tataa-sequence Search Results


core promoter sequences (e.g., tataa boxes)  (TATAA Biocenter AB)
90
TATAA Biocenter AB core promoter sequences (e.g., tataa boxes)
Core Promoter Sequences (E.G., Tataa Boxes), supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/core+promoter+sequences++e+g+++tataa+boxes+/us11976291-660-21-25
Average 90 stars, based on 1 article reviews
core promoter sequences (e.g., tataa boxes) - by Bioz Stars, 2026-10
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box sequence repeat  (TATAA Biocenter AB)
90
TATAA Biocenter AB box sequence repeat
Box Sequence Repeat, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/box+sequence+repeat/pmc06693044-178-26-26
Average 90 stars, based on 1 article reviews
box sequence repeat - by Bioz Stars, 2026-10
90/100 stars
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mutant oligonucleotides in the consensus 50- tataa-30 sequence (m2, m5 and m6)  (TATAA Biocenter AB)
90
TATAA Biocenter AB mutant oligonucleotides in the consensus 50- tataa-30 sequence (m2, m5 and m6)
Mutant Oligonucleotides In The Consensus 50 Tataa 30 Sequence (M2, M5 And M6), supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/tata+consensus+sequence/pm28557347-139-1-7
Average 90 stars, based on 1 article reviews
mutant oligonucleotides in the consensus 50- tataa-30 sequence (m2, m5 and m6) - by Bioz Stars, 2026-10
90/100 stars
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core promoter sequences tataa boxes  (TATAA Biocenter AB)
90
TATAA Biocenter AB core promoter sequences tataa boxes
Core Promoter Sequences Tataa Boxes, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/tataa+sequence/us11866719-652-21-25
Average 90 stars, based on 1 article reviews
core promoter sequences tataa boxes - by Bioz Stars, 2026-10
90/100 stars
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cy3 sequence tataa  (TATAA Biocenter AB)
90
TATAA Biocenter AB cy3 sequence tataa
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Cy3 Sequence Tataa, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/cy3+sequence+tataa/pmc03143128-177-3-7
Average 90 stars, based on 1 article reviews
cy3 sequence tataa - by Bioz Stars, 2026-10
90/100 stars
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tataa(7890) sequence  (TATAA Biocenter AB)
90
TATAA Biocenter AB tataa(7890) sequence
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Tataa(7890) Sequence, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/tataa+7890++sequence/10__1128_slash_jvi__00921___08-179-2-5
Average 90 stars, based on 1 article reviews
tataa(7890) sequence - by Bioz Stars, 2026-10
90/100 stars
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short sequence tataa  (TATAA Biocenter AB)
90
TATAA Biocenter AB short sequence tataa
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Short Sequence Tataa, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/short+sequence+tataa/pmc11430490-198-2-3
Average 90 stars, based on 1 article reviews
short sequence tataa - by Bioz Stars, 2026-10
90/100 stars
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p61 tataa sequence  (TATAA Biocenter AB)
90
TATAA Biocenter AB p61 tataa sequence
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
P61 Tataa Sequence, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/p61+tataa+sequence/10__1128_slash_jvi__75__3__1325___1331__2001-202-2-3
Average 90 stars, based on 1 article reviews
p61 tataa sequence - by Bioz Stars, 2026-10
90/100 stars
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promoter binding sequences  (TATAA Biocenter AB)
90
TATAA Biocenter AB promoter binding sequences
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Promoter Binding Sequences, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/promoter+binding+sequence/us11787851-1220-1-4
Average 90 stars, based on 1 article reviews
promoter binding sequences - by Bioz Stars, 2026-10
90/100 stars
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primer sets  (TATAA Biocenter AB)
90
TATAA Biocenter AB primer sets
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Primer Sets, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/primer+sequences/10__3892_slash_or_00000283-85-13-19
Average 90 stars, based on 1 article reviews
primer sets - by Bioz Stars, 2026-10
90/100 stars
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guide rnas specific to the tataa box and flanking sequence in the tnf core promoter  (TATAA Biocenter AB)
90
TATAA Biocenter AB guide rnas specific to the tataa box and flanking sequence in the tnf core promoter
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Guide Rnas Specific To The Tataa Box And Flanking Sequence In The Tnf Core Promoter, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/guide+rnas+specific+to+the+tataa+box+and+flanking+sequence+in+the+tnf+core+promoter/us10765664-391-10-7
Average 90 stars, based on 1 article reviews
guide rnas specific to the tataa box and flanking sequence in the tnf core promoter - by Bioz Stars, 2026-10
90/100 stars
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tataa-box motif  (TATAA Biocenter AB)
90
TATAA Biocenter AB tataa-box motif
(A) Fluorescence intensity of <t>Cy3</t> and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The <t>fluorescent</t> range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.
Tataa Box Motif, supplied by TATAA Biocenter AB, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/tataa-sequence/tataa+box+sequence/pmc03730108-127-65-65
Average 90 stars, based on 1 article reviews
tataa-box motif - by Bioz Stars, 2026-10
90/100 stars
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Image Search Results


(A) Fluorescence intensity of Cy3 and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The fluorescent range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.

Journal: PLoS ONE

Article Title: Sequence-Dependent Fluorescence of Cyanine Dyes on Microarrays

doi: 10.1371/journal.pone.0022177

Figure Lengend Snippet: (A) Fluorescence intensity of Cy3 and Cy5 end-labeled 5-mers, ranked from most to least intense. The Cy3 curve drops by about half of the maximum intensity, while the Cy5 curve drops by about two-thirds. The shape of the curves suggests that the intensity range for both dyes will increase with additional sequence length. However the insets, which each plot the four N x T 5-x subsets of the same data, preserve the inverse sigmoidal shape, and the trend can be extrapolated to indicate a small additional range for Cy3. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers 5′-end-labeled using (B) Cy3 and (C) Cy5, synthesized simultaneously on a microarray. The fluorescent range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.

Article Snippet: The second most fluorescent Cy3 sequence is TATAA , which has essentially the same intensity as the first place sequence GAAAA (see ).

Techniques: Fluorescence, Labeling, Sequencing, Synthesized, Microarray

Normalized relative fluorescence intensity of the ten brightest and darkest 5-mers 5′-labeled with Cy3 or Cy5 phosphoramidites.

Journal: PLoS ONE

Article Title: Sequence-Dependent Fluorescence of Cyanine Dyes on Microarrays

doi: 10.1371/journal.pone.0022177

Figure Lengend Snippet: Normalized relative fluorescence intensity of the ten brightest and darkest 5-mers 5′-labeled with Cy3 or Cy5 phosphoramidites.

Article Snippet: The second most fluorescent Cy3 sequence is TATAA , which has essentially the same intensity as the first place sequence GAAAA (see ).

Techniques: Fluorescence

(A) Fluorescence intensity of Cy3 and Cy5 end-labeled 5-mers, ranked from most to least intense. The fluorescence intensity of the Cy3-streptavidin-biotin conjugate drops by about 75% of maximum intensity over the range of sequences; in the case of Cy5, the intensity drops by about 95%. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers with 5′-biotin and labeled using (B) streptavidin-Cy3 conjugation and (C) streptavidin-Cy5 conjugation. The fluorescent range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.

Journal: PLoS ONE

Article Title: Sequence-Dependent Fluorescence of Cyanine Dyes on Microarrays

doi: 10.1371/journal.pone.0022177

Figure Lengend Snippet: (A) Fluorescence intensity of Cy3 and Cy5 end-labeled 5-mers, ranked from most to least intense. The fluorescence intensity of the Cy3-streptavidin-biotin conjugate drops by about 75% of maximum intensity over the range of sequences; in the case of Cy5, the intensity drops by about 95%. Fluorescence intensity consensus sequences of all 1024 DNA 5-mers with 5′-biotin and labeled using (B) streptavidin-Cy3 conjugation and (C) streptavidin-Cy5 conjugation. The fluorescent range was equally divided into eight bins of equal intensity range, and the consensus sequence for all the 5-mers in each bin is plotted for each octile.

Article Snippet: The second most fluorescent Cy3 sequence is TATAA , which has essentially the same intensity as the first place sequence GAAAA (see ).

Techniques: Fluorescence, Labeling, Conjugation Assay, Sequencing

(A) Intensity distribution for Cy3 and Cy5 end-labeled 5-mers divided into 16 bins of equal intensity range. The histograms have been fitted with Gaussian functions (Cy3: A = 119, x 0 = 8.0, σ = 3.5; Cy5: A = 138, x 0 = 9.4, σ = 3.0). (B) Effect of purine vs. pyrimidine content of 5-mers on the normalized intensity of Cy3- and Cy5-labels. The horizontal lines represent the intensity of the least fluorescent Cy3 and Cy5 end-labeled 5-mers.

Journal: PLoS ONE

Article Title: Sequence-Dependent Fluorescence of Cyanine Dyes on Microarrays

doi: 10.1371/journal.pone.0022177

Figure Lengend Snippet: (A) Intensity distribution for Cy3 and Cy5 end-labeled 5-mers divided into 16 bins of equal intensity range. The histograms have been fitted with Gaussian functions (Cy3: A = 119, x 0 = 8.0, σ = 3.5; Cy5: A = 138, x 0 = 9.4, σ = 3.0). (B) Effect of purine vs. pyrimidine content of 5-mers on the normalized intensity of Cy3- and Cy5-labels. The horizontal lines represent the intensity of the least fluorescent Cy3 and Cy5 end-labeled 5-mers.

Article Snippet: The second most fluorescent Cy3 sequence is TATAA , which has essentially the same intensity as the first place sequence GAAAA (see ).

Techniques: Labeling

Normalized relative fluorescence intensity of the ten brightest and darkest 5-mers with 5′-biotin and labeled with streptavidin-Cy3 or -Cy5.

Journal: PLoS ONE

Article Title: Sequence-Dependent Fluorescence of Cyanine Dyes on Microarrays

doi: 10.1371/journal.pone.0022177

Figure Lengend Snippet: Normalized relative fluorescence intensity of the ten brightest and darkest 5-mers with 5′-biotin and labeled with streptavidin-Cy3 or -Cy5.

Article Snippet: The second most fluorescent Cy3 sequence is TATAA , which has essentially the same intensity as the first place sequence GAAAA (see ).

Techniques: Fluorescence, Labeling

Nucleobase order based on relative fluorescence intensity for the 5-mer homopolymer sequence subset for each of the four labeling methods, as well as relative intensity and rank.

Journal: PLoS ONE

Article Title: Sequence-Dependent Fluorescence of Cyanine Dyes on Microarrays

doi: 10.1371/journal.pone.0022177

Figure Lengend Snippet: Nucleobase order based on relative fluorescence intensity for the 5-mer homopolymer sequence subset for each of the four labeling methods, as well as relative intensity and rank.

Article Snippet: The second most fluorescent Cy3 sequence is TATAA , which has essentially the same intensity as the first place sequence GAAAA (see ).

Techniques: Fluorescence, Sequencing, Labeling