sze selection Search Results


  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 96
    ATCC p putida kt2440
    Gene ontology analysis of the significantly differentially expressed genes between exponential growth and stationary phase of P. <t>putida</t> <t>KT2440</t> relA / spoT mutant cultivation
    P Putida Kt2440, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 159 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/p putida kt2440/product/ATCC
    Average 96 stars, based on 159 article reviews
    Price from $9.99 to $1999.99
    p putida kt2440 - by Bioz Stars, 2020-08
    96/100 stars
      Buy from Supplier

    98
    Millipore imipenem selected strains
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Imipenem Selected Strains, supplied by Millipore, used in various techniques. Bioz Stars score: 98/100, based on 12 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/imipenem selected strains/product/Millipore
    Average 98 stars, based on 12 article reviews
    Price from $9.99 to $1999.99
    imipenem selected strains - by Bioz Stars, 2020-08
    98/100 stars
      Buy from Supplier

    99
    Sage Science sagescience bluepippin system
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Sagescience Bluepippin System, supplied by Sage Science, used in various techniques. Bioz Stars score: 99/100, based on 7 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/sagescience bluepippin system/product/Sage Science
    Average 99 stars, based on 7 article reviews
    Price from $9.99 to $1999.99
    sagescience bluepippin system - by Bioz Stars, 2020-08
    99/100 stars
      Buy from Supplier

    93
    Tanabe 10 1016 s0896 6273
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    10 1016 S0896 6273, supplied by Tanabe, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/10 1016 s0896 6273/product/Tanabe
    Average 93 stars, based on 1 article reviews
    Price from $9.99 to $1999.99
    10 1016 s0896 6273 - by Bioz Stars, 2020-08
    93/100 stars
      Buy from Supplier

    99
    Qiagen qiagen qiaquick columns
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Qiagen Qiaquick Columns, supplied by Qiagen, used in various techniques. Bioz Stars score: 99/100, based on 357 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/qiagen qiaquick columns/product/Qiagen
    Average 99 stars, based on 357 article reviews
    Price from $9.99 to $1999.99
    qiagen qiaquick columns - by Bioz Stars, 2020-08
    99/100 stars
      Buy from Supplier

    99
    Millipore efflux pump inhibitor carbonyl cyanide 3 chlorophenylhydrazone cccp
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Efflux Pump Inhibitor Carbonyl Cyanide 3 Chlorophenylhydrazone Cccp, supplied by Millipore, used in various techniques. Bioz Stars score: 99/100, based on 12 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/efflux pump inhibitor carbonyl cyanide 3 chlorophenylhydrazone cccp/product/Millipore
    Average 99 stars, based on 12 article reviews
    Price from $9.99 to $1999.99
    efflux pump inhibitor carbonyl cyanide 3 chlorophenylhydrazone cccp - by Bioz Stars, 2020-08
    99/100 stars
      Buy from Supplier

    85
    Tanabe sokolchik i
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Sokolchik I, supplied by Tanabe, used in various techniques. Bioz Stars score: 85/100, based on 4 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/sokolchik i/product/Tanabe
    Average 85 stars, based on 4 article reviews
    Price from $9.99 to $1999.99
    sokolchik i - by Bioz Stars, 2020-08
    85/100 stars
      Buy from Supplier

    85
    Tanabe sokolchik
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Sokolchik, supplied by Tanabe, used in various techniques. Bioz Stars score: 85/100, based on 3 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/sokolchik/product/Tanabe
    Average 85 stars, based on 3 article reviews
    Price from $9.99 to $1999.99
    sokolchik - by Bioz Stars, 2020-08
    85/100 stars
      Buy from Supplier

    89
    Medicago model plant medicago truncatula gaertn
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Model Plant Medicago Truncatula Gaertn, supplied by Medicago, used in various techniques. Bioz Stars score: 89/100, based on 64 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/model plant medicago truncatula gaertn/product/Medicago
    Average 89 stars, based on 64 article reviews
    Price from $9.99 to $1999.99
    model plant medicago truncatula gaertn - by Bioz Stars, 2020-08
    89/100 stars
      Buy from Supplier

