vsg2 Search Results


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Sony graphics system crs vsg2/5
Graphics System Crs Vsg2/5, supplied by Sony, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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BioResource International Inc mouse anti-vsg2 antibody
VSG RNA levels in WT and KO mutants were analyzed by rRNA-depleted stranded RNA-seq. RNA-seq reads were aligned to the VSGnome database and LOG2(RPKM) values were obtained for each VSG in wild type and KO mutants. (A) Four types of VSG loci in the genome. BES VSG (telomeric, polycistronically transcribed by RNA pol I), MES VSG (telomeric, monicistronically transcribed by RNA pol I), and MC VSG (telomeric, no promoter). Chromosome-internal VSG in arrays. (B) Heat map comparison between WT and KO mutants for BES and MES VSG expression levels (darker color = higher expression levels). Shown: silent VSGs (red) and active <t>VSG2</t> (green). (C) Bar graphs comparing WT and KO mutants for BES and MES VSG expression levels. Mutants are grouped by the loss of VSG silencing phenotype: mutants that showed no change (top) and mutants that increased the expression of silent VSGs (bottom). Error bars indicate standard deviation between three replicates. (D) Box plot comparing WT and KO mutants for MC VSG expression levels. (E) Box plot comparing WT and KO mutants for chromosome internal VSG expression levels. Statistically analyses are summarized in Supplementary Table 9.
Mouse Anti Vsg2 Antibody, supplied by BioResource International Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/vsg2/mouse+anti+vsg2+antibody/bio_rxiv__2021__05__13__444086-310-7-12
Average 90 stars, based on 1 article reviews
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The Matworks Company LLC vsg2/5 (vsl v8
VSG RNA levels in WT and KO mutants were analyzed by rRNA-depleted stranded RNA-seq. RNA-seq reads were aligned to the VSGnome database and LOG2(RPKM) values were obtained for each VSG in wild type and KO mutants. (A) Four types of VSG loci in the genome. BES VSG (telomeric, polycistronically transcribed by RNA pol I), MES VSG (telomeric, monicistronically transcribed by RNA pol I), and MC VSG (telomeric, no promoter). Chromosome-internal VSG in arrays. (B) Heat map comparison between WT and KO mutants for BES and MES VSG expression levels (darker color = higher expression levels). Shown: silent VSGs (red) and active <t>VSG2</t> (green). (C) Bar graphs comparing WT and KO mutants for BES and MES VSG expression levels. Mutants are grouped by the loss of VSG silencing phenotype: mutants that showed no change (top) and mutants that increased the expression of silent VSGs (bottom). Error bars indicate standard deviation between three replicates. (D) Box plot comparing WT and KO mutants for MC VSG expression levels. (E) Box plot comparing WT and KO mutants for chromosome internal VSG expression levels. Statistically analyses are summarized in Supplementary Table 9.
Vsg2/5 (Vsl V8, supplied by The Matworks Company LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/vsg2/vsg2+5++vsl+v8/bio_rxiv__2020__03__26__010017-290-9-15
Average 90 stars, based on 1 article reviews
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86
Cambridge Research Systems vsg2 3 graphics card
VSG RNA levels in WT and KO mutants were analyzed by rRNA-depleted stranded RNA-seq. RNA-seq reads were aligned to the VSGnome database and LOG2(RPKM) values were obtained for each VSG in wild type and KO mutants. (A) Four types of VSG loci in the genome. BES VSG (telomeric, polycistronically transcribed by RNA pol I), MES VSG (telomeric, monicistronically transcribed by RNA pol I), and MC VSG (telomeric, no promoter). Chromosome-internal VSG in arrays. (B) Heat map comparison between WT and KO mutants for BES and MES VSG expression levels (darker color = higher expression levels). Shown: silent VSGs (red) and active <t>VSG2</t> (green). (C) Bar graphs comparing WT and KO mutants for BES and MES VSG expression levels. Mutants are grouped by the loss of VSG silencing phenotype: mutants that showed no change (top) and mutants that increased the expression of silent VSGs (bottom). Error bars indicate standard deviation between three replicates. (D) Box plot comparing WT and KO mutants for MC VSG expression levels. (E) Box plot comparing WT and KO mutants for chromosome internal VSG expression levels. Statistically analyses are summarized in Supplementary Table 9.
Vsg2 3 Graphics Card, supplied by Cambridge Research Systems, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


VSG RNA levels in WT and KO mutants were analyzed by rRNA-depleted stranded RNA-seq. RNA-seq reads were aligned to the VSGnome database and LOG2(RPKM) values were obtained for each VSG in wild type and KO mutants. (A) Four types of VSG loci in the genome. BES VSG (telomeric, polycistronically transcribed by RNA pol I), MES VSG (telomeric, monicistronically transcribed by RNA pol I), and MC VSG (telomeric, no promoter). Chromosome-internal VSG in arrays. (B) Heat map comparison between WT and KO mutants for BES and MES VSG expression levels (darker color = higher expression levels). Shown: silent VSGs (red) and active VSG2 (green). (C) Bar graphs comparing WT and KO mutants for BES and MES VSG expression levels. Mutants are grouped by the loss of VSG silencing phenotype: mutants that showed no change (top) and mutants that increased the expression of silent VSGs (bottom). Error bars indicate standard deviation between three replicates. (D) Box plot comparing WT and KO mutants for MC VSG expression levels. (E) Box plot comparing WT and KO mutants for chromosome internal VSG expression levels. Statistically analyses are summarized in Supplementary Table 9.

Journal: bioRxiv

Article Title: Site-specific epigenetic marks in Trypanosoma brucei transcription termination, antigenic variation, and proliferation

doi: 10.1101/2021.05.13.444086

Figure Lengend Snippet: VSG RNA levels in WT and KO mutants were analyzed by rRNA-depleted stranded RNA-seq. RNA-seq reads were aligned to the VSGnome database and LOG2(RPKM) values were obtained for each VSG in wild type and KO mutants. (A) Four types of VSG loci in the genome. BES VSG (telomeric, polycistronically transcribed by RNA pol I), MES VSG (telomeric, monicistronically transcribed by RNA pol I), and MC VSG (telomeric, no promoter). Chromosome-internal VSG in arrays. (B) Heat map comparison between WT and KO mutants for BES and MES VSG expression levels (darker color = higher expression levels). Shown: silent VSGs (red) and active VSG2 (green). (C) Bar graphs comparing WT and KO mutants for BES and MES VSG expression levels. Mutants are grouped by the loss of VSG silencing phenotype: mutants that showed no change (top) and mutants that increased the expression of silent VSGs (bottom). Error bars indicate standard deviation between three replicates. (D) Box plot comparing WT and KO mutants for MC VSG expression levels. (E) Box plot comparing WT and KO mutants for chromosome internal VSG expression levels. Statistically analyses are summarized in Supplementary Table 9.

Article Snippet: 6 million live cells were stained with mouse anti-VSG2 antibody (Antibody & Bioresource Core Facility, MSKCC) conjugated with Dylight 488 (Abcam) and mouse anti-VSG3 antibody (Antibody & Bioresource Core Facility, MSKCC) conjugated with Dylight 650 (Abcam).

Techniques: RNA Sequencing Assay, Expressing, Standard Deviation