Journal: Frontiers in Microbiology

Article Title: Genomic Surveillance and Phylodynamic Analyses Reveal the Emergence of Novel Mutations and Co-mutation Patterns Within SARS-CoV-2 Variants Prevalent in India

doi: 10.3389/fmicb.2021.703933

Figure Lengend Snippet: Association of specific mutations with the status of the COVID-19 patients from India, Europe, and North America. A heat map of mutations and their frequencies that were found to be associated with four different categories of the status of the COVID-19 patients—deceased (D), symptomatic (S), mild (M), and asymptomatic (A), respectively—is shown.

Article Snippet: The RT-PCR assay was performed using SD Biosensor COVID-19 kit based on Taqman probe chemistry for the detection of SARS-CoV-2 RDRP gene and E gene using reverse transcription in Rotor Gene Q 5 plex HRM system.

Techniques:

Journal: Frontiers in Microbiology

Article Title: Genomic Surveillance and Phylodynamic Analyses Reveal the Emergence of Novel Mutations and Co-mutation Patterns Within SARS-CoV-2 Variants Prevalent in India

doi: 10.3389/fmicb.2021.703933

Figure Lengend Snippet: Association of specific co-mutation patterns with the status of the COVID-19 patients from India. The frequencies of specific co-mutations are plotted with respect to the four status categories of COVID-19 patients: deceased, symptomatic, mild, and asymptomatic, respectively. G, GH, GR, and S clades defining mutations are marked in yellow, blue, red, and purple, respectively.

Article Snippet: The RT-PCR assay was performed using SD Biosensor COVID-19 kit based on Taqman probe chemistry for the detection of SARS-CoV-2 RDRP gene and E gene using reverse transcription in Rotor Gene Q 5 plex HRM system.

Techniques: Mutagenesis