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Integragen sa bac microarray 3-k arrays
Bac Microarray 3 K Arrays, supplied by Integragen sa, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/bac+array/integrachip+genome+wide+bac+arrays/pm20130593-202-4-34
Average 90 stars, based on 1 article reviews
bac microarray 3-k arrays - by Bioz Stars, 2026-10
90/100 stars

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Related Articles

other:

Article Title: Alpha-Interferon Secreting Blastic Plasmacytoid Dendritic Cells Neoplasm
Article Snippet: We report a new case of blastic plasmacytoid dendritic cell neoplasm (BPDCN) with extensive immunophenoptyping, genotyping (karyotype, array-comparative genomic hybridization, and fluorescent in situ hybridization), and long-term tumor cells culture.. BPDCN is a very rare and aggressive disease clinically characterized by a skin revealing localization more or less rapidly disseminating to the bone marrow and other organs with or without and leukemia.. The disease was initially phenotypically characterized by the expression of both CD4 and CD56 antigens, whereas lymphoid and myeloid lineage antigens were negative.

Article Title: Specific chromosomal imbalances as detected by array CGH in ependymomas in association with tumor location, histological subtype and grade.
Article Snippet: Ependymomas are glial neoplasms originating from the wall of the ventricles or from the spinal canal.. The significance of histopathological features in accurately predicting biological behavior is still debated.. Moreover, key molecular events in the pathogenesis of ependymoma are yet to be defined.

Article Title: Homozygous FIBP nonsense variant responsible of syndromic overgrowth, with overgrowth, macrocephaly, retinal coloboma and learning disabilities.
Article Snippet: The acidic fibroblast growth factor (FGF) intracellular binding protein (FIBP) interacts directly with the fibroblast growth factor FGF1.. Although FIBP is known to be implicated in the FGF signaling pathway, its precise function remains unclear.. Gain-of-function variants in several FGF receptors (FGFRs) are implicated in a wide spectrum of growth disorders from achondroplasia to overgrowth syndromes.

Article Title: Polymicrogyria in a child with inv dup del(9p) and 22q11.2 microduplication.
Article Snippet: Polymicrogyria in a Child With inv dup del(9p) and 22q11.2 Microduplication A.L.. Mosca,* P. Callier, L. Faivre, N. Marle, N. Mejean, C. Thauvin-Robinet, A. Masurel-Paulet, N. Madinier, C. Durand, G. Couillaud, S. Ragot, F. Huet, J.R. Teyssier, and F. Mugneret D epartement de G en etique, CHU le Bocage, Dijon, France Service de Neuroradiologie, CHU le Bocage, Dijon, France Service de P ediatrie, CHU le Bocage, Dijon, France

BAC Assay:

Article Title: Genome-wide analysis of cutaneous T-cell lymphomas identifies three clinically relevant classes.
Article Snippet: .. Array-CGH was performed on BAC microarray consisting of 3,113 BAC clones (called 3-K arrays in latter parts) (Integrachip, Integra- Gen, Evry, France) or 5,600 BAC clones (called 5-K arrays in latter parts) (version7: V7, IntegraGen) that covered the human genome at a 0.5–1 Mb resolution. ..

Article Title: Recurrent genomic instability of chromosome 1q in neural derivatives of human embryonic stem cells
Article Snippet: .. IntegraChip genome-wide BAC arrays of 5,245 BAC clones (526-kb median spacing) were hybridized by the manufacturer (IntegraGen). ..

Article Title: SOX2 Is an Oncogene Activated by Recurrent 3q26.3 Amplifications in Human Lung Squamous Cell Carcinomas
Article Snippet: .. IntegraChipTM BAC pangenomic arrays (IntegraGen) were also used to analyze two tumors (#15 and 35). ..

Microarray:

Article Title: Genome-wide analysis of cutaneous T-cell lymphomas identifies three clinically relevant classes.
Article Snippet: .. Array-CGH was performed on BAC microarray consisting of 3,113 BAC clones (called 3-K arrays in latter parts) (Integrachip, Integra- Gen, Evry, France) or 5,600 BAC clones (called 5-K arrays in latter parts) (version7: V7, IntegraGen) that covered the human genome at a 0.5–1 Mb resolution. ..

Clone Assay:

Article Title: Genome-wide analysis of cutaneous T-cell lymphomas identifies three clinically relevant classes.
Article Snippet: .. Array-CGH was performed on BAC microarray consisting of 3,113 BAC clones (called 3-K arrays in latter parts) (Integrachip, Integra- Gen, Evry, France) or 5,600 BAC clones (called 5-K arrays in latter parts) (version7: V7, IntegraGen) that covered the human genome at a 0.5–1 Mb resolution. ..

Article Title: Clinical and pathophysiological implications of chromosomal alterations in adrenocortical tumors: an integrated genomic approach.
Article Snippet: .. IntegraChip bacterial artificial chromosome pangenomic arrays (IntegraGen, Evry, France) were used, covering the genome with 4434 bacterial artificial chromosome clones, with a median distance of 600 kb between clones. .. Tumor DNA (500 – 600 ng) was labeled by random priming with Cy5 (Bioprime labeling kit; Invitrogen, Carlsbad, CA) and then mixed to Cy3 control DNA matched for gender.

Article Title: Recurrent genomic instability of chromosome 1q in neural derivatives of human embryonic stem cells
Article Snippet: .. IntegraChip genome-wide BAC arrays of 5,245 BAC clones (526-kb median spacing) were hybridized by the manufacturer (IntegraGen). ..

Genome Wide:

Article Title: Recurrent genomic instability of chromosome 1q in neural derivatives of human embryonic stem cells
Article Snippet: .. IntegraChip genome-wide BAC arrays of 5,245 BAC clones (526-kb median spacing) were hybridized by the manufacturer (IntegraGen). ..



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CGH using the <t>chromosome</t> <t>7</t> (Ch7) BAC tile-path array, Agilent 244A oligonucleotide array platform and chromosome 7 gene resolution oligonucleotide array maps the MDR to a 2.8 Mb region at 7q32 (Panel A). As shown by Affymetrix gene expression analyses, the genes on 7q, particularly those within the MDR are significantly under-expressed in SMZL with 7q deletion than those without the deletion. Panel B shows the genes significantly differentially expressed between SMZL with and without 7q deletion according to P values, while Panel C displays those with further fold change more than 1.25×SD (standard deviation).
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CGH using the <t>chromosome</t> <t>7</t> (Ch7) BAC tile-path array, Agilent 244A oligonucleotide array platform and chromosome 7 gene resolution oligonucleotide array maps the MDR to a 2.8 Mb region at 7q32 (Panel A). As shown by Affymetrix gene expression analyses, the genes on 7q, particularly those within the MDR are significantly under-expressed in SMZL with 7q deletion than those without the deletion. Panel B shows the genes significantly differentially expressed between SMZL with and without 7q deletion according to P values, while Panel C displays those with further fold change more than 1.25×SD (standard deviation).
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CGH using the <t>chromosome</t> <t>7</t> (Ch7) BAC tile-path array, Agilent 244A oligonucleotide array platform and chromosome 7 gene resolution oligonucleotide array maps the MDR to a 2.8 Mb region at 7q32 (Panel A). As shown by Affymetrix gene expression analyses, the genes on 7q, particularly those within the MDR are significantly under-expressed in SMZL with 7q deletion than those without the deletion. Panel B shows the genes significantly differentially expressed between SMZL with and without 7q deletion according to P values, while Panel C displays those with further fold change more than 1.25×SD (standard deviation).
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Image Search Results


CGH using the chromosome 7 (Ch7) BAC tile-path array, Agilent 244A oligonucleotide array platform and chromosome 7 gene resolution oligonucleotide array maps the MDR to a 2.8 Mb region at 7q32 (Panel A). As shown by Affymetrix gene expression analyses, the genes on 7q, particularly those within the MDR are significantly under-expressed in SMZL with 7q deletion than those without the deletion. Panel B shows the genes significantly differentially expressed between SMZL with and without 7q deletion according to P values, while Panel C displays those with further fold change more than 1.25×SD (standard deviation).

Journal: PLoS ONE

Article Title: An Integrated Genomic and Expression Analysis of 7q Deletion in Splenic Marginal Zone Lymphoma

doi: 10.1371/journal.pone.0044997

Figure Lengend Snippet: CGH using the chromosome 7 (Ch7) BAC tile-path array, Agilent 244A oligonucleotide array platform and chromosome 7 gene resolution oligonucleotide array maps the MDR to a 2.8 Mb region at 7q32 (Panel A). As shown by Affymetrix gene expression analyses, the genes on 7q, particularly those within the MDR are significantly under-expressed in SMZL with 7q deletion than those without the deletion. Panel B shows the genes significantly differentially expressed between SMZL with and without 7q deletion according to P values, while Panel C displays those with further fold change more than 1.25×SD (standard deviation).

Article Snippet: summarised the 7q deletion in SMZL detected by CGH using a chromosome-7 BAC tile-path array (17 cases) and the Agilent aCGH 244A array CGH (10 cases) from our previous studies , .

Techniques: Expressing, Standard Deviation

Clinical cycle of comprehensive preimplantation genetic testing. The process starts with family genetic testing in order to establish normal and disease-associated family haplotypes. Next, oocyte stimulation, retrieval, and fertilization are performed. Embryos surviving until day 5 undergo laser-assisted hatching and biopsy. Biopsy material consisting of a few trophectoderm cells is amplified using one of the WGA techniques. WGA material is further used to assess the embryonic genome, including haplotype, causative variant, aneuploidy, and CNV analyses. The disease-free embryo is subjected to embryo transfer to the uterine cavity. The whole cycle can be repeated within 24 h, with a day-6 embryo being transferred. If the genetic testing takes longer, then embryos are vitrified and thawed before being transferred. PGT—preimplantation genetic testing, WGA—whole-genome amplification, IVF—in vitro fertilization, MPS—massively parallel sequencing, CNV—copy number variation.

Journal: International Journal of Molecular Sciences

Article Title: Whole Genome Amplification in Preimplantation Genetic Testing in the Era of Massively Parallel Sequencing

doi: 10.3390/ijms23094819

Figure Lengend Snippet: Clinical cycle of comprehensive preimplantation genetic testing. The process starts with family genetic testing in order to establish normal and disease-associated family haplotypes. Next, oocyte stimulation, retrieval, and fertilization are performed. Embryos surviving until day 5 undergo laser-assisted hatching and biopsy. Biopsy material consisting of a few trophectoderm cells is amplified using one of the WGA techniques. WGA material is further used to assess the embryonic genome, including haplotype, causative variant, aneuploidy, and CNV analyses. The disease-free embryo is subjected to embryo transfer to the uterine cavity. The whole cycle can be repeated within 24 h, with a day-6 embryo being transferred. If the genetic testing takes longer, then embryos are vitrified and thawed before being transferred. PGT—preimplantation genetic testing, WGA—whole-genome amplification, IVF—in vitro fertilization, MPS—massively parallel sequencing, CNV—copy number variation.

Article Snippet: PGT performed on trophectoderm biopsies using PicoPLEX in combination with BlueGnome’s BAC arrays (later Illumina, now discontinued) and subsequently MPS began a major revolution in the availability of human PGT and forever changed the face of clinical in vitro fertilization [ , , ].

Techniques: Amplification, Variant Assay, Whole Genome Amplification, In Vitro, Sequencing