rna libraries Search Results


nebnext single cell low input rna library prep kit  (New England Biolabs)
96
New England Biolabs nebnext single cell low input rna library prep kit
Nebnext Single Cell Low Input Rna Library Prep Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nebnext single cell low input rna library prep kit/product/New England Biolabs
Average 96 stars, based on 1 article reviews
nebnext single cell low input rna library prep kit - by Bioz Stars, 2026-04
96/100 stars
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e607318 mgieasy rna toolkit mgi  (Complete Genomics Inc)
97
Complete Genomics Inc e607318 mgieasy rna toolkit mgi
E607318 Mgieasy Rna Toolkit Mgi, supplied by Complete Genomics Inc, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/e607318 mgieasy rna toolkit mgi/product/Complete Genomics Inc
Average 97 stars, based on 1 article reviews
e607318 mgieasy rna toolkit mgi - by Bioz Stars, 2026-04
97/100 stars
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nebnext ultra ii rna library preparation kit  (New England Biolabs)
99
New England Biolabs nebnext ultra ii rna library preparation kit
Nebnext Ultra Ii Rna Library Preparation Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nebnext ultra ii rna library preparation kit/product/New England Biolabs
Average 99 stars, based on 1 article reviews
nebnext ultra ii rna library preparation kit - by Bioz Stars, 2026-04
99/100 stars
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nebnext ultra ii directional rna library prep kit  (New England Biolabs)
99
New England Biolabs nebnext ultra ii directional rna library prep kit
Nebnext Ultra Ii Directional Rna Library Prep Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nebnext ultra ii directional rna library prep kit/product/New England Biolabs
Average 99 stars, based on 1 article reviews
nebnext ultra ii directional rna library prep kit - by Bioz Stars, 2026-04
99/100 stars
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e7765s  (New England Biolabs)
96
New England Biolabs e7765s
E7765s, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/e7765s/product/New England Biolabs
Average 96 stars, based on 1 article reviews
e7765s - by Bioz Stars, 2026-04
96/100 stars
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mgieasy rna directional library prep set  (Complete Genomics Inc)
96
Complete Genomics Inc mgieasy rna directional library prep set
Mgieasy Rna Directional Library Prep Set, supplied by Complete Genomics Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mgieasy rna directional library prep set/product/Complete Genomics Inc
Average 96 stars, based on 1 article reviews
mgieasy rna directional library prep set - by Bioz Stars, 2026-04
96/100 stars
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xgentm broad range rna library prep kit  (Danaher Inc)
91
Danaher Inc xgentm broad range rna library prep kit
Xgentm Broad Range Rna Library Prep Kit, supplied by Danaher Inc, used in various techniques. Bioz Stars score: 91/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/xgentm broad range rna library prep kit/product/Danaher Inc
Average 91 stars, based on 1 article reviews
xgentm broad range rna library prep kit - by Bioz Stars, 2026-04
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transcription stoppage sites  (New England Biolabs)
96
New England Biolabs transcription stoppage sites
A. A DNA library of 1 million templates that contain 100% of all possible 11-mers is used as input for pooled in vitro <t>transcription</t> (IVT) using different manufacturing processes to create eight IVT-RNA pools. B. Oxford Nanopore Technology Sequencing is used to quantify full-length, (untruncated) DNA and IVT-RNA templates (3 and 8 pools, respectively). The sequencing depths generated are used to calculate a pseudoyield (PY), representative of the amount of full-length (untruncated) IVT-RNA produced per DNA template. C. PY values from the 1M DNA library are used to train, validate and test a Multi-scale Attention Projection Network (MAP-Net), that accurately predicts the PY of unknown DNA templates. MAP-Net is then used within a Genetic Algorithm that generates new synonymously mutated templates with different predicted PY for any DNA template. D. The MAP-Net-based genetic algorithm is used on DNA templates for two real-world mRNA products, hSpCas9 and XBB.8 Spike, generating for each 4 synonymous templates with predicted PYs higher (2) and lower (2) than the starting template. Yields measured for full-length transcripts in individual IVT experiments validate MAP-Net PY predictions. E . The same Genetic Algorithm is now used with MAP-Net and RiboNN as fitness functions to co-optimize the Wuhan Spike sequence for translatability and manufacturability, and results are compared with commercial SARS-COV-2 vaccine sequences.
Transcription Stoppage Sites, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/transcription stoppage sites/product/New England Biolabs
Average 96 stars, based on 1 article reviews
transcription stoppage sites - by Bioz Stars, 2026-04
96/100 stars
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nebnext ultraexpress rna library prep kit  (New England Biolabs)
97
New England Biolabs nebnext ultraexpress rna library prep kit
A. A DNA library of 1 million templates that contain 100% of all possible 11-mers is used as input for pooled in vitro <t>transcription</t> (IVT) using different manufacturing processes to create eight IVT-RNA pools. B. Oxford Nanopore Technology Sequencing is used to quantify full-length, (untruncated) DNA and IVT-RNA templates (3 and 8 pools, respectively). The sequencing depths generated are used to calculate a pseudoyield (PY), representative of the amount of full-length (untruncated) IVT-RNA produced per DNA template. C. PY values from the 1M DNA library are used to train, validate and test a Multi-scale Attention Projection Network (MAP-Net), that accurately predicts the PY of unknown DNA templates. MAP-Net is then used within a Genetic Algorithm that generates new synonymously mutated templates with different predicted PY for any DNA template. D. The MAP-Net-based genetic algorithm is used on DNA templates for two real-world mRNA products, hSpCas9 and XBB.8 Spike, generating for each 4 synonymous templates with predicted PYs higher (2) and lower (2) than the starting template. Yields measured for full-length transcripts in individual IVT experiments validate MAP-Net PY predictions. E . The same Genetic Algorithm is now used with MAP-Net and RiboNN as fitness functions to co-optimize the Wuhan Spike sequence for translatability and manufacturability, and results are compared with commercial SARS-COV-2 vaccine sequences.
Nebnext Ultraexpress Rna Library Prep Kit, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 97/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nebnext ultraexpress rna library prep kit/product/New England Biolabs
Average 97 stars, based on 1 article reviews
nebnext ultraexpress rna library prep kit - by Bioz Stars, 2026-04
97/100 stars
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mgieasy fast rna library prep set  (Complete Genomics Inc)
96
Complete Genomics Inc mgieasy fast rna library prep set
A. A DNA library of 1 million templates that contain 100% of all possible 11-mers is used as input for pooled in vitro <t>transcription</t> (IVT) using different manufacturing processes to create eight IVT-RNA pools. B. Oxford Nanopore Technology Sequencing is used to quantify full-length, (untruncated) DNA and IVT-RNA templates (3 and 8 pools, respectively). The sequencing depths generated are used to calculate a pseudoyield (PY), representative of the amount of full-length (untruncated) IVT-RNA produced per DNA template. C. PY values from the 1M DNA library are used to train, validate and test a Multi-scale Attention Projection Network (MAP-Net), that accurately predicts the PY of unknown DNA templates. MAP-Net is then used within a Genetic Algorithm that generates new synonymously mutated templates with different predicted PY for any DNA template. D. The MAP-Net-based genetic algorithm is used on DNA templates for two real-world mRNA products, hSpCas9 and XBB.8 Spike, generating for each 4 synonymous templates with predicted PYs higher (2) and lower (2) than the starting template. Yields measured for full-length transcripts in individual IVT experiments validate MAP-Net PY predictions. E . The same Genetic Algorithm is now used with MAP-Net and RiboNN as fitness functions to co-optimize the Wuhan Spike sequence for translatability and manufacturability, and results are compared with commercial SARS-COV-2 vaccine sequences.
Mgieasy Fast Rna Library Prep Set, supplied by Complete Genomics Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mgieasy fast rna library prep set/product/Complete Genomics Inc
Average 96 stars, based on 1 article reviews
mgieasy fast rna library prep set - by Bioz Stars, 2026-04
96/100 stars
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nebnext multiplex small rna library prep set  (New England Biolabs)
96
New England Biolabs nebnext multiplex small rna library prep set
A. A DNA library of 1 million templates that contain 100% of all possible 11-mers is used as input for pooled in vitro <t>transcription</t> (IVT) using different manufacturing processes to create eight IVT-RNA pools. B. Oxford Nanopore Technology Sequencing is used to quantify full-length, (untruncated) DNA and IVT-RNA templates (3 and 8 pools, respectively). The sequencing depths generated are used to calculate a pseudoyield (PY), representative of the amount of full-length (untruncated) IVT-RNA produced per DNA template. C. PY values from the 1M DNA library are used to train, validate and test a Multi-scale Attention Projection Network (MAP-Net), that accurately predicts the PY of unknown DNA templates. MAP-Net is then used within a Genetic Algorithm that generates new synonymously mutated templates with different predicted PY for any DNA template. D. The MAP-Net-based genetic algorithm is used on DNA templates for two real-world mRNA products, hSpCas9 and XBB.8 Spike, generating for each 4 synonymous templates with predicted PYs higher (2) and lower (2) than the starting template. Yields measured for full-length transcripts in individual IVT experiments validate MAP-Net PY predictions. E . The same Genetic Algorithm is now used with MAP-Net and RiboNN as fitness functions to co-optimize the Wuhan Spike sequence for translatability and manufacturability, and results are compared with commercial SARS-COV-2 vaccine sequences.
Nebnext Multiplex Small Rna Library Prep Set, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/nebnext multiplex small rna library prep set/product/New England Biolabs
Average 96 stars, based on 1 article reviews
nebnext multiplex small rna library prep set - by Bioz Stars, 2026-04
96/100 stars
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Image Search Results