    97
    ATCC cell culture llc cell line
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Cell Culture Llc Cell Line, supplied by ATCC, used in various techniques. Bioz Stars score: 97/100, based on 2 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/cell culture llc cell line/product/ATCC
    Average 97 stars, based on 2 article reviews
    Price from $9.99 to $1999.99
    cell culture llc cell line - by Bioz Stars, 2020-08
    97/100 stars
      Buy from Supplier

    99
    Illumina Inc dna library preparation
    Constant monitoring of <t>imipenem</t> susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.
    Dna Library Preparation, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 689 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/dna library preparation/product/Illumina Inc
    Average 99 stars, based on 689 article reviews
    Price from $9.99 to $1999.99
    dna library preparation - by Bioz Stars, 2020-08
    99/100 stars
      Buy from Supplier

    89
    ATCC monkey kidney cos7 fibroblasts
    Induction of TPC6A and TIAF1 aggregation upon knockdown of endogenous WOX1 by siRNA (A–C) <t>COS7</t> cells were transfected with expression plasmid constructs for EYFP-TPC6AΔ, EYFP-TIAF1, or EYFP, in the presence of one of the siRNA-expressing constructs, including scramble, WOX1si, TIAF1si and TPC6Asi. 24 hours later, protein aggregation was examined by fluorescent microscopy (~150 cells counted). Data are shown in duplicates for (A) and (B). (D) Tabulated data is shown.
    Monkey Kidney Cos7 Fibroblasts, supplied by ATCC, used in various techniques. Bioz Stars score: 89/100, based on 25 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/monkey kidney cos7 fibroblasts/product/ATCC
    Average 89 stars, based on 25 article reviews
    Price from $9.99 to $1999.99
    monkey kidney cos7 fibroblasts - by Bioz Stars, 2020-08
    89/100 stars
      Buy from Supplier

    99
    Illumina Inc nextera xt library preparation protocol
    Induction of TPC6A and TIAF1 aggregation upon knockdown of endogenous WOX1 by siRNA (A–C) <t>COS7</t> cells were transfected with expression plasmid constructs for EYFP-TPC6AΔ, EYFP-TIAF1, or EYFP, in the presence of one of the siRNA-expressing constructs, including scramble, WOX1si, TIAF1si and TPC6Asi. 24 hours later, protein aggregation was examined by fluorescent microscopy (~150 cells counted). Data are shown in duplicates for (A) and (B). (D) Tabulated data is shown.
    Nextera Xt Library Preparation Protocol, supplied by Illumina Inc, used in various techniques. Bioz Stars score: 99/100, based on 101 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/nextera xt library preparation protocol/product/Illumina Inc
    Average 99 stars, based on 101 article reviews
    Price from $9.99 to $1999.99
    nextera xt library preparation protocol - by Bioz Stars, 2020-08
    99/100 stars
      Buy from Supplier

    Image Search Results


    Gene ontology analysis of the significantly differentially expressed genes between exponential growth and stationary phase of P. putida KT2440 relA / spoT mutant cultivation

    Journal: AMB Express

    Article Title: Medium-chain-length polyhydroxyalkanoates synthesis by Pseudomonas putida KT2440 relA/spoT mutant: bioprocess characterization and transcriptome analysis

    doi: 10.1186/s13568-017-0396-z

    Figure Lengend Snippet: Gene ontology analysis of the significantly differentially expressed genes between exponential growth and stationary phase of P. putida KT2440 relA / spoT mutant cultivation

    Article Snippet: Bacterial strain and growth conditions Cells of P. putida KT2440 (ATCC® 47054™), P. putida KT2440 rpoN mutant (Köhler et al. ), and P. putida KT2440 relA /spoT (Sze et al. ) mutant were taken from a deep-frozen stock and grown overnight in Luria–Bertani broth (1% w/v tryptone, 0.5% w/v yeast extract, 1% NaCl) with shaking at 30 °C with 200 rpm for 24 h before inoculation.

    Techniques: Mutagenesis

    Mcl-PHAs content and biomass concentration of Pseudomonas putida KT2440 wild-type ( 1 and 2 ), P. putida KT2440 relA / spoT mutant ( 3 and 4 ) and P. putida KT2440 rpoN mutant ( 5 and 6 ). The shake flasks cultivation was performed under nitrogen limitation ( 1 , 3 , and 5 ) and optimal ( 2 , 4 , and 6 ) conditions. Each data represents the mean ± standard deviation

    Journal: AMB Express

    Article Title: Medium-chain-length polyhydroxyalkanoates synthesis by Pseudomonas putida KT2440 relA/spoT mutant: bioprocess characterization and transcriptome analysis

    doi: 10.1186/s13568-017-0396-z

    Figure Lengend Snippet: Mcl-PHAs content and biomass concentration of Pseudomonas putida KT2440 wild-type ( 1 and 2 ), P. putida KT2440 relA / spoT mutant ( 3 and 4 ) and P. putida KT2440 rpoN mutant ( 5 and 6 ). The shake flasks cultivation was performed under nitrogen limitation ( 1 , 3 , and 5 ) and optimal ( 2 , 4 , and 6 ) conditions. Each data represents the mean ± standard deviation

    Article Snippet: Bacterial strain and growth conditions Cells of P. putida KT2440 (ATCC® 47054™), P. putida KT2440 rpoN mutant (Köhler et al. ), and P. putida KT2440 relA /spoT (Sze et al. ) mutant were taken from a deep-frozen stock and grown overnight in Luria–Bertani broth (1% w/v tryptone, 0.5% w/v yeast extract, 1% NaCl) with shaking at 30 °C with 200 rpm for 24 h before inoculation.

    Techniques: Concentration Assay, Mutagenesis, Standard Deviation

    Growth and mcl-PHAs accumulation during 48 h cultivation of P. putida KT2440 relA/spoT mutant in bioreactor

    Journal: AMB Express

    Article Title: Medium-chain-length polyhydroxyalkanoates synthesis by Pseudomonas putida KT2440 relA/spoT mutant: bioprocess characterization and transcriptome analysis

    doi: 10.1186/s13568-017-0396-z

    Figure Lengend Snippet: Growth and mcl-PHAs accumulation during 48 h cultivation of P. putida KT2440 relA/spoT mutant in bioreactor

    Article Snippet: Bacterial strain and growth conditions Cells of P. putida KT2440 (ATCC® 47054™), P. putida KT2440 rpoN mutant (Köhler et al. ), and P. putida KT2440 relA /spoT (Sze et al. ) mutant were taken from a deep-frozen stock and grown overnight in Luria–Bertani broth (1% w/v tryptone, 0.5% w/v yeast extract, 1% NaCl) with shaking at 30 °C with 200 rpm for 24 h before inoculation.

    Techniques: Mutagenesis

    The result of quantitative real-time reverse transcription PCR analysis of phaG gene. Samples were taken during cultivation of P. putida KT2440 relA / spoT mutant in bioreactor

    Journal: AMB Express

    Article Title: Medium-chain-length polyhydroxyalkanoates synthesis by Pseudomonas putida KT2440 relA/spoT mutant: bioprocess characterization and transcriptome analysis

    doi: 10.1186/s13568-017-0396-z

    Figure Lengend Snippet: The result of quantitative real-time reverse transcription PCR analysis of phaG gene. Samples were taken during cultivation of P. putida KT2440 relA / spoT mutant in bioreactor

    Article Snippet: Bacterial strain and growth conditions Cells of P. putida KT2440 (ATCC® 47054™), P. putida KT2440 rpoN mutant (Köhler et al. ), and P. putida KT2440 relA /spoT (Sze et al. ) mutant were taken from a deep-frozen stock and grown overnight in Luria–Bertani broth (1% w/v tryptone, 0.5% w/v yeast extract, 1% NaCl) with shaking at 30 °C with 200 rpm for 24 h before inoculation.

    Techniques: Polymerase Chain Reaction, Mutagenesis

    Constant monitoring of imipenem susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.

    Journal: Infection and Drug Resistance

    Article Title: Overproduction of efflux pumps caused reduced susceptibility to carbapenem under consecutive imipenem-selected stress in Acinetobacter baumannii

    doi: 10.2147/IDR.S151423

    Figure Lengend Snippet: Constant monitoring of imipenem susceptibility pattern of SZE strain using Kirby–Bauer agar diffusion method in 58 subcultivations. The white triangle dotted line shows diameter with an efflux pump inhibitor, and the black triangle dotted line indicates diameter without an efflux pump inhibitor. The smooth line indicates diameter of the zone of 13 mm, which is the breakpoint of imipenem resistance according to the guidelines of the CLSI. Abbreviations: EI, efflux pump inhibitor; AST, antimicrobial susceptibility testing; CLSI, Clinical Laboratory Standards Institute.

    Article Snippet: To determine the contribution of efflux pumps in SZE strain and its imipenem-selected strains, efflux pump inhibition test was carried out on MH agar plates with and without the efflux pump inhibitor carbonyl cyanide 3-chlorophenylhydrazone (CCCP) (Sigma-Aldrich Co., St. Louis, MO, USA).

    Techniques: Diffusion-based Assay, AST Assay

    Changes in the relative expression of genes of efflux pump families, outer membrane proteins, and bla OXA-51 under the stress of imipenem resistance between G1, G10, G20, and G45 strains. ( A ) Genes of the RND family of efflux pumps ( adeB , adeG , and adeJ ) in G1, G10, G20, and G45; ( B ) genes of the MATE family of efflux pumps ( abeM ), SMR family of efflux pumps ( abeS ), genes of the MFS family of efflux pumps ( craA , amvA , and tetB ); and ( C ) outer membrane protein genes ( ompA , ompW , omp33 , oprD , and carO ) and bla OXA-51 . * p

    Journal: Infection and Drug Resistance

    Article Title: Overproduction of efflux pumps caused reduced susceptibility to carbapenem under consecutive imipenem-selected stress in Acinetobacter baumannii

    doi: 10.2147/IDR.S151423

    Figure Lengend Snippet: Changes in the relative expression of genes of efflux pump families, outer membrane proteins, and bla OXA-51 under the stress of imipenem resistance between G1, G10, G20, and G45 strains. ( A ) Genes of the RND family of efflux pumps ( adeB , adeG , and adeJ ) in G1, G10, G20, and G45; ( B ) genes of the MATE family of efflux pumps ( abeM ), SMR family of efflux pumps ( abeS ), genes of the MFS family of efflux pumps ( craA , amvA , and tetB ); and ( C ) outer membrane protein genes ( ompA , ompW , omp33 , oprD , and carO ) and bla OXA-51 . * p

    Article Snippet: To determine the contribution of efflux pumps in SZE strain and its imipenem-selected strains, efflux pump inhibition test was carried out on MH agar plates with and without the efflux pump inhibitor carbonyl cyanide 3-chlorophenylhydrazone (CCCP) (Sigma-Aldrich Co., St. Louis, MO, USA).

    Techniques: Expressing

    Induction of TPC6A and TIAF1 aggregation upon knockdown of endogenous WOX1 by siRNA (A–C) COS7 cells were transfected with expression plasmid constructs for EYFP-TPC6AΔ, EYFP-TIAF1, or EYFP, in the presence of one of the siRNA-expressing constructs, including scramble, WOX1si, TIAF1si and TPC6Asi. 24 hours later, protein aggregation was examined by fluorescent microscopy (~150 cells counted). Data are shown in duplicates for (A) and (B). (D) Tabulated data is shown.

    Journal: Oncotarget

    Article Title: Trafficking protein particle complex 6A delta (TRAPPC6AΔ) is an extracellular plaque-forming protein in the brain

    doi:

    Figure Lengend Snippet: Induction of TPC6A and TIAF1 aggregation upon knockdown of endogenous WOX1 by siRNA (A–C) COS7 cells were transfected with expression plasmid constructs for EYFP-TPC6AΔ, EYFP-TIAF1, or EYFP, in the presence of one of the siRNA-expressing constructs, including scramble, WOX1si, TIAF1si and TPC6Asi. 24 hours later, protein aggregation was examined by fluorescent microscopy (~150 cells counted). Data are shown in duplicates for (A) and (B). (D) Tabulated data is shown.

    Article Snippet: Cell lines, chemicals and human postmortem hippocampal tissues Cell lines used in these studies were monkey kidney COS7 fibroblasts, human neuroblastoma SK-N-SH cells (American Type Culture Collection), and isolated primary rat glial cells.

    Techniques: Transfection, Expressing, Plasmid Preparation, Construct, Microscopy