillin.Usingdilutionplating,wemeasureda representation of 500 colonies per gRNA. .. The bacteria were harvested after 14 h of incubation at 37 °C, scrapedwith 5-10ml of LBmedia andprocessedwith a PlasmidPlusmaxi prep kit (Qiagen 12965).Weused 1maxi prep column per 0.25 g of bacteria.

Clone Assay:

Article Title: Comprehensive dissection of cis- regulatory elements in a 2.8 Mb topologically associated domain in six human cancers
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094) and concentrated the ligation products using isopropanol precipitation. .. We electroporated the concentrated ligation product with Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245 mm BioAssay plates (Corning 431111) with LB / agar 100 ug/ml Carbenicillin.

Article Title: Comprehensive dissection of cis-regulatory elements in a 2.8 Mb topologically associated domain in six human cancers.
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described117 using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094)118 and concentrated the ligationproductsusing isopropanolprecipitation.Weelectroporated the concentrated ligation productwith Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245mmBioAssay plates (Corning 431111) with LB / agar 100 ug/mlCarbenicillin.Usingdilutionplating,wemeasureda representation of 500 colonies per gRNA. .. The bacteria were harvested after 14 h of incubation at 37 °C, scrapedwith 5-10ml of LBmedia andprocessedwith a PlasmidPlusmaxi prep kit (Qiagen 12965).Weused 1maxi prep column per 0.25 g of bacteria.

Modification:

Article Title: Comprehensive dissection of cis- regulatory elements in a 2.8 Mb topologically associated domain in six human cancers
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094) and concentrated the ligation products using isopropanol precipitation. .. We electroporated the concentrated ligation product with Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245 mm BioAssay plates (Corning 431111) with LB / agar 100 ug/ml Carbenicillin.

Article Title: Utilizing a dual endogenous reporter system to identify functional regulators of aberrant stem cell and differentiation activity in colorectal cancer
Article Snippet: .. pCC_01 and pCC_09 (Addgene #139094) were modified to incorporate Capture Sequences 1 and 2 at the 3’ end of guide sequences. ..

Article Title: Identifying regulators of aberrant stem cell and differentiation activity in colorectal cancer using a dual endogenous reporter system
Article Snippet: .. pCC_01 and pCC_09 (Addgene #139094) were modified to incorporate Capture Sequences 1 and 2 at the 3′ end of guide sequences. ..

Article Title: Comprehensive dissection of cis-regulatory elements in a 2.8 Mb topologically associated domain in six human cancers.
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described117 using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094)118 and concentrated the ligationproductsusing isopropanolprecipitation.Weelectroporated the concentrated ligation productwith Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245mmBioAssay plates (Corning 431111) with LB / agar 100 ug/mlCarbenicillin.Usingdilutionplating,wemeasureda representation of 500 colonies per gRNA. .. The bacteria were harvested after 14 h of incubation at 37 °C, scrapedwith 5-10ml of LBmedia andprocessedwith a PlasmidPlusmaxi prep kit (Qiagen 12965).Weused 1maxi prep column per 0.25 g of bacteria.

Ligation:

Article Title: Comprehensive dissection of cis- regulatory elements in a 2.8 Mb topologically associated domain in six human cancers
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094) and concentrated the ligation products using isopropanol precipitation. .. We electroporated the concentrated ligation product with Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245 mm BioAssay plates (Corning 431111) with LB / agar 100 ug/ml Carbenicillin.

Article Title: Comprehensive dissection of cis-regulatory elements in a 2.8 Mb topologically associated domain in six human cancers.
Article Snippet: The gRNAs were synthesized as a pool (Twist Biosciences). .. We amplified and cloned the Twist pool as previously described117 using Gibson assembly into an all-in-one KRAB-dCas9 vector with the F + E modified sgRNA scaffold (pCC_09, Addgene 139094)118 and concentrated the ligationproductsusing isopropanolprecipitation.Weelectroporated the concentrated ligation productwith Endura cells (LGCBiosearch 60242-2) in multiple transformations and then pooled together and plated on square 245 × 245mmBioAssay plates (Corning 431111) with LB / agar 100 ug/mlCarbenicillin.Usingdilutionplating,wemeasureda representation of 500 colonies per gRNA. .. The bacteria were harvested after 14 h of incubation at 37 °C, scrapedwith 5-10ml of LBmedia andprocessedwith a PlasmidPlusmaxi prep kit (Qiagen 12965).Weused 1maxi prep column per 0.25 g of bacteria.

other:

Article Title: Comprehensive dissection of cis-regulatory elements in a 2.8 Mb topologically associated domain in six human cancers.
Article Snippet: The bacteria were harvested after 14 h of incubation at 37 °C, scrapedwith 5-10ml of LBmedia andprocessedwith a PlasmidPlusmaxi prep kit (Qiagen 12965).Weused 1maxi prep column per 0.25 g of bacteria.



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