A. A DNA library of 1 million templates that contain 100% of all possible 11-mers is used as input for pooled in vitro transcription (IVT) using different manufacturing processes to create eight IVT-RNA pools. B. Oxford Nanopore Technology Sequencing is used to quantify full-length, (untruncated) DNA and IVT-RNA templates (3 and 8 pools, respectively). The sequencing depths generated are used to calculate a pseudoyield (PY), representative of the amount of full-length (untruncated) IVT-RNA produced per DNA template. C. PY values from the 1M DNA library are used to train, validate and test a Multi-scale Attention Projection Network (MAP-Net), that accurately predicts the PY of unknown DNA templates. MAP-Net is then used within a Genetic Algorithm that generates new synonymously mutated templates with different predicted PY for any DNA template. D. The MAP-Net-based genetic algorithm is used on DNA templates for two real-world mRNA products, hSpCas9 and XBB.8 Spike, generating for each 4 synonymous templates with predicted PYs higher (2) and lower (2) than the starting template. Yields measured for full-length transcripts in individual IVT experiments validate MAP-Net PY predictions. E . The same Genetic Algorithm is now used with MAP-Net and RiboNN as fitness functions to co-optimize the Wuhan Spike sequence for translatability and manufacturability, and results are compared with commercial SARS-COV-2 vaccine sequences.

Journal: bioRxiv

Article Title: A Universal, AI-based Design Framework for Efficient Manufacturing of mRNA Therapeutics

doi: 10.64898/2026.03.09.710039

Figure Lengend Snippet: A. A DNA library of 1 million templates that contain 100% of all possible 11-mers is used as input for pooled in vitro transcription (IVT) using different manufacturing processes to create eight IVT-RNA pools. B. Oxford Nanopore Technology Sequencing is used to quantify full-length, (untruncated) DNA and IVT-RNA templates (3 and 8 pools, respectively). The sequencing depths generated are used to calculate a pseudoyield (PY), representative of the amount of full-length (untruncated) IVT-RNA produced per DNA template. C. PY values from the 1M DNA library are used to train, validate and test a Multi-scale Attention Projection Network (MAP-Net), that accurately predicts the PY of unknown DNA templates. MAP-Net is then used within a Genetic Algorithm that generates new synonymously mutated templates with different predicted PY for any DNA template. D. The MAP-Net-based genetic algorithm is used on DNA templates for two real-world mRNA products, hSpCas9 and XBB.8 Spike, generating for each 4 synonymous templates with predicted PYs higher (2) and lower (2) than the starting template. Yields measured for full-length transcripts in individual IVT experiments validate MAP-Net PY predictions. E . The same Genetic Algorithm is now used with MAP-Net and RiboNN as fitness functions to co-optimize the Wuhan Spike sequence for translatability and manufacturability, and results are compared with commercial SARS-COV-2 vaccine sequences.

Article Snippet: To prepare libraries for Illumina sequencing in order to determine transcription stoppage sites, a modified version of NEB small RNA library preparation (E7330) protocol was adopted.

Techniques: In Vitro, Sequencing, Generated, Produced

A : GO term enrichment of the 100 primary transcripts in the human transcriptome with the lowest manufacturability score; shown are the 4 terms with the most significant p-values. B, C : distribution of transcription initiation rates (b) or transcription elongation rates (c) for primary human transcripts with top or bottom 10% predicted PY. D : Predicted PY and TE in the human transcriptome for 19761 primary transcripts from the ENSEMBL database; dotted lines delimit low-medium-high manufacturability (gray) and translatability (orange); numbers in each cell indicate the corresponding number of human transcripts. E : Predicted PY and TE for different codon optimizations of the Spike protein CDS from the SARS-CoV-2 Wuhan-Hu-1strain; wild type sequence (black), codon-optimized sequences using seven commercial software products (grey, see Methods 10.4), BioNTech (orange) and Moderna (blue) commercial vaccine sequences, co-optimized sequences using a genetic algorithm based on MAP-Net and RiboNN (green).

Journal: bioRxiv

Article Title: A Universal, AI-based Design Framework for Efficient Manufacturing of mRNA Therapeutics

doi: 10.64898/2026.03.09.710039

Figure Lengend Snippet: A : GO term enrichment of the 100 primary transcripts in the human transcriptome with the lowest manufacturability score; shown are the 4 terms with the most significant p-values. B, C : distribution of transcription initiation rates (b) or transcription elongation rates (c) for primary human transcripts with top or bottom 10% predicted PY. D : Predicted PY and TE in the human transcriptome for 19761 primary transcripts from the ENSEMBL database; dotted lines delimit low-medium-high manufacturability (gray) and translatability (orange); numbers in each cell indicate the corresponding number of human transcripts. E : Predicted PY and TE for different codon optimizations of the Spike protein CDS from the SARS-CoV-2 Wuhan-Hu-1strain; wild type sequence (black), codon-optimized sequences using seven commercial software products (grey, see Methods 10.4), BioNTech (orange) and Moderna (blue) commercial vaccine sequences, co-optimized sequences using a genetic algorithm based on MAP-Net and RiboNN (green).

Article Snippet: To prepare libraries for Illumina sequencing in order to determine transcription stoppage sites, a modified version of NEB small RNA library preparation (E7330) protocol was adopted.

Techniques: Sequencing, Software