tom_deconv Search Results


90
MathWorks Inc tom_deconv
Tom Deconv, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tom_deconv/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
tom_deconv - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
MathWorks Inc matlab script tom_decov
Matlab Script Tom Decov, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab script tom_decov/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab script tom_decov - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
MathWorks Inc matlab-based scripts
Matlab Based Scripts, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/matlab-based scripts/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
matlab-based scripts - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
MathWorks Inc tom_deconv function
Tom Deconv Function, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tom_deconv function/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
tom_deconv function - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
MathWorks Inc tom_deconv deconvolution filter
Tom Deconv Deconvolution Filter, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tom_deconv deconvolution filter/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
tom_deconv deconvolution filter - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
MathWorks Inc wiener-like deconvolution filter implemented in warp
Wiener Like Deconvolution Filter Implemented In Warp, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/wiener-like deconvolution filter implemented in warp/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
wiener-like deconvolution filter implemented in warp - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
MathWorks Inc deconvolution filter
cER Peaks and PM Integrity in Heat-Shocked Tcb3 Truncation Mutants (A–C) 1.4-nm-thick tomographic slices of cER in the indicated strains (left) and 3D renderings of cER curvature (right). Agg: aggregate; cER: cortical ER; Mito: mitochondrion; Nuc: nucleus; PM: plasma membrane. (A) tcb3Δ + Tcb3-GFP HS, (B) tcb3Δ + Tcb3 SMPΔ- GFP HS, (C) tcb3Δ + Tcb3 C2Δ-GFP HS. Insets show cER peaks (blue arrowhead in the tomographic slice inset). Scale bars for tomographic slices: 300 nm (main panels); 25 nm (insets). The contrast of the tomographic slices in (A), (B), and (C) was enhanced using a <t>deconvolution</t> filter. (D) cER peak density per μm 2 of cER membrane area showing average values (gray bars) ± SE (error bars). N = 7 (WT HS), 3 ( tcb3Δ + Tcb3-GFP HS), 3 ( tcb3Δ + Tcb3 SMPΔ-GFP HS), and 3 ( tcb3Δ + Tcb3 C2Δ-GFP HS) ER-PM MCS. n.s. indicates p > 0.05 by Mann-Whitney U test. (E) PM integrity assay of tcb3Δ cells complemented with Tcb3 truncation mutants upon 10-min incubation at 42°C. The plot shows average values (white/gray bars) for each condition ± SE (error bars). n.s., ∗ , ∗∗ , and ∗∗∗ , respectively, indicate p > 0.05, p < 0.05, p < 0.01, and p < 0.001 by unpaired t test. Four independent biological repeats were performed for all conditions. (F) Model for the function of cER peaks in maintaining PM integrity. In WT cells, Tcbs generate membrane peaks of extreme curvature on the cER membrane. This may facilitate the extraction of cER lipids and their delivery to the PM (top left). The generation of cER peaks is the main structural role of Tcbs at ER-PM MCS, as overall ER-PM tethering is not substantially affected by Tcb1/2/3 deletion. However, tcb1/2/3Δ cells lack cER peaks (bottom left). Under heat stress, influx of extracellular Ca 2+ through a damaged PM drives the localized formation of additional Tcb-mediated cER peaks, which in turn facilitate sufficient delivery of cER lipids to the PM to maintain PM integrity (top right). Absence of cER peaks in heat stressed tcb1/2/3Δ cells leads to PM integrity defects allowing influx of propidium iodide (bottom right). See also <xref ref-type=Figure S4 ; . " width="250" height="auto" />
Deconvolution Filter, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/deconvolution filter/product/MathWorks Inc
Average 90 stars, based on 1 article reviews
deconvolution filter - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

90
Thermo Fisher tom_deconv
cER Peaks and PM Integrity in Heat-Shocked Tcb3 Truncation Mutants (A–C) 1.4-nm-thick tomographic slices of cER in the indicated strains (left) and 3D renderings of cER curvature (right). Agg: aggregate; cER: cortical ER; Mito: mitochondrion; Nuc: nucleus; PM: plasma membrane. (A) tcb3Δ + Tcb3-GFP HS, (B) tcb3Δ + Tcb3 SMPΔ- GFP HS, (C) tcb3Δ + Tcb3 C2Δ-GFP HS. Insets show cER peaks (blue arrowhead in the tomographic slice inset). Scale bars for tomographic slices: 300 nm (main panels); 25 nm (insets). The contrast of the tomographic slices in (A), (B), and (C) was enhanced using a <t>deconvolution</t> filter. (D) cER peak density per μm 2 of cER membrane area showing average values (gray bars) ± SE (error bars). N = 7 (WT HS), 3 ( tcb3Δ + Tcb3-GFP HS), 3 ( tcb3Δ + Tcb3 SMPΔ-GFP HS), and 3 ( tcb3Δ + Tcb3 C2Δ-GFP HS) ER-PM MCS. n.s. indicates p > 0.05 by Mann-Whitney U test. (E) PM integrity assay of tcb3Δ cells complemented with Tcb3 truncation mutants upon 10-min incubation at 42°C. The plot shows average values (white/gray bars) for each condition ± SE (error bars). n.s., ∗ , ∗∗ , and ∗∗∗ , respectively, indicate p > 0.05, p < 0.05, p < 0.01, and p < 0.001 by unpaired t test. Four independent biological repeats were performed for all conditions. (F) Model for the function of cER peaks in maintaining PM integrity. In WT cells, Tcbs generate membrane peaks of extreme curvature on the cER membrane. This may facilitate the extraction of cER lipids and their delivery to the PM (top left). The generation of cER peaks is the main structural role of Tcbs at ER-PM MCS, as overall ER-PM tethering is not substantially affected by Tcb1/2/3 deletion. However, tcb1/2/3Δ cells lack cER peaks (bottom left). Under heat stress, influx of extracellular Ca 2+ through a damaged PM drives the localized formation of additional Tcb-mediated cER peaks, which in turn facilitate sufficient delivery of cER lipids to the PM to maintain PM integrity (top right). Absence of cER peaks in heat stressed tcb1/2/3Δ cells leads to PM integrity defects allowing influx of propidium iodide (bottom right). See also <xref ref-type=Figure S4 ; . " width="250" height="auto" />
Tom Deconv, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/tom_deconv/product/Thermo Fisher
Average 90 stars, based on 1 article reviews
tom_deconv - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


cER Peaks and PM Integrity in Heat-Shocked Tcb3 Truncation Mutants (A–C) 1.4-nm-thick tomographic slices of cER in the indicated strains (left) and 3D renderings of cER curvature (right). Agg: aggregate; cER: cortical ER; Mito: mitochondrion; Nuc: nucleus; PM: plasma membrane. (A) tcb3Δ + Tcb3-GFP HS, (B) tcb3Δ + Tcb3 SMPΔ- GFP HS, (C) tcb3Δ + Tcb3 C2Δ-GFP HS. Insets show cER peaks (blue arrowhead in the tomographic slice inset). Scale bars for tomographic slices: 300 nm (main panels); 25 nm (insets). The contrast of the tomographic slices in (A), (B), and (C) was enhanced using a deconvolution filter. (D) cER peak density per μm 2 of cER membrane area showing average values (gray bars) ± SE (error bars). N = 7 (WT HS), 3 ( tcb3Δ + Tcb3-GFP HS), 3 ( tcb3Δ + Tcb3 SMPΔ-GFP HS), and 3 ( tcb3Δ + Tcb3 C2Δ-GFP HS) ER-PM MCS. n.s. indicates p > 0.05 by Mann-Whitney U test. (E) PM integrity assay of tcb3Δ cells complemented with Tcb3 truncation mutants upon 10-min incubation at 42°C. The plot shows average values (white/gray bars) for each condition ± SE (error bars). n.s., ∗ , ∗∗ , and ∗∗∗ , respectively, indicate p > 0.05, p < 0.05, p < 0.01, and p < 0.001 by unpaired t test. Four independent biological repeats were performed for all conditions. (F) Model for the function of cER peaks in maintaining PM integrity. In WT cells, Tcbs generate membrane peaks of extreme curvature on the cER membrane. This may facilitate the extraction of cER lipids and their delivery to the PM (top left). The generation of cER peaks is the main structural role of Tcbs at ER-PM MCS, as overall ER-PM tethering is not substantially affected by Tcb1/2/3 deletion. However, tcb1/2/3Δ cells lack cER peaks (bottom left). Under heat stress, influx of extracellular Ca 2+ through a damaged PM drives the localized formation of additional Tcb-mediated cER peaks, which in turn facilitate sufficient delivery of cER lipids to the PM to maintain PM integrity (top right). Absence of cER peaks in heat stressed tcb1/2/3Δ cells leads to PM integrity defects allowing influx of propidium iodide (bottom right). See also <xref ref-type=Figure S4 ; . " width="100%" height="100%">

Journal: Developmental Cell

Article Title: Tricalbin-Mediated Contact Sites Control ER Curvature to Maintain Plasma Membrane Integrity

doi: 10.1016/j.devcel.2019.10.018

Figure Lengend Snippet: cER Peaks and PM Integrity in Heat-Shocked Tcb3 Truncation Mutants (A–C) 1.4-nm-thick tomographic slices of cER in the indicated strains (left) and 3D renderings of cER curvature (right). Agg: aggregate; cER: cortical ER; Mito: mitochondrion; Nuc: nucleus; PM: plasma membrane. (A) tcb3Δ + Tcb3-GFP HS, (B) tcb3Δ + Tcb3 SMPΔ- GFP HS, (C) tcb3Δ + Tcb3 C2Δ-GFP HS. Insets show cER peaks (blue arrowhead in the tomographic slice inset). Scale bars for tomographic slices: 300 nm (main panels); 25 nm (insets). The contrast of the tomographic slices in (A), (B), and (C) was enhanced using a deconvolution filter. (D) cER peak density per μm 2 of cER membrane area showing average values (gray bars) ± SE (error bars). N = 7 (WT HS), 3 ( tcb3Δ + Tcb3-GFP HS), 3 ( tcb3Δ + Tcb3 SMPΔ-GFP HS), and 3 ( tcb3Δ + Tcb3 C2Δ-GFP HS) ER-PM MCS. n.s. indicates p > 0.05 by Mann-Whitney U test. (E) PM integrity assay of tcb3Δ cells complemented with Tcb3 truncation mutants upon 10-min incubation at 42°C. The plot shows average values (white/gray bars) for each condition ± SE (error bars). n.s., ∗ , ∗∗ , and ∗∗∗ , respectively, indicate p > 0.05, p < 0.05, p < 0.01, and p < 0.001 by unpaired t test. Four independent biological repeats were performed for all conditions. (F) Model for the function of cER peaks in maintaining PM integrity. In WT cells, Tcbs generate membrane peaks of extreme curvature on the cER membrane. This may facilitate the extraction of cER lipids and their delivery to the PM (top left). The generation of cER peaks is the main structural role of Tcbs at ER-PM MCS, as overall ER-PM tethering is not substantially affected by Tcb1/2/3 deletion. However, tcb1/2/3Δ cells lack cER peaks (bottom left). Under heat stress, influx of extracellular Ca 2+ through a damaged PM drives the localized formation of additional Tcb-mediated cER peaks, which in turn facilitate sufficient delivery of cER lipids to the PM to maintain PM integrity (top right). Absence of cER peaks in heat stressed tcb1/2/3Δ cells leads to PM integrity defects allowing influx of propidium iodide (bottom right). See also Figure S4 ; .

Article Snippet: The contrast of A, S2D, 6A, 6B, and 6C was enhanced using a deconvolution filter ( https://github.com/dtegunov/tom_deconv ) executed in MATLAB (MathWorks) using the functionalities of the TOM toolbox ( ).

Techniques: Clinical Proteomics, Membrane, MANN-WHITNEY, Integrity Assay, Incubation, Extraction