transcriptome libraries Search Results


surecell wta 3 library prep kit for the ddseq system  (Illumina Inc)
93
Illumina Inc surecell wta 3 library prep kit for the ddseq system
KEY RESOURCES TABLE
Surecell Wta 3 Library Prep Kit For The Ddseq System, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/surecell wta 3 library prep kit for the ddseq system/product/Illumina Inc
Average 93 stars, based on 1 article reviews
surecell wta 3 library prep kit for the ddseq system - by Bioz Stars, 2026-06
93/100 stars
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annotated transcriptome assembly  (LabArchives LLC)
90
LabArchives LLC annotated transcriptome assembly
(A) The length distribution of the reads is shown in a gray histogram. Bins of the histogram have been set to 50 nucleotides. The lengths of the reads range from 40 to 631, with a median length of 387 and a mean length of 352. The reads represents a total of 426,683,712 nucleotides bases. (B) The length distribution of the 111,796 singletons is shown in a red histogram while the length distribution of the 62,482 contigs is shown in a blue histogram. Bins of the histograms have been set to 25 nucleotides. The lengths of the singleton sequences range from 50 to 614, with a median length of 187 and a mean length of 265. The lengths of the contig sequences range from 50 to 4,054, with a median length of 473 and a mean length of 487. Our Syrian hamster <t>transcriptome</t> represents a total of 60,117,204 nucleotides bases.
Annotated Transcriptome Assembly, supplied by LabArchives LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/annotated transcriptome assembly/product/LabArchives LLC
Average 90 stars, based on 1 article reviews
annotated transcriptome assembly - by Bioz Stars, 2026-06
90/100 stars
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bwa -aligned cram files (hg38) produced by the gatk best practices workflow  (Broad Institute Inc)
90
Broad Institute Inc bwa -aligned cram files (hg38) produced by the gatk best practices workflow
(A) The length distribution of the reads is shown in a gray histogram. Bins of the histogram have been set to 50 nucleotides. The lengths of the reads range from 40 to 631, with a median length of 387 and a mean length of 352. The reads represents a total of 426,683,712 nucleotides bases. (B) The length distribution of the 111,796 singletons is shown in a red histogram while the length distribution of the 62,482 contigs is shown in a blue histogram. Bins of the histograms have been set to 25 nucleotides. The lengths of the singleton sequences range from 50 to 614, with a median length of 187 and a mean length of 265. The lengths of the contig sequences range from 50 to 4,054, with a median length of 473 and a mean length of 487. Our Syrian hamster <t>transcriptome</t> represents a total of 60,117,204 nucleotides bases.
Bwa Aligned Cram Files (Hg38) Produced By The Gatk Best Practices Workflow, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bwa -aligned cram files (hg38) produced by the gatk best practices workflow/product/Broad Institute Inc
Average 90 stars, based on 1 article reviews
bwa -aligned cram files (hg38) produced by the gatk best practices workflow - by Bioz Stars, 2026-06
90/100 stars
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rna-seq library preparation kit whole transcriptome discovery  (Gnomegen Inc)
90
Gnomegen Inc rna-seq library preparation kit whole transcriptome discovery
(A) The length distribution of the reads is shown in a gray histogram. Bins of the histogram have been set to 50 nucleotides. The lengths of the reads range from 40 to 631, with a median length of 387 and a mean length of 352. The reads represents a total of 426,683,712 nucleotides bases. (B) The length distribution of the 111,796 singletons is shown in a red histogram while the length distribution of the 62,482 contigs is shown in a blue histogram. Bins of the histograms have been set to 25 nucleotides. The lengths of the singleton sequences range from 50 to 614, with a median length of 187 and a mean length of 265. The lengths of the contig sequences range from 50 to 4,054, with a median length of 473 and a mean length of 487. Our Syrian hamster <t>transcriptome</t> represents a total of 60,117,204 nucleotides bases.
Rna Seq Library Preparation Kit Whole Transcriptome Discovery, supplied by Gnomegen Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/rna-seq library preparation kit whole transcriptome discovery/product/Gnomegen Inc
Average 90 stars, based on 1 article reviews
rna-seq library preparation kit whole transcriptome discovery - by Bioz Stars, 2026-06
90/100 stars
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transcriptome library  (BGI Shenzhen)
90
BGI Shenzhen transcriptome library
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Transcriptome Library, supplied by BGI Shenzhen, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcriptome library/product/BGI Shenzhen
Average 90 stars, based on 1 article reviews
transcriptome library - by Bioz Stars, 2026-06
90/100 stars
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rhapsody whole transcriptome analysis library preparation kit  (Becton Dickinson)
90
Becton Dickinson rhapsody whole transcriptome analysis library preparation kit
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Rhapsody Whole Transcriptome Analysis Library Preparation Kit, supplied by Becton Dickinson, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/rhapsody whole transcriptome analysis library preparation kit/product/Becton Dickinson
Average 90 stars, based on 1 article reviews
rhapsody whole transcriptome analysis library preparation kit - by Bioz Stars, 2026-06
90/100 stars
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rna-seq transcriptome library  (Microsynth ag)
90
Microsynth ag rna-seq transcriptome library
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Rna Seq Transcriptome Library, supplied by Microsynth ag, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/rna-seq transcriptome library/product/Microsynth ag
Average 90 stars, based on 1 article reviews
rna-seq transcriptome library - by Bioz Stars, 2026-06
90/100 stars
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cdna library preparation, sequencing, and transcriptome assembly  (GATC Biotech)
90
GATC Biotech cdna library preparation, sequencing, and transcriptome assembly
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Cdna Library Preparation, Sequencing, And Transcriptome Assembly, supplied by GATC Biotech, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/cdna library preparation, sequencing, and transcriptome assembly/product/GATC Biotech
Average 90 stars, based on 1 article reviews
cdna library preparation, sequencing, and transcriptome assembly - by Bioz Stars, 2026-06
90/100 stars
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rna library construction and transcriptomic sequencing  (LGC Genomics GmbH)
90
LGC Genomics GmbH rna library construction and transcriptomic sequencing
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Rna Library Construction And Transcriptomic Sequencing, supplied by LGC Genomics GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/rna library construction and transcriptomic sequencing/product/LGC Genomics GmbH
Average 90 stars, based on 1 article reviews
rna library construction and transcriptomic sequencing - by Bioz Stars, 2026-06
90/100 stars
  Buy from Supplier
transcriptomic libraries  (Johns Hopkins HealthCare)
90
Johns Hopkins HealthCare transcriptomic libraries
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Transcriptomic Libraries, supplied by Johns Hopkins HealthCare, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcriptomic libraries/product/Johns Hopkins HealthCare
Average 90 stars, based on 1 article reviews
transcriptomic libraries - by Bioz Stars, 2026-06
90/100 stars
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transcriptome library  (Microsynth ag)
90
Microsynth ag transcriptome library
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Transcriptome Library, supplied by Microsynth ag, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcriptome library/product/Microsynth ag
Average 90 stars, based on 1 article reviews
transcriptome library - by Bioz Stars, 2026-06
90/100 stars
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transcriptome and expression profiling libraries  (KeyGene Inc)
90
KeyGene Inc transcriptome and expression profiling libraries
<t>Transcriptome</t> analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.
Transcriptome And Expression Profiling Libraries, supplied by KeyGene Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcriptome and expression profiling libraries/product/KeyGene Inc
Average 90 stars, based on 1 article reviews
transcriptome and expression profiling libraries - by Bioz Stars, 2026-06
90/100 stars
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Image Search Results


KEY RESOURCES TABLE

Journal: Immunity

Article Title: The cytokine TNF promotes transcription factor SREBP activity and binding to inflammatory genes to activate macrophages and limit tissue repair

doi: 10.1016/j.immuni.2019.06.005

Figure Lengend Snippet: KEY RESOURCES TABLE

Article Snippet: SureCell WTA 3′ Library Prep Kit for the ddSeq System , Illumina , Cat# 200142780.

Techniques: Purification, Control, Virus, Plasmid Preparation, Recombinant, Amplex Red Cholesterol Assay, cDNA Synthesis, SYBR Green Assay, Multiplex Assay, RNA Library Preparation, Microarray, Software

(A) The length distribution of the reads is shown in a gray histogram. Bins of the histogram have been set to 50 nucleotides. The lengths of the reads range from 40 to 631, with a median length of 387 and a mean length of 352. The reads represents a total of 426,683,712 nucleotides bases. (B) The length distribution of the 111,796 singletons is shown in a red histogram while the length distribution of the 62,482 contigs is shown in a blue histogram. Bins of the histograms have been set to 25 nucleotides. The lengths of the singleton sequences range from 50 to 614, with a median length of 187 and a mean length of 265. The lengths of the contig sequences range from 50 to 4,054, with a median length of 473 and a mean length of 487. Our Syrian hamster transcriptome represents a total of 60,117,204 nucleotides bases.

Journal: PLoS ONE

Article Title: Sequencing, Annotation and Analysis of the Syrian Hamster ( Mesocricetus auratus ) Transcriptome

doi: 10.1371/journal.pone.0112617

Figure Lengend Snippet: (A) The length distribution of the reads is shown in a gray histogram. Bins of the histogram have been set to 50 nucleotides. The lengths of the reads range from 40 to 631, with a median length of 387 and a mean length of 352. The reads represents a total of 426,683,712 nucleotides bases. (B) The length distribution of the 111,796 singletons is shown in a red histogram while the length distribution of the 62,482 contigs is shown in a blue histogram. Bins of the histograms have been set to 25 nucleotides. The lengths of the singleton sequences range from 50 to 614, with a median length of 187 and a mean length of 265. The lengths of the contig sequences range from 50 to 4,054, with a median length of 473 and a mean length of 487. Our Syrian hamster transcriptome represents a total of 60,117,204 nucleotides bases.

Article Snippet: Moreover, we released the annotated transcriptome assembly in LabArchives ( http://www.labarchives.com/ ) and are available via the DOI http://dx.doi.org/10.6070/H4FQ9TKP .

Techniques:

Transcriptome references and alignment statistics.

Journal: PLoS ONE

Article Title: Sequencing, Annotation and Analysis of the Syrian Hamster ( Mesocricetus auratus ) Transcriptome

doi: 10.1371/journal.pone.0112617

Figure Lengend Snippet: Transcriptome references and alignment statistics.

Article Snippet: Moreover, we released the annotated transcriptome assembly in LabArchives ( http://www.labarchives.com/ ) and are available via the DOI http://dx.doi.org/10.6070/H4FQ9TKP .

Techniques:

Functional enrichment of the mouse genes mapped by our transcriptome assembly.

Journal: PLoS ONE

Article Title: Sequencing, Annotation and Analysis of the Syrian Hamster ( Mesocricetus auratus ) Transcriptome

doi: 10.1371/journal.pone.0112617

Figure Lengend Snippet: Functional enrichment of the mouse genes mapped by our transcriptome assembly.

Article Snippet: Moreover, we released the annotated transcriptome assembly in LabArchives ( http://www.labarchives.com/ ) and are available via the DOI http://dx.doi.org/10.6070/H4FQ9TKP .

Techniques: Functional Assay, Ubiquitin Proteomics

(A) Distogram showing the number of transcripts commonly mapped by the Syrian hamster transcriptome between the different species used in this study. Each cell of the distogram represents the number of transcripts commonly mapped by two different species using a gradient color. (B) Phylogenetic tree showing the genomic divergence between a subset of the different species used in this study. Each leaf of the tree represents a different species and the distances of the edges are proportional to the genomic distances between the species. Genomic distances have been calculated based on the list of 611 Syrian hamster contigs and singletons that have been commonly aligned on the transcriptome references of the 13 species having the highest number of commonly aligned sequences.

Journal: PLoS ONE

Article Title: Sequencing, Annotation and Analysis of the Syrian Hamster ( Mesocricetus auratus ) Transcriptome

doi: 10.1371/journal.pone.0112617

Figure Lengend Snippet: (A) Distogram showing the number of transcripts commonly mapped by the Syrian hamster transcriptome between the different species used in this study. Each cell of the distogram represents the number of transcripts commonly mapped by two different species using a gradient color. (B) Phylogenetic tree showing the genomic divergence between a subset of the different species used in this study. Each leaf of the tree represents a different species and the distances of the edges are proportional to the genomic distances between the species. Genomic distances have been calculated based on the list of 611 Syrian hamster contigs and singletons that have been commonly aligned on the transcriptome references of the 13 species having the highest number of commonly aligned sequences.

Article Snippet: Moreover, we released the annotated transcriptome assembly in LabArchives ( http://www.labarchives.com/ ) and are available via the DOI http://dx.doi.org/10.6070/H4FQ9TKP .

Techniques:

Transcriptome analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.

Journal: Theranostics

Article Title: A strategy of local hydrogen capture and catalytic hydrogenation for enhanced therapy of chronic liver diseases

doi: 10.7150/thno.80494

Figure Lengend Snippet: Transcriptome analysis of liver samples. The Venn diagram of the DEGs in various comparisons ( A ), the KEGG enrichment analysis of the 43 genes clustered in the Venn diagram ( B ), the KEGG enrichment analysis of all the DEGs in comparison of H 2 +PdH and H 2 groups (Log 2 |fold change| > 0, p value < 0.05) ( C ), the heatmap of DEGs in enriched pathways in comparison of H 2 +PdH and H 2 groups ( D ), mRNA expression levels of TNF-α, IL-6 and IL-1β in liver tissues examined by real-time qPCR ( E ). Data were presented as mean ± standard deviation (Mean ± SD) with individual data. Student t -test was applied for comparison between groups. Difference was considered significant using asterisk as follows: * p < 0.05, ** p < 0.01, *** p < 0.001.

Article Snippet: All the RNAs were extracted, and transcriptome library was constructed at BGI-Shenzhen.

Techniques: Comparison, Expressing, Standard Deviation