simplot Search Results


simplot 3.5.1  (Simplot Science)
90
Simplot Science simplot 3.5.1
Simplot 3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
simplot 3.5.1 - by Bioz Stars, 2026-03
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bootscan  (Simplot Science)
90
Simplot Science bootscan
Bootscan, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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bootscan - by Bioz Stars, 2026-03
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version 3.5.1 program  (Simplot Science)
90
Simplot Science version 3.5.1 program
Version 3.5.1 Program, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
version 3.5.1 program - by Bioz Stars, 2026-03
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innate potato  (Simplot Science)
90
Simplot Science innate potato
Innate Potato, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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innate potato - by Bioz Stars, 2026-03
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talen sdn1  (Simplot Science)
90
Simplot Science talen sdn1
Talen Sdn1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 90 stars, based on 1 article reviews
talen sdn1 - by Bioz Stars, 2026-03
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bootscan analysis  (Simplot Science)
90
Simplot Science bootscan analysis
Similarity analysis ( a ) and <t>BootScan</t> analysis ( b ) on the putative recombinant JP/Nagasaki/2013 strain. Reference strains JP/Wakayama/2003 (GI-13, green) and JP/Shimane/98 (GI-19, blue) strains were used as putative parental strains. Additionally, the M41 strain (G1-1, red) was used as an outlier sequence. The y -axis indicates the percentage of identity within a 200-bp wide sliding window centered on the plotted position, with a step size of 20 bp between plots.
Bootscan Analysis, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscan analysis/product/Simplot Science
Average 90 stars, based on 1 article reviews
bootscan analysis - by Bioz Stars, 2026-03
90/100 stars
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software version 3.5.1  (Simplot Science)
90
Simplot Science software version 3.5.1
Sequence similarity scanning and recombination analysis of deltacoronaviruses from the cloaca of birds. A Sequence similarity scanning of the 6 coronavirus genomes against the related coronavirus genomes within Deltacoronavirus genus using Simplot software version 3.5.1. Different strains are presented by lines in different colors which are shown on the right side. B Bayesian inference trees based on putative exchanged genomic regions. The stain names of genomes acquired here are marked with red color. Each scale bar indicates the amino acid substitutions per site
Software Version 3.5.1, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/software version 3.5.1/product/Simplot Science
Average 90 stars, based on 1 article reviews
software version 3.5.1 - by Bioz Stars, 2026-03
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simplot bootscan analysis  (Simplot Science)
90
Simplot Science simplot bootscan analysis
Whole genome Simplot <t>BootScan</t> analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.
Simplot Bootscan Analysis, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/simplot bootscan analysis/product/Simplot Science
Average 90 stars, based on 1 article reviews
simplot bootscan analysis - by Bioz Stars, 2026-03
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similarity plot  (Simplot Science)
90
Simplot Science similarity plot
Whole genome Simplot <t>BootScan</t> analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.
Similarity Plot, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/similarity plot/product/Simplot Science
Average 90 stars, based on 1 article reviews
similarity plot - by Bioz Stars, 2026-03
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bootscan program  (Simplot Science)
90
Simplot Science bootscan program
Whole genome Simplot <t>BootScan</t> analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.
Bootscan Program, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/bootscan program/product/Simplot Science
Average 90 stars, based on 1 article reviews
bootscan program - by Bioz Stars, 2026-03
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bird’s eye  (Simplot Science)
90
Simplot Science bird’s eye
Whole genome Simplot <t>BootScan</t> analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.
Bird’s Eye, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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bird’s eye - by Bioz Stars, 2026-03
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canned john west salmon tempters  (Simplot Science)
90
Simplot Science canned john west salmon tempters
Whole genome Simplot <t>BootScan</t> analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.
Canned John West Salmon Tempters, supplied by Simplot Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Similarity analysis ( a ) and BootScan analysis ( b ) on the putative recombinant JP/Nagasaki/2013 strain. Reference strains JP/Wakayama/2003 (GI-13, green) and JP/Shimane/98 (GI-19, blue) strains were used as putative parental strains. Additionally, the M41 strain (G1-1, red) was used as an outlier sequence. The y -axis indicates the percentage of identity within a 200-bp wide sliding window centered on the plotted position, with a step size of 20 bp between plots.

Journal: Viruses

Article Title: Genetic Analysis of the Complete S1 Gene in Japanese Infectious Bronchitis Virus Strains

doi: 10.3390/v14040716

Figure Lengend Snippet: Similarity analysis ( a ) and BootScan analysis ( b ) on the putative recombinant JP/Nagasaki/2013 strain. Reference strains JP/Wakayama/2003 (GI-13, green) and JP/Shimane/98 (GI-19, blue) strains were used as putative parental strains. Additionally, the M41 strain (G1-1, red) was used as an outlier sequence. The y -axis indicates the percentage of identity within a 200-bp wide sliding window centered on the plotted position, with a step size of 20 bp between plots.

Article Snippet: Subsequently, BootScan analysis was conducted, employing a subprogram embedded in SimPlot, in addition to signals of 70% or more of the observed permuted trees to indicate potential recombination events [ , ].

Techniques: Recombinant, Sequencing

Sequence similarity scanning and recombination analysis of deltacoronaviruses from the cloaca of birds. A Sequence similarity scanning of the 6 coronavirus genomes against the related coronavirus genomes within Deltacoronavirus genus using Simplot software version 3.5.1. Different strains are presented by lines in different colors which are shown on the right side. B Bayesian inference trees based on putative exchanged genomic regions. The stain names of genomes acquired here are marked with red color. Each scale bar indicates the amino acid substitutions per site

Journal: Microbiome

Article Title: Virome in the cloaca of wild and breeding birds revealed a diversity of significant viruses

doi: 10.1186/s40168-022-01246-7

Figure Lengend Snippet: Sequence similarity scanning and recombination analysis of deltacoronaviruses from the cloaca of birds. A Sequence similarity scanning of the 6 coronavirus genomes against the related coronavirus genomes within Deltacoronavirus genus using Simplot software version 3.5.1. Different strains are presented by lines in different colors which are shown on the right side. B Bayesian inference trees based on putative exchanged genomic regions. The stain names of genomes acquired here are marked with red color. Each scale bar indicates the amino acid substitutions per site

Article Snippet: A Sequence similarity scanning of the 6 coronavirus genomes against the related coronavirus genomes within Deltacoronavirus genus using Simplot software version 3.5.1.

Techniques: Sequencing, Software, Staining

Whole genome Simplot BootScan analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.

Journal: Viruses

Article Title: Clinical, Laboratory, and Molecular Epidemiology of an Outbreak of Aseptic Meningitis Due to a Triple-Recombinant Echovirus in Ashburton, New Zealand

doi: 10.3390/v14040658

Figure Lengend Snippet: Whole genome Simplot BootScan analysis with the query sequence of strain NZ/Ashburton/17WQ2027G/2017-08-20 (accession number MW586892) compared to Echovirus E6 (accession number KP289439), E11 (accession number KP294524), and E30 (accession number KY888274) reference sequences. ( A ) Similarity plot analysis, ( B ) Bootscanning analysis on the putative recombinant strain and its parental sequences. The enterovirus genomic organization is shown in the top.

Article Snippet: An additional Simplot BootScan analysis of an alignment of the NZ Echovirus E30 MW586892 with available whole genome sequences of the enterovirus prototype strains described in [ ] is presented in .

Techniques: Sequencing, Recombinant