Journal:

Article Title: Sequence-Based Identification of Aerobic Actinomycetes

doi: 10.1128/JCM.42.6.2530-2540.2004

Figure Lengend Snippet: ATCC reference strains used in this study

Article Snippet: 3 0.00 (2) G. bronchialis C2 AY262331 0.00 (1) G. sputi C3 AY262330 R. equi 5 0.00 (2) R. equi, C. hoagii 0.00 R. equi X80614 (490) D1 AY262301 0.20 (3) R. equi, C. hoagii D2 AY262300 S. albus ATCC 3004 T 1 0.10 i S. albus albus E1 AY262299 S. somaliensis ATCC 33201 T 1 0.00 i S. somaliensis 0.00 S. somaliensis AJ007403 (500) E2 AY262297 S. griseus 1 0.40 S. anulatus E3 AY262298 Streptomyces spp.

Techniques:

Journal:

Article Title: Sequence-Based Identification of Aerobic Actinomycetes

doi: 10.1128/JCM.42.6.2530-2540.2004

Figure Lengend Snippet: Database search results for Actinomadura spp., Gordona spp., Rhodococcus spp., Streptomyces spp., and Tsukamurella spp.

Article Snippet: 3 0.00 (2) G. bronchialis C2 AY262331 0.00 (1) G. sputi C3 AY262330 R. equi 5 0.00 (2) R. equi, C. hoagii 0.00 R. equi X80614 (490) D1 AY262301 0.20 (3) R. equi, C. hoagii D2 AY262300 S. albus ATCC 3004 T 1 0.10 i S. albus albus E1 AY262299 S. somaliensis ATCC 33201 T 1 0.00 i S. somaliensis 0.00 S. somaliensis AJ007403 (500) E2 AY262297 S. griseus 1 0.40 S. anulatus E3 AY262298 Streptomyces spp.

Techniques: Sequencing

Journal: Journal of Antimicrobial Chemotherapy

Article Title: Finafloxacin overcomes Burkholderia pseudomallei efflux-mediated fluoroquinolone resistance

doi: 10.1093/jac/dkw529

Figure Lengend Snippet: In vitro susceptibility of isogenic B. pseudomallei strains expressing or lacking defined efflux pumps

Article Snippet: Growth was visually inspected after 20 h of incubation at 37 °C. table ft1 table-wrap mode="anchored" t5 caption a7 Strain b Genotype Efflux pump(s) expressed MIC (mg/L) a ciprofloxacin moxifloxacin finafloxacin pH 5.8 pH 7.2 pH 5.8 pH 7.2 pH 5.8 pH 7.2 1026b amrA + B + -oprA + bpeA + B + -oprB + bpeE + F + -oprC + AmrAB-OprA→ c BpeAB-OprB→ 64 2 16 2 0.125 0.25 Bp340 Δ( amrRAB-oprA ) BpeAB-OprB→ 32 2 16 1 0.25 2 d Bp227 Δ( bpeAB-oprB ) AmrAB-OprA→ 16 0.5 8 0.5 0.0625 0.0625 Bp207 Δ( amrRAB-oprA ) Δ( bpeAB-oprB ) none known e 4 0.25 2 0.125 0.03125 0.03125 Bp58 Δ bpeR Δ( amrRAB-oprA ) BpeAB-OprB↑ 128 4 64 4 0.5 4 Bp282 Δ( amrRAB-oprA ) Δ( bpeAB-oprB ) bpeT BpeEF-OprC↑ 128 32 128 16 2 2 Bp320 Δ( amrRAB-oprA ) Δ( bpeAB-oprB ) Δ( bpeEF-oprC ) bpeT none known 0.125 0.0625 0.25 0.125 ≤0.0078125 ≤0.0078125 E. coli ATCC 25922 N/A 0.25 0.03125 0.5 0.125 ≤0.0078125 0.015625 Open in a separate window N/A, not available. a MIC testing for each strain was performed in biological triplicate on three separate days.

Techniques: In Vitro, Expressing

Journal: MycoKeys

Article Title: The Ganoderma weberianum - resinaceum lineage: multilocus phylogenetic analysis and morphology confirm G. mexicanum and G. parvulum in the Neotropics

doi: 10.3897/mycokeys.59.33182

Figure Lengend Snippet: DNA sequences of Ganoderma weberianum resinaceum complex and outgroup used in this study, with their voucher materials and geographic origin.

Article Snippet: Phylogenetic analyses inferred from an ITS data set ( ) or a combined ITS–LSU data set ( ) also showed that G. subamboinense var. laevisporum (ITS sequence from the ex-type culture ATCC 52419) and G. multiplicatum (that should be considered as sensu auctores ) formed two distinct clades, in two distant lineages.

Techniques:

Journal: MycoKeys

Article Title: The Ganoderma weberianum - resinaceum lineage: multilocus phylogenetic analysis and morphology confirm G. mexicanum and G. parvulum in the Neotropics

doi: 10.3897/mycokeys.59.33182

Figure Lengend Snippet: Morphological features and microscopic structures of Ganoderma mexicanum A–F J.P. Fiard SW 17 (as G. subamboinense in ) A pileus and context not fully homogeneous with discrete bodies of the resin-like deposits (arrow) B cuticular cells C basidiospores with free to subfree pillars D–F smooth-walled chlamydospores D from context E from culture, in cotton blue F from culture, in Melzer reagent G–I BAFC 25525 (as G. subamboinense var. laevisporum , holotype) G cuticular cells H basidiospores with free to subfree pillars I smooth-walled chlamydospore from context.

Article Snippet: Phylogenetic analyses inferred from an ITS data set ( ) or a combined ITS–LSU data set ( ) also showed that G. subamboinense var. laevisporum (ITS sequence from the ex-type culture ATCC 52419) and G. multiplicatum (that should be considered as sensu auctores ) formed two distinct clades, in two distant lineages.

Techniques